Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031965
CDS Infomation

pacid=37468943 polypeptide=PGSC0003DMP400021708 locus=PGSC0003DMG400012261 ID=PGSC0003DMT400031965.v4.03 annot-version=v4.03
Sequence

ATGGCAAGTAAAAATGGGTGTTATCAGTCTCAGCAGAAGAAAAATTCATCAGGTAAAGAT
GATCTGTATCATGAGCTATGGCAGTTGTGTGCAGGTCCAATAGTGGATGTTCCAAAGGAA
GGAGAAAGTGTTTATTATTTTCCACAAGGCCACATGGAACAATTGGTAGCATCAATTAAT
CAAGAAATGGATCAAAGAGTTCCATCATTCAATCTCAAATCAAAGATCCTTTGTAGAGTT
ATCAACAGTCATTTCCTGGCTGAGGAAGATAATGATGAGGTCTATGTCCAGATCACTTTG
ATGCCAGAGGCACCAGATAAAGCCGAGCCGACTAATCCTGATCCGTTCCTTCCGGAGCCT
GTAAAGCCTAAAGTCCATTCTTTCTGCAAGGTTCTGACTGCCTCCGATACAAGCACTCAT
GGTGGATTTTCTGTTCTAAGGAAACATGCTAATGAATGCCTTCCTCCCTTGGACATGAAC
CAGCAGATTCCGACCCAGGAATTGATTGCGAAAGACCTTCATGACATGGAGTGGCACTTC
AAGCATATATTTAGAGGCCAACCTCGGAGACATTTACTTACCACAGGGTGGAGTAACTTT
GTTTCTTCAAAGAGATTAGTGGCAGGGGATTCTTTTGTATTCTTAAGGGGTGATAATGGA
GAACTACGAGTTGGGGTCAGACGGCTTGTTCGCCAGCAGAGCTCAATGCCGTCATCGGTG
ATATCAAGCCAGAGCATGCACCTAGGAGTCTTAGCTACAGCATCTCATGCTGTTACAACC
CAGACCTTGTTTGTTGTTTACTACAAACCGAGAACCACTCAGTTCATCGTAAGCCTCAAC
AAATACTTGGAGGCTGTTAATCATGGATATTCAGTTGGCATGCGATTTAAAATGCAGTTT
GAAGCGGAAGAGAATCCTGATAGAAGATTTATGGGCACTATAGTTGGGGTTGATGATCTT
TCCTCACAGTGGAAAGATTCTGCGTGGCGATCCTTGAAGGTTCGATGGGACGAGCCTGCA
GCCATTGCAAGGCCTGACAGAGTTTCTCCTTGGGAAATCGAACCTTATGTGTCTTCAATT
CCAAATGCCCTTGTCCCACCAACCGCAGGGAAGAACAAAAGGCATCGGCTACATAGTGAA
ATCAAAATATCAGAACCTGCATCCTCAATTGCGTCAGCAGTTTGGAATCCTTCCCTCGAC
TCGCCTCAGTTTAACACCTCTGGCATCAACAGCAGTACTAATTGCACATTAACGTCTCGT
ACAGAGAGTGGTTGGCCGCTTCCTCATTTAAATACTGCAGGTATGCTTGTGGATGAGACA
GAAGACAGTAGAAGTGCTTCAACTTGGTGTGGTTTTCCATGCGTTTTGGCCCCGCAATTC
GGTCAAGGGACTAATCAGCCGATTGTTATTCCTACTGATGAGAGAAAATGTAATACCAAA
ACAACCTGTAGATTATTTGGTATTGACTTGAAAAAAACCTCAATTAGCACTACTGAGGCA
CTACTACCGCCACAGCCAGCCGACATTTCTCGTGTCTCCGCAGAGAGAGCGCCTCCAAAC
ATGGCGCCTGCTGGTGATTCAGATCAAAAGTCTGACCTTTCAGTAGACTTCAAAGATCAA
ATGCAAGGCCATTTGCGGTTACCCCTAAAGGAGGTTCAAAGCAAGCAGAGTTGTTCCACC
AGGTCTCGCACAAAGGTGCAAATGCAAGGCGTAGCTGTAGGTCGTGCAGTGGATTTAACC
ATATTGAAAGGATACAATGAGCTTACAAAGGAGCTTGAGGAGATGTTTGAAATCCAAGGA
GAGCTTCAGTCACGACAGAAATGGGGGATCTTGTTTACAGATGATGAAGGGGATACGATG
CTTATGGATGATTATCCGTGGCAAGACTTTTGCAATGTGGCGAGGAAAATTTTCATTTGT
TCAAGTCAAGATATGAAAAAATTGACCCTGTCTCGCGCAGACAGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021708
PEP Infomation

pacid=37468943 transcript=PGSC0003DMT400031965 locus=PGSC0003DMG400012261 ID=PGSC0003DMT400031965.v4.03 annot-version=v4.03
Sequence

MASKNGCYQSQQKKNSSGKDDLYHELWQLCAGPIVDVPKEGESVYYFPQGHMEQLVASIN
QEMDQRVPSFNLKSKILCRVINSHFLAEEDNDEVYVQITLMPEAPDKAEPTNPDPFLPEP
VKPKVHSFCKVLTASDTSTHGGFSVLRKHANECLPPLDMNQQIPTQELIAKDLHDMEWHF
KHIFRGQPRRHLLTTGWSNFVSSKRLVAGDSFVFLRGDNGELRVGVRRLVRQQSSMPSSV
ISSQSMHLGVLATASHAVTTQTLFVVYYKPRTTQFIVSLNKYLEAVNHGYSVGMRFKMQF
EAEENPDRRFMGTIVGVDDLSSQWKDSAWRSLKVRWDEPAAIARPDRVSPWEIEPYVSSI
PNALVPPTAGKNKRHRLHSEIKISEPASSIASAVWNPSLDSPQFNTSGINSSTNCTLTSR
TESGWPLPHLNTAGMLVDETEDSRSASTWCGFPCVLAPQFGQGTNQPIVIPTDERKCNTK
TTCRLFGIDLKKTSISTTEALLPPQPADISRVSAERAPPNMAPAGDSDQKSDLSVDFKDQ
MQGHLRLPLKEVQSKQSCSTRSRTKVQMQGVAVGRAVDLTILKGYNELTKELEEMFEIQG
ELQSRQKWGILFTDDEGDTMLMDDYPWQDFCNVARKIFICSSQDMKKLTLSRADS*

Transcript Sequence

Transcript ID

PGSC0003DMT400031965
Transcript Infomation

pacid=37468943 locus=PGSC0003DMG400012261 ID=PGSC0003DMT400031965.v4.03 annot-version=v4.03
Sequence

ATGGCAAGTAAAAATGGGTGTTATCAGTCTCAGCAGAAGAAAAATTCATCAGGTAAAGAT
GATCTGTATCATGAGCTATGGCAGTTGTGTGCAGGTCCAATAGTGGATGTTCCAAAGGAA
GGAGAAAGTGTTTATTATTTTCCACAAGGCCACATGGAACAATTGGTAGCATCAATTAAT
CAAGAAATGGATCAAAGAGTTCCATCATTCAATCTCAAATCAAAGATCCTTTGTAGAGTT
ATCAACAGTCATTTCCTGGCTGAGGAAGATAATGATGAGGTCTATGTCCAGATCACTTTG
ATGCCAGAGGCACCAGATAAAGCCGAGCCGACTAATCCTGATCCGTTCCTTCCGGAGCCT
GTAAAGCCTAAAGTCCATTCTTTCTGCAAGGTTCTGACTGCCTCCGATACAAGCACTCAT
GGTGGATTTTCTGTTCTAAGGAAACATGCTAATGAATGCCTTCCTCCCTTGGACATGAAC
CAGCAGATTCCGACCCAGGAATTGATTGCGAAAGACCTTCATGACATGGAGTGGCACTTC
AAGCATATATTTAGAGGCCAACCTCGGAGACATTTACTTACCACAGGGTGGAGTAACTTT
GTTTCTTCAAAGAGATTAGTGGCAGGGGATTCTTTTGTATTCTTAAGGGGTGATAATGGA
GAACTACGAGTTGGGGTCAGACGGCTTGTTCGCCAGCAGAGCTCAATGCCGTCATCGGTG
ATATCAAGCCAGAGCATGCACCTAGGAGTCTTAGCTACAGCATCTCATGCTGTTACAACC
CAGACCTTGTTTGTTGTTTACTACAAACCGAGAACCACTCAGTTCATCGTAAGCCTCAAC
AAATACTTGGAGGCTGTTAATCATGGATATTCAGTTGGCATGCGATTTAAAATGCAGTTT
GAAGCGGAAGAGAATCCTGATAGAAGATTTATGGGCACTATAGTTGGGGTTGATGATCTT
TCCTCACAGTGGAAAGATTCTGCGTGGCGATCCTTGAAGGTTCGATGGGACGAGCCTGCA
GCCATTGCAAGGCCTGACAGAGTTTCTCCTTGGGAAATCGAACCTTATGTGTCTTCAATT
CCAAATGCCCTTGTCCCACCAACCGCAGGGAAGAACAAAAGGCATCGGCTACATAGTGAA
ATCAAAATATCAGAACCTGCATCCTCAATTGCGTCAGCAGTTTGGAATCCTTCCCTCGAC
TCGCCTCAGTTTAACACCTCTGGCATCAACAGCAGTACTAATTGCACATTAACGTCTCGT
ACAGAGAGTGGTTGGCCGCTTCCTCATTTAAATACTGCAGGTATGCTTGTGGATGAGACA
GAAGACAGTAGAAGTGCTTCAACTTGGTGTGGTTTTCCATGCGTTTTGGCCCCGCAATTC
GGTCAAGGGACTAATCAGCCGATTGTTATTCCTACTGATGAGAGAAAATGTAATACCAAA
ACAACCTGTAGATTATTTGGTATTGACTTGAAAAAAACCTCAATTAGCACTACTGAGGCA
CTACTACCGCCACAGCCAGCCGACATTTCTCGTGTCTCCGCAGAGAGAGCGCCTCCAAAC
ATGGCGCCTGCTGGTGATTCAGATCAAAAGTCTGACCTTTCAGTAGACTTCAAAGATCAA
ATGCAAGGCCATTTGCGGTTACCCCTAAAGGAGGTTCAAAGCAAGCAGAGTTGTTCCACC
AGGTCTCGCACAAAGGTGCAAATGCAAGGCGTAGCTGTAGGTCGTGCAGTGGATTTAACC
ATATTGAAAGGATACAATGAGCTTACAAAGGAGCTTGAGGAGATGTTTGAAATCCAAGGA
GAGCTTCAGTCACGACAGAAATGGGGGATCTTGTTTACAGATGATGAAGGGGATACGATG
CTTATGGATGATTATCCGTGGCAAGACTTTTGCAATGTGGCGAGGAAAATTTTCATTTGT
TCAAGTCAAGATATGAAAAAATTGACCCTGTCTCGCGCAGACAGTTAA