Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032049
CDS Infomation

pacid=37469317 polypeptide=PGSC0003DMP400021766 locus=PGSC0003DMG400012298 ID=PGSC0003DMT400032049.v4.03 annot-version=v4.03
Sequence

ATGGCTACTGTTGTTGAAATGACTCTTCCCTCCGACGCTGTCCCCGCTAAGAAGGGGAAG
TCTAGGAAGGTGCTGAAGCAGAAAAAACAGTCGTCGAATGAAGCCAATATACTGGCTGGA
ACTGTAGTTCAGTCGCCTTCCGTGGTGTTGCCTGTGGATGATTCTGTTAAAGAGAATGTT
GATCCACAATCCCAGAAGAAATCGAACAAGAGAGGGGCCTCAAAGGCGGCGAAGCAGCAG
ATGGAGCAGAGTTCTTTTGAGAAAGAGTTGTTAGAAATGCAAGAAAAGCTTAAGAAGATG
ACACTTGAGAAGGAGCAGACTGAGGAAATGTTGAAAGCTAGAGAGGAAATGCTGAAGCAG
AAGGAGGAAGAGCTCGAAGTGCGAGGTAAAGACCATGAGAAGCTTCAGACTGAACTCAAA
AAGCTGCAGAAAATGAAAGAGTTCAAACCTACCTTGAATTTCCCTATTGTGCAATCGCTG
AGAGACAAAGAGGAAAAGAAAGAGAAGAAAAAGGCGGATCCTTCGAAGAAAAGGCCAGTA
CCGCCTTACCTATTGTGGTGCAAAGACCAATGGAATGAGGTGAAAAAAGCTAATCCAAAT
GCTGAGTTCAAGGAGATGGCCAATTTATTGGGTGCTAAGTGGAAAACAGTAAGTGCAGAA
GAGAAAAAACCTTATGAGGAAAAATACCAAGCTGAGAAAGAAGTATACTTGAAAATCGTT
GGAATGGAGAAGCGCGAACATGAAGCGATGAGACTCTTGGATGACGAGCAGAAACAAAAG
ACAGCTATGGAGTTACTTGAACAATACATTCAGTTTCAGCAAGAAGCAATAGTGAATGAA
AACAAGAAGAAAAAGAAAGAAAAGGACCCCTTGAAACCAAAACAACCTTTATCAGCATTT
TTCCTGTTTACAAATGAGCGTCGATCTGCTCTGCTTGCTGAGAACAACAACAATGTGAAG
GAGGTGGCGAAGATTACTGGTGAAGAGTGGAAGAACATGACAGAGCAACAAAAAGCACCC
TATGAGGAGATGGCAATGAAGAAAAAGGAGAAATATTTGCAAGAAATGGAAGTTTATAAG
AAGAAAAAAGACGAAGAAGCTGCTGTACACATGAAGGAAGAGGAGGAATCGATGAAACTC
AAGAAGCAAGAAGCACTTCAATTGCTCAAAAAGAAAGAAAAGACAGAAAATTTGATCAAG
AAAACGAAAGAAAATCGCCAAAAGAAGAAACAAAAGGATGACAATGTGGATCCTAACAAA
CCAAAGAAGCCTGCTTCGTCATTCTTTCGTTTCAGTAGAGAGGAAAGAAAGAAACTAGTC
GAAGAGCGTCCTGGAATTAACAATTCTACCATTAATGCTCTCATTTCACTGAAATGGAAG
GTAGAATTCCTTTTTGACACGGCCTTTCACCATTTCCGTATTTTCTGTATACTACTTTGT
GTTTTCATTGAGTTTGAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400021766
PEP Infomation

pacid=37469317 transcript=PGSC0003DMT400032049 locus=PGSC0003DMG400012298 ID=PGSC0003DMT400032049.v4.03 annot-version=v4.03
Sequence

MATVVEMTLPSDAVPAKKGKSRKVLKQKKQSSNEANILAGTVVQSPSVVLPVDDSVKENV
DPQSQKKSNKRGASKAAKQQMEQSSFEKELLEMQEKLKKMTLEKEQTEEMLKAREEMLKQ
KEEELEVRGKDHEKLQTELKKLQKMKEFKPTLNFPIVQSLRDKEEKKEKKKADPSKKRPV
PPYLLWCKDQWNEVKKANPNAEFKEMANLLGAKWKTVSAEEKKPYEEKYQAEKEVYLKIV
GMEKREHEAMRLLDDEQKQKTAMELLEQYIQFQQEAIVNENKKKKKEKDPLKPKQPLSAF
FLFTNERRSALLAENNNNVKEVAKITGEEWKNMTEQQKAPYEEMAMKKKEKYLQEMEVYK
KKKDEEAAVHMKEEEESMKLKKQEALQLLKKKEKTENLIKKTKENRQKKKQKDDNVDPNK
PKKPASSFFRFSREERKKLVEERPGINNSTINALISLKWKVEFLFDTAFHHFRIFCILLC
VFIEFE*

Transcript Sequence

Transcript ID

PGSC0003DMT400032049
Transcript Infomation

pacid=37469317 locus=PGSC0003DMG400012298 ID=PGSC0003DMT400032049.v4.03 annot-version=v4.03
Sequence

ATGGCTACTGTTGTTGAAATGACTCTTCCCTCCGACGCTGTCCCCGCTAAGAAGGGGAAG
TCTAGGAAGGTGCTGAAGCAGAAAAAACAGTCGTCGAATGAAGCCAATATACTGGCTGGA
ACTGTAGTTCAGTCGCCTTCCGTGGTGTTGCCTGTGGATGATTCTGTTAAAGAGAATGTT
GATCCACAATCCCAGAAGAAATCGAACAAGAGAGGGGCCTCAAAGGCGGCGAAGCAGCAG
ATGGAGCAGAGTTCTTTTGAGAAAGAGTTGTTAGAAATGCAAGAAAAGCTTAAGAAGATG
ACACTTGAGAAGGAGCAGACTGAGGAAATGTTGAAAGCTAGAGAGGAAATGCTGAAGCAG
AAGGAGGAAGAGCTCGAAGTGCGAGGTAAAGACCATGAGAAGCTTCAGACTGAACTCAAA
AAGCTGCAGAAAATGAAAGAGTTCAAACCTACCTTGAATTTCCCTATTGTGCAATCGCTG
AGAGACAAAGAGGAAAAGAAAGAGAAGAAAAAGGCGGATCCTTCGAAGAAAAGGCCAGTA
CCGCCTTACCTATTGTGGTGCAAAGACCAATGGAATGAGGTGAAAAAAGCTAATCCAAAT
GCTGAGTTCAAGGAGATGGCCAATTTATTGGGTGCTAAGTGGAAAACAGTAAGTGCAGAA
GAGAAAAAACCTTATGAGGAAAAATACCAAGCTGAGAAAGAAGTATACTTGAAAATCGTT
GGAATGGAGAAGCGCGAACATGAAGCGATGAGACTCTTGGATGACGAGCAGAAACAAAAG
ACAGCTATGGAGTTACTTGAACAATACATTCAGTTTCAGCAAGAAGCAATAGTGAATGAA
AACAAGAAGAAAAAGAAAGAAAAGGACCCCTTGAAACCAAAACAACCTTTATCAGCATTT
TTCCTGTTTACAAATGAGCGTCGATCTGCTCTGCTTGCTGAGAACAACAACAATGTGAAG
GAGGTGGCGAAGATTACTGGTGAAGAGTGGAAGAACATGACAGAGCAACAAAAAGCACCC
TATGAGGAGATGGCAATGAAGAAAAAGGAGAAATATTTGCAAGAAATGGAAGTTTATAAG
AAGAAAAAAGACGAAGAAGCTGCTGTACACATGAAGGAAGAGGAGGAATCGATGAAACTC
AAGAAGCAAGAAGCACTTCAATTGCTCAAAAAGAAAGAAAAGACAGAAAATTTGATCAAG
AAAACGAAAGAAAATCGCCAAAAGAAGAAACAAAAGGATGACAATGTGGATCCTAACAAA
CCAAAGAAGCCTGCTTCGTCATTCTTTCGTTTCAGTAGAGAGGAAAGAAAGAAACTAGTC
GAAGAGCGTCCTGGAATTAACAATTCTACCATTAATGCTCTCATTTCACTGAAATGGAAG
GTAGAATTCCTTTTTGACACGGCCTTTCACCATTTCCGTATTTTCTGTATACTACTTTGT
GTTTTCATTGAGTTTGAGTAG