Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032058
CDS Infomation

pacid=37469129 polypeptide=PGSC0003DMP400021774 locus=PGSC0003DMG400012305 ID=PGSC0003DMT400032058.v4.03 annot-version=v4.03
Sequence

ATGGACCAACAAACCATGTTGTCTAGTGGTGTTAAGTATACTGAACACAGAAAGCAAATC
ACTATGGTTAGAGCATCAGCTCCAGTGAGTTTTACTGGTCGGAGGAGAGGCTCTGAGATG
AATGCTGCTGGTCCTAGAGTTGTACGGATTACTGTCACTGATGCTGATGCTACTGACTCT
TCAAGTGATGAAGGGGAACAGAGGTTTTATGGCCGTCAAAGAGTGAGAAAATTTGTGAAT
GAAGTTCGAATAGAGCAGAGCAGCAACTGTAATGGAAGTGTAAATGGGGTTTTGAGAAAT
GGGTCGTCGTCGGAAACTGCTCCCGTTGTCGCTGCACCACCAAAAAGGCGGAAGAAGAAC
GCCGGAGCAACGACGGCGGCGAGTAAGCTAAAAGTGAACAATGTTAAAAAGTTTCGCGGC
GTACGGCAACGGCCTTGGGGCAAATGGGCGGCAGAAATCAGAGATCCACTGAGACGTGTA
CGGTTATGGTTAGGCACTTACGATACTGCTGAAGAAGCTGCCATGGTTTATGACCACGCG
GCTATTCAGCTACGTGGACCTGACGCGCTCACAAACTTCGCCACTCCTCCGGCGACGAAA
ACCAGCTGCTCCGGCTACAACTCCGGTGAAGAATCCCACAACGATCAACGCTCGCCGAAG
TCCGTTCTCCGGTGTGCTTCAACTTCATTTGATGAATCTCAGAATAACGAAGAAGCTGAA
GCTGAGTCATTACCGATTTTACCCTCCGATATCAGGGACAAAAATGACATTTCCATGTCG
GAAAACTTCTGCGATTTTCCACCGTTTGAGAGTTTCTTCCCCGACGATTTGTTTCAGTTC
GAGAACCCGGTTACCATATCCGACTTGTTTGAACCGATTACTTTACCCGACTGCAATAAC
ATGTTATTCGGGTCAAGTACTACTGATTTCGGTTTCGGATCTTCATCTTGGCCCGAAGAA
GATTTCTTTCAGGATTTCGGAGATGTATTCGGGTCTGACCCGCTTGTGGCTCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400021774
PEP Infomation

pacid=37469129 transcript=PGSC0003DMT400032058 locus=PGSC0003DMG400012305 ID=PGSC0003DMT400032058.v4.03 annot-version=v4.03
Sequence

MDQQTMLSSGVKYTEHRKQITMVRASAPVSFTGRRRGSEMNAAGPRVVRITVTDADATDS
SSDEGEQRFYGRQRVRKFVNEVRIEQSSNCNGSVNGVLRNGSSSETAPVVAAPPKRRKKN
AGATTAASKLKVNNVKKFRGVRQRPWGKWAAEIRDPLRRVRLWLGTYDTAEEAAMVYDHA
AIQLRGPDALTNFATPPATKTSCSGYNSGEESHNDQRSPKSVLRCASTSFDESQNNEEAE
AESLPILPSDIRDKNDISMSENFCDFPPFESFFPDDLFQFENPVTISDLFEPITLPDCNN
MLFGSSTTDFGFGSSSWPEEDFFQDFGDVFGSDPLVAL*

Transcript Sequence

Transcript ID

PGSC0003DMT400032058
Transcript Infomation

pacid=37469129 locus=PGSC0003DMG400012305 ID=PGSC0003DMT400032058.v4.03 annot-version=v4.03
Sequence

ATGGACCAACAAACCATGTTGTCTAGTGGTGTTAAGTATACTGAACACAGAAAGCAAATC
ACTATGGTTAGAGCATCAGCTCCAGTGAGTTTTACTGGTCGGAGGAGAGGCTCTGAGATG
AATGCTGCTGGTCCTAGAGTTGTACGGATTACTGTCACTGATGCTGATGCTACTGACTCT
TCAAGTGATGAAGGGGAACAGAGGTTTTATGGCCGTCAAAGAGTGAGAAAATTTGTGAAT
GAAGTTCGAATAGAGCAGAGCAGCAACTGTAATGGAAGTGTAAATGGGGTTTTGAGAAAT
GGGTCGTCGTCGGAAACTGCTCCCGTTGTCGCTGCACCACCAAAAAGGCGGAAGAAGAAC
GCCGGAGCAACGACGGCGGCGAGTAAGCTAAAAGTGAACAATGTTAAAAAGTTTCGCGGC
GTACGGCAACGGCCTTGGGGCAAATGGGCGGCAGAAATCAGAGATCCACTGAGACGTGTA
CGGTTATGGTTAGGCACTTACGATACTGCTGAAGAAGCTGCCATGGTTTATGACCACGCG
GCTATTCAGCTACGTGGACCTGACGCGCTCACAAACTTCGCCACTCCTCCGGCGACGAAA
ACCAGCTGCTCCGGCTACAACTCCGGTGAAGAATCCCACAACGATCAACGCTCGCCGAAG
TCCGTTCTCCGGTGTGCTTCAACTTCATTTGATGAATCTCAGAATAACGAAGAAGCTGAA
GCTGAGTCATTACCGATTTTACCCTCCGATATCAGGGACAAAAATGACATTTCCATGTCG
GAAAACTTCTGCGATTTTCCACCGTTTGAGAGTTTCTTCCCCGACGATTTGTTTCAGTTC
GAGAACCCGGTTACCATATCCGACTTGTTTGAACCGATTACTTTACCCGACTGCAATAAC
ATGTTATTCGGGTCAAGTACTACTGATTTCGGTTTCGGATCTTCATCTTGGCCCGAAGAA
GATTTCTTTCAGGATTTCGGAGATGTATTCGGGTCTGACCCGCTTGTGGCTCTTTGA