Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031937
CDS Infomation

pacid=37469995 polypeptide=PGSC0003DMP400021684 locus=PGSC0003DMG400012254 ID=PGSC0003DMT400031937.v4.03 annot-version=v4.03
Sequence

ATGGCTGGCTGTTTGAGGCGAGGCAATTCACTCGTCGTGCTAACGATCGTTCTATTAGGC
TGTCTTTCTGCACTTTCCACTGCAAAAGAGGAGGCTACAAAACTTGGTACCGTTATAGGA
ATTGACCTTGGGACAACCTATTCCTGTGTTGGGGTGTATAAGAATGGTCATGTGGAGATT
ATAGCTAATGACCAAGGAAACAGGATTACACCATCATGGGTTGCATTCACTGATAACGAG
AGATTGATTGGTGAGGCTGCCAAGAACCTGGCTGCGGTCAACCCAGAAAGGACAATCTTT
GATGTTAAGAGGCTGATTGGAAGAAAATTTGAAGATAAGGAAGTACAGAGGGATATGAAG
CTGGTACCATACAAGATTATCAGCAAGGATGGAAAGCCCTACATACAAGTCAAAATCAAG
GATGGAGAAGTTAAGGTATTTAGTCCTGAGGAAATCAGTGCCATGATTTTGACAAAGATG
AAGGAGACAGCTGAAGCATTCCTTGGGAAGACTATTAAGGATGCTGTGGTCACTGTTCCT
GCATATTTCAATGACGCACAAAGACAGGCGACAAAGGATGCTGGTGTTATTGCTGGATTA
AATGTTGCTAGGATCATTAATGAGCCAACAGCTGCAGCCATTGCCTATGGACTGGACAAG
AAAGATGGTGAGAAGAACATTCTTGTCTTTGACCTTGGTGGTGGGACATTTGATGTCAGT
ATTCTGACCATTGACAATGGCGTGTTTGAGGTTCTTGCAACGAATGGTGACACCCATCTT
GGAGGTGAGGACTTTGATCAAAGGATTATGGAATACTTCATCAAGTTGATCAAGAAGAAG
CATGGAAAGGACATCAGCAAGGACAACAGAGCTCTTAGCAAGCTAAGGAGAGAAGCTGAG
CGTGCCAAGAGATCCCTTAGTAGCCAGCACCAAGTCCGGGTTGAGATTGAATCATTATTT
GATGGTACTGATTTCTCTGAACCATTGACCCGTGCTCGCTTTGAGGAGTTGAACAATGAT
CTCTTCAGAAAGACAATGGGACCTGTGAAGAAGGCAATGGATGATGCTGGGCTACAAAAG
AACCAGATTGATGAGATAGTTCTTGTTGGTGGAAGCACCAGAATTCCAAAGGTGCAACAG
CTCCTCAAAGACTATTTTGACGGGAAGGAGCCCAGCAAGGGTGTAAATCCTGATGAAGCA
GTTGCTTATGGTGCTGCTGTTCAAGGTGGTATCCTCAGTGGAGAGGGTGGAGACGAAACT
AAAGATATCCTTCTCCTGGATGTCGCTCCTCTCACCCTTGGTATTGAAACCGTTGGTGGT
GTGATGACCAAATTGATCCCCAGAAATACAGTTATCCCAACCAAGAAGTCCCAGGTCTTC
ACCACTTACCAAGACCAGCAGACCACTGTCTCCATTCAGGTTTTTGAAGGTGAAAGGAGT
CTTACCAAGGACTGTAGGAATCTTGGAAAGTTTGATCTCACTGGAATTCCTCCAGCTCCA
AGGGGAACCCCCCAAATTGAGGTCACATTCGAAGTTGATGCCAATGGCATCTTGAATGTC
AAAGCAGAAGACAAGGGTACTGGAAAAGCAGAGAAGATTACCATTACAAACGACAAGGGC
CGCTTAAGCCAAGAAGAGATTGAGCGTATGGTTCGTGAAGCAGAAGAGTTTGCTGAGGAA
GACAAGAAGGTGAAGGAGAAGATTGACGCCCGTAACGCTTTGGAAACCTACGTGTACAAC
ATGAAGAATCAAATCAACGACAAGGACAAGTTAGCTGACAAACTAGAGTCTGATGAGAAG
GAGAAGATTGAGACAGCAACGAAAGAAGCCCTTGAATGGCTAGACGATAACCAGAGCGCC
GAGAAAGAGGATTATGACGAGAAGCTCAAAGAGGTCGAGGCAGTTTGCAATCCAATCATC
ACAGCTGTTTATCAACGATCAGGTGGATCCCCAGGTGGTGGTGCATCGGAAGAAGAAGAT
GATGACAGCCATGATGAGCTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021684
PEP Infomation

pacid=37469995 transcript=PGSC0003DMT400031937 locus=PGSC0003DMG400012254 ID=PGSC0003DMT400031937.v4.03 annot-version=v4.03
Sequence

MAGCLRRGNSLVVLTIVLLGCLSALSTAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEI
IANDQGNRITPSWVAFTDNERLIGEAAKNLAAVNPERTIFDVKRLIGRKFEDKEVQRDMK
LVPYKIISKDGKPYIQVKIKDGEVKVFSPEEISAMILTKMKETAEAFLGKTIKDAVVTVP
AYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKDGEKNILVFDLGGGTFDVS
ILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALSKLRREAE
RAKRSLSSQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQK
NQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPSKGVNPDEAVAYGAAVQGGILSGEGGDET
KDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERS
LTKDCRNLGKFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKAEKITITNDKG
RLSQEEIERMVREAEEFAEEDKKVKEKIDARNALETYVYNMKNQINDKDKLADKLESDEK
EKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGSPGGGASEEED
DDSHDEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400031937
Transcript Infomation

pacid=37469995 locus=PGSC0003DMG400012254 ID=PGSC0003DMT400031937.v4.03 annot-version=v4.03
Sequence

ATGGCTGGCTGTTTGAGGCGAGGCAATTCACTCGTCGTGCTAACGATCGTTCTATTAGGC
TGTCTTTCTGCACTTTCCACTGCAAAAGAGGAGGCTACAAAACTTGGTACCGTTATAGGA
ATTGACCTTGGGACAACCTATTCCTGTGTTGGGGTGTATAAGAATGGTCATGTGGAGATT
ATAGCTAATGACCAAGGAAACAGGATTACACCATCATGGGTTGCATTCACTGATAACGAG
AGATTGATTGGTGAGGCTGCCAAGAACCTGGCTGCGGTCAACCCAGAAAGGACAATCTTT
GATGTTAAGAGGCTGATTGGAAGAAAATTTGAAGATAAGGAAGTACAGAGGGATATGAAG
CTGGTACCATACAAGATTATCAGCAAGGATGGAAAGCCCTACATACAAGTCAAAATCAAG
GATGGAGAAGTTAAGGTATTTAGTCCTGAGGAAATCAGTGCCATGATTTTGACAAAGATG
AAGGAGACAGCTGAAGCATTCCTTGGGAAGACTATTAAGGATGCTGTGGTCACTGTTCCT
GCATATTTCAATGACGCACAAAGACAGGCGACAAAGGATGCTGGTGTTATTGCTGGATTA
AATGTTGCTAGGATCATTAATGAGCCAACAGCTGCAGCCATTGCCTATGGACTGGACAAG
AAAGATGGTGAGAAGAACATTCTTGTCTTTGACCTTGGTGGTGGGACATTTGATGTCAGT
ATTCTGACCATTGACAATGGCGTGTTTGAGGTTCTTGCAACGAATGGTGACACCCATCTT
GGAGGTGAGGACTTTGATCAAAGGATTATGGAATACTTCATCAAGTTGATCAAGAAGAAG
CATGGAAAGGACATCAGCAAGGACAACAGAGCTCTTAGCAAGCTAAGGAGAGAAGCTGAG
CGTGCCAAGAGATCCCTTAGTAGCCAGCACCAAGTCCGGGTTGAGATTGAATCATTATTT
GATGGTACTGATTTCTCTGAACCATTGACCCGTGCTCGCTTTGAGGAGTTGAACAATGAT
CTCTTCAGAAAGACAATGGGACCTGTGAAGAAGGCAATGGATGATGCTGGGCTACAAAAG
AACCAGATTGATGAGATAGTTCTTGTTGGTGGAAGCACCAGAATTCCAAAGGTGCAACAG
CTCCTCAAAGACTATTTTGACGGGAAGGAGCCCAGCAAGGGTGTAAATCCTGATGAAGCA
GTTGCTTATGGTGCTGCTGTTCAAGGTGGTATCCTCAGTGGAGAGGGTGGAGACGAAACT
AAAGATATCCTTCTCCTGGATGTCGCTCCTCTCACCCTTGGTATTGAAACCGTTGGTGGT
GTGATGACCAAATTGATCCCCAGAAATACAGTTATCCCAACCAAGAAGTCCCAGGTCTTC
ACCACTTACCAAGACCAGCAGACCACTGTCTCCATTCAGGTTTTTGAAGGTGAAAGGAGT
CTTACCAAGGACTGTAGGAATCTTGGAAAGTTTGATCTCACTGGAATTCCTCCAGCTCCA
AGGGGAACCCCCCAAATTGAGGTCACATTCGAAGTTGATGCCAATGGCATCTTGAATGTC
AAAGCAGAAGACAAGGGTACTGGAAAAGCAGAGAAGATTACCATTACAAACGACAAGGGC
CGCTTAAGCCAAGAAGAGATTGAGCGTATGGTTCGTGAAGCAGAAGAGTTTGCTGAGGAA
GACAAGAAGGTGAAGGAGAAGATTGACGCCCGTAACGCTTTGGAAACCTACGTGTACAAC
ATGAAGAATCAAATCAACGACAAGGACAAGTTAGCTGACAAACTAGAGTCTGATGAGAAG
GAGAAGATTGAGACAGCAACGAAAGAAGCCCTTGAATGGCTAGACGATAACCAGAGCGCC
GAGAAAGAGGATTATGACGAGAAGCTCAAAGAGGTCGAGGCAGTTTGCAATCCAATCATC
ACAGCTGTTTATCAACGATCAGGTGGATCCCCAGGTGGTGGTGCATCGGAAGAAGAAGAT
GATGACAGCCATGATGAGCTGTAA