Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031936
CDS Infomation

pacid=37470813 polypeptide=PGSC0003DMP400021683 locus=PGSC0003DMG400012253 ID=PGSC0003DMT400031936.v4.03 annot-version=v4.03
Sequence

ATGACGGAAGTCGCGAGCAACGTTGTACACGAAATCCTAGGCAGACGAGCTCAAGATGTA
GATCAGCCTATTATCGACTATATTATCAATGTCGTCGCCGATGAAGATTTCGATTTTGGG
CACGACGGTGAAGGTGCTTTTGAAGCCCTTGGAGAGCTACTCGTCGATTCTGGTTGTGTT
ACTGACTTCTCCGAATGTCGTGCGGTTTGTAGCAAGTTGTCTGAGAAGTTAGAGAAGCAA
GAATTGGCTAAACCCCAACCGACGGTGAGAAGCTTAAAAATGCCGCTGAGAATGTTTGAT
GGAATGGATGAAGAGGAAGCTCCAAAGAATAAAAAACCAGAACCAGTTGATGGTCCTTTG
CTCACAGAACGTGACAAGATTAAGATTGAAAGAAGGAAGAGGAAAGACGAACGCCTGAGA
GAGGCAGAATACCAAGAACACTTGAAAGAAGTGGAGGAAGTGAAAGCTGGTATGCCTTTA
GTGTGTGTGAATCATGATGGTCAGGGTGATGGACCAAATGTTAAGGATATCCGTATGGAA
AACTTCAATATATCTGTCGGTGGTCGTGAACTTATTGTCGATGGTTCTGTCACACTTTCT
TTTGGAAGACACTACGGTCTTATTGGAAGAAACGGTACGGGGAAAACAACTCTCCTAAGG
CATATGGCTATGCACGCTATCGATGGTATTCCCAGGAACTGCCAGATATTGCATGTTGAG
CAAGAAGTGGTTGGTGATAATACCTCAGTTTTGCAATGTATTCTTAACACTGATATGGAG
AGAACCCAACTTCTGGAAGAAGAGGCTCGTCTGCTTGAATTACAGAGAGTGACTGACTTA
GAAGGCGAAGCTGCAAAGAGTGATAAGTTGAATGGGGGGATCGACAAAAATTCCCAAGCA
AAAAGGCTTGAAGAGATATACAAAAGACTTGATTTCATTGATGCTTACACGGCTGAGTCA
CGTGCAGCAACTATACTATCGGGTTTGAGTTTCTCTCCAGAAATGCAAAAGAGAGCGACT
AAAACATTTTCTGGAGGATGGAGAATGAGAATAGCTCTTGCTCGGGCATTGTTCATTGAA
CCTGATCTATTGTTGCTTGATGAACCCACGAATCATCTTGATCTGCATGCTGTCTTATGG
CTGGAAACTTACCTGGTGAAGTGGCCGAAGACATTTATAGTTGTCTCTCATGCTAGAGAG
TTCTTGAATTCTGTAGTCACAGATATCATCCATCTACAAAATCAGAAATTGAGCACCTTT
AAAGGAGACTATGATACATTTGAAAGGACACGAGAAGAACAAGTTAAGAATCAACAGAAG
GCATTCGAGGCAAATGAACGTACAAGGGCCCACATGCAGACCTTTATTGATAAGTTCAGG
TATAATGCAAAGCGTGCATCTCTTGTTCAATCTAGAATTAAGGCACTGGAACGTATTGGT
CGCGTGGATGAAGTCATCAATGATCCTGACTACAAGTTTGAGTTCCCTTCTCCTGATGAT
AGACCTGGCGCTCCTATTATAAGCTTCAGTGACGCATCCTTTGGATATCCTGGGGGACCA
ATATTGTTCAAAAATTTGAATTTTGGAATAGATTTGGATAGCAGAGTAGCAATGGTTGGT
CCTAATGGTATTGGAAAGTCAACAATACTTAAGCTTATTTCTGGGGATCTTCAACCAACC
TCAGGGACTGTTTTTCGCTCTGCTAAGGTCCGCATTGCTGTATTTAGTCAGCATCATGTT
GATGGGCTGGATCTGTCCTCAAATCCCCTCTTATATATGATGCGTTGCTTTCCAGGAGTG
CCTGAACAAAAATTACGTGGTCATCTAGGTTCATTTGGTATCACTGGAAATCTTGCTCTT
CAGCCCATGTACACTTTGTCTGGTGGCCAAAAAAGCAGAGTTGCATTTGCAAAGATAACT
TTCAAGAAACCTCACATATTGCTTCTTGATGAGCCATCAAATCACTTGGATCTTGACGCT
GTGGAGGCCTTGATACAAGGTCTTGTCTTGTTCCAAGGAGGCGTCCTGATGGTCAGTCAC
GATGAACATTTAACATCTGGTAGTGTTGATCAACTCTGGGCTGTCTCTGAGGGCAGGGTG
ATGCCTTTCGACGGGACATTCCAAGATTACAAGAAAATACTGCAATCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400021683
PEP Infomation

pacid=37470813 transcript=PGSC0003DMT400031936 locus=PGSC0003DMG400012253 ID=PGSC0003DMT400031936.v4.03 annot-version=v4.03
Sequence

MTEVASNVVHEILGRRAQDVDQPIIDYIINVVADEDFDFGHDGEGAFEALGELLVDSGCV
TDFSECRAVCSKLSEKLEKQELAKPQPTVRSLKMPLRMFDGMDEEEAPKNKKPEPVDGPL
LTERDKIKIERRKRKDERLREAEYQEHLKEVEEVKAGMPLVCVNHDGQGDGPNVKDIRME
NFNISVGGRELIVDGSVTLSFGRHYGLIGRNGTGKTTLLRHMAMHAIDGIPRNCQILHVE
QEVVGDNTSVLQCILNTDMERTQLLEEEARLLELQRVTDLEGEAAKSDKLNGGIDKNSQA
KRLEEIYKRLDFIDAYTAESRAATILSGLSFSPEMQKRATKTFSGGWRMRIALARALFIE
PDLLLLDEPTNHLDLHAVLWLETYLVKWPKTFIVVSHAREFLNSVVTDIIHLQNQKLSTF
KGDYDTFERTREEQVKNQQKAFEANERTRAHMQTFIDKFRYNAKRASLVQSRIKALERIG
RVDEVINDPDYKFEFPSPDDRPGAPIISFSDASFGYPGGPILFKNLNFGIDLDSRVAMVG
PNGIGKSTILKLISGDLQPTSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGV
PEQKLRGHLGSFGITGNLALQPMYTLSGGQKSRVAFAKITFKKPHILLLDEPSNHLDLDA
VEALIQGLVLFQGGVLMVSHDEHLTSGSVDQLWAVSEGRVMPFDGTFQDYKKILQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400031936
Transcript Infomation

pacid=37470813 locus=PGSC0003DMG400012253 ID=PGSC0003DMT400031936.v4.03 annot-version=v4.03
Sequence

ATGACGGAAGTCGCGAGCAACGTTGTACACGAAATCCTAGGCAGACGAGCTCAAGATGTA
GATCAGCCTATTATCGACTATATTATCAATGTCGTCGCCGATGAAGATTTCGATTTTGGG
CACGACGGTGAAGGTGCTTTTGAAGCCCTTGGAGAGCTACTCGTCGATTCTGGTTGTGTT
ACTGACTTCTCCGAATGTCGTGCGGTTTGTAGCAAGTTGTCTGAGAAGTTAGAGAAGCAA
GAATTGGCTAAACCCCAACCGACGGTGAGAAGCTTAAAAATGCCGCTGAGAATGTTTGAT
GGAATGGATGAAGAGGAAGCTCCAAAGAATAAAAAACCAGAACCAGTTGATGGTCCTTTG
CTCACAGAACGTGACAAGATTAAGATTGAAAGAAGGAAGAGGAAAGACGAACGCCTGAGA
GAGGCAGAATACCAAGAACACTTGAAAGAAGTGGAGGAAGTGAAAGCTGGTATGCCTTTA
GTGTGTGTGAATCATGATGGTCAGGGTGATGGACCAAATGTTAAGGATATCCGTATGGAA
AACTTCAATATATCTGTCGGTGGTCGTGAACTTATTGTCGATGGTTCTGTCACACTTTCT
TTTGGAAGACACTACGGTCTTATTGGAAGAAACGGTACGGGGAAAACAACTCTCCTAAGG
CATATGGCTATGCACGCTATCGATGGTATTCCCAGGAACTGCCAGATATTGCATGTTGAG
CAAGAAGTGGTTGGTGATAATACCTCAGTTTTGCAATGTATTCTTAACACTGATATGGAG
AGAACCCAACTTCTGGAAGAAGAGGCTCGTCTGCTTGAATTACAGAGAGTGACTGACTTA
GAAGGCGAAGCTGCAAAGAGTGATAAGTTGAATGGGGGGATCGACAAAAATTCCCAAGCA
AAAAGGCTTGAAGAGATATACAAAAGACTTGATTTCATTGATGCTTACACGGCTGAGTCA
CGTGCAGCAACTATACTATCGGGTTTGAGTTTCTCTCCAGAAATGCAAAAGAGAGCGACT
AAAACATTTTCTGGAGGATGGAGAATGAGAATAGCTCTTGCTCGGGCATTGTTCATTGAA
CCTGATCTATTGTTGCTTGATGAACCCACGAATCATCTTGATCTGCATGCTGTCTTATGG
CTGGAAACTTACCTGGTGAAGTGGCCGAAGACATTTATAGTTGTCTCTCATGCTAGAGAG
TTCTTGAATTCTGTAGTCACAGATATCATCCATCTACAAAATCAGAAATTGAGCACCTTT
AAAGGAGACTATGATACATTTGAAAGGACACGAGAAGAACAAGTTAAGAATCAACAGAAG
GCATTCGAGGCAAATGAACGTACAAGGGCCCACATGCAGACCTTTATTGATAAGTTCAGG
TATAATGCAAAGCGTGCATCTCTTGTTCAATCTAGAATTAAGGCACTGGAACGTATTGGT
CGCGTGGATGAAGTCATCAATGATCCTGACTACAAGTTTGAGTTCCCTTCTCCTGATGAT
AGACCTGGCGCTCCTATTATAAGCTTCAGTGACGCATCCTTTGGATATCCTGGGGGACCA
ATATTGTTCAAAAATTTGAATTTTGGAATAGATTTGGATAGCAGAGTAGCAATGGTTGGT
CCTAATGGTATTGGAAAGTCAACAATACTTAAGCTTATTTCTGGGGATCTTCAACCAACC
TCAGGGACTGTTTTTCGCTCTGCTAAGGTCCGCATTGCTGTATTTAGTCAGCATCATGTT
GATGGGCTGGATCTGTCCTCAAATCCCCTCTTATATATGATGCGTTGCTTTCCAGGAGTG
CCTGAACAAAAATTACGTGGTCATCTAGGTTCATTTGGTATCACTGGAAATCTTGCTCTT
CAGCCCATGTACACTTTGTCTGGTGGCCAAAAAAGCAGAGTTGCATTTGCAAAGATAACT
TTCAAGAAACCTCACATATTGCTTCTTGATGAGCCATCAAATCACTTGGATCTTGACGCT
GTGGAGGCCTTGATACAAGGTCTTGTCTTGTTCCAAGGAGGCGTCCTGATGGTCAGTCAC
GATGAACATTTAACATCTGGTAGTGTTGATCAACTCTGGGCTGTCTCTGAGGGCAGGGTG
ATGCCTTTCGACGGGACATTCCAAGATTACAAGAAAATACTGCAATCATAA