Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031932
CDS Infomation

pacid=37469339 polypeptide=PGSC0003DMP400021679 locus=PGSC0003DMG400012250 ID=PGSC0003DMT400031932.v4.03 annot-version=v4.03
Sequence

ATGGCGTCAATAGTATCGGAAACCGTTCCGAAGTTCACAGCGGAGGCCCTCAAATCCGCA
GCTAAACAATCTGAACGTTGCCATGTTGTTCCTATCCGTCTTCGTAGAGCTATCAAAAAG
TATCTCCGAGAACAAGAGGAGCCACATATGAAGAGAAAAGTGTTGAGGTTATCAGAATCT
TTCAGCCAAATAAAGGAAGTGAATTTGATGCTTCCAACCTCCACATCCAAGGAGCTTTTT
GAAGATCCTCTCAAGTCTGTTGATTGTTCACAGCGGTGGAAAATCAAAAGTGCCTATGGT
GACATTGGCCTCAAGTATAGGGATGATGAAACACTAGCCTATGTGGCGTCCCGTATGCCT
GCTGTCTACTCTGCTCTTTATAGAGTTCTTAGTGAGGTACGCAGAAGATTGCCTGGTTTT
TCACCTGCTAAGGTGTTGGATTTTGGGGCAGGGACTGGTTCTGCATTTTGGGCAGTTAGA
GAAGTGTGGCCACGGTCATTGAGTAGAATTAATTTGGTAGAGCCATCACAGTCCATGCAG
CGGGCCGGACAGAGCCTTATAAAAGGTCTTAAAAATTTGCCACTCATTCAAAGTTATGGA
AGTATTCAAGCACTCTCTCAGGATGTCAAAAAGAGTGACAGACAACATGATCTTGTGATT
GCTTCGTATGTACTTGGAGAAATTCCATCTCTGAAGGACAGAATCACGGTTGTACGCCAG
CTTTGGGAACAGACAGGAGATGTTCTGGTCTTGGTAGAACCAGGAACACCACAAGGATCT
AATATTATATCTCAAATGCGATCTCACATTTTATGGATGGAGAAAAGGAGAAGCCGCAAA
CTAGAAGGTGTATCTGGCAAAGATTCTAAAGCATTGACGACACTAAAGAACGGGGTATAT
ATAGTTGCTCCGTGTCCACATGACGGACGTTGTCCTTTGGATAACACTGGAAAATATTGT
CATTTTGTTCAACGCTTGCAAAGGACAACATCGCAACGTGCCTACAAGAGGTCGAAAGGA
GAGCCTCTACGTGGCTTTGAAGATGAAAAGTTTTGCTTCATCGCTTTTAGACGAGGAGAA
CGGCCAAGAGAGCCTTGGCCATTGGATAGTATGAAGTTTGAGACATTGAAGGAGCAGCAT
GCCAGAAGAAATCCAGAGGATTTAGAGATTGACTATGAGGACCAATTCATCTCAGAAGAT
GAGGATATTCAGGATGAAGTAGATCATGCCACGTATGATTCCGATGCTACAGAAACAGAT
GCCGTTACTGAAAATGATGATTGGGAGGAAGAAGGTGAAGAAAAGGCCCATGCCGATCTT
GGTGGTGGTTGGGGAAGAATCATATACAGTCCTCTACGAAGGGGTAAGCGGATTGAAATG
GACGTTTGTCGATCAATGAATCAAGAAGGCAGTGAAGGGTCATTTGAACGGATTGTTATT
ACAAAGAGCAAAAACCCAACATTGCATCATCAGGCTCGAAGATCGCTTTGGGGTGACTTA
TGGCCCTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021679
PEP Infomation

pacid=37469339 transcript=PGSC0003DMT400031932 locus=PGSC0003DMG400012250 ID=PGSC0003DMT400031932.v4.03 annot-version=v4.03
Sequence

MASIVSETVPKFTAEALKSAAKQSERCHVVPIRLRRAIKKYLREQEEPHMKRKVLRLSES
FSQIKEVNLMLPTSTSKELFEDPLKSVDCSQRWKIKSAYGDIGLKYRDDETLAYVASRMP
AVYSALYRVLSEVRRRLPGFSPAKVLDFGAGTGSAFWAVREVWPRSLSRINLVEPSQSMQ
RAGQSLIKGLKNLPLIQSYGSIQALSQDVKKSDRQHDLVIASYVLGEIPSLKDRITVVRQ
LWEQTGDVLVLVEPGTPQGSNIISQMRSHILWMEKRRSRKLEGVSGKDSKALTTLKNGVY
IVAPCPHDGRCPLDNTGKYCHFVQRLQRTTSQRAYKRSKGEPLRGFEDEKFCFIAFRRGE
RPREPWPLDSMKFETLKEQHARRNPEDLEIDYEDQFISEDEDIQDEVDHATYDSDATETD
AVTENDDWEEEGEEKAHADLGGGWGRIIYSPLRRGKRIEMDVCRSMNQEGSEGSFERIVI
TKSKNPTLHHQARRSLWGDLWPF*

Transcript Sequence

Transcript ID

PGSC0003DMT400031932
Transcript Infomation

pacid=37469339 locus=PGSC0003DMG400012250 ID=PGSC0003DMT400031932.v4.03 annot-version=v4.03
Sequence

ATGGCGTCAATAGTATCGGAAACCGTTCCGAAGTTCACAGCGGAGGCCCTCAAATCCGCA
GCTAAACAATCTGAACGTTGCCATGTTGTTCCTATCCGTCTTCGTAGAGCTATCAAAAAG
TATCTCCGAGAACAAGAGGAGCCACATATGAAGAGAAAAGTGTTGAGGTTATCAGAATCT
TTCAGCCAAATAAAGGAAGTGAATTTGATGCTTCCAACCTCCACATCCAAGGAGCTTTTT
GAAGATCCTCTCAAGTCTGTTGATTGTTCACAGCGGTGGAAAATCAAAAGTGCCTATGGT
GACATTGGCCTCAAGTATAGGGATGATGAAACACTAGCCTATGTGGCGTCCCGTATGCCT
GCTGTCTACTCTGCTCTTTATAGAGTTCTTAGTGAGGTACGCAGAAGATTGCCTGGTTTT
TCACCTGCTAAGGTGTTGGATTTTGGGGCAGGGACTGGTTCTGCATTTTGGGCAGTTAGA
GAAGTGTGGCCACGGTCATTGAGTAGAATTAATTTGGTAGAGCCATCACAGTCCATGCAG
CGGGCCGGACAGAGCCTTATAAAAGGTCTTAAAAATTTGCCACTCATTCAAAGTTATGGA
AGTATTCAAGCACTCTCTCAGGATGTCAAAAAGAGTGACAGACAACATGATCTTGTGATT
GCTTCGTATGTACTTGGAGAAATTCCATCTCTGAAGGACAGAATCACGGTTGTACGCCAG
CTTTGGGAACAGACAGGAGATGTTCTGGTCTTGGTAGAACCAGGAACACCACAAGGATCT
AATATTATATCTCAAATGCGATCTCACATTTTATGGATGGAGAAAAGGAGAAGCCGCAAA
CTAGAAGGTGTATCTGGCAAAGATTCTAAAGCATTGACGACACTAAAGAACGGGGTATAT
ATAGTTGCTCCGTGTCCACATGACGGACGTTGTCCTTTGGATAACACTGGAAAATATTGT
CATTTTGTTCAACGCTTGCAAAGGACAACATCGCAACGTGCCTACAAGAGGTCGAAAGGA
GAGCCTCTACGTGGCTTTGAAGATGAAAAGTTTTGCTTCATCGCTTTTAGACGAGGAGAA
CGGCCAAGAGAGCCTTGGCCATTGGATAGTATGAAGTTTGAGACATTGAAGGAGCAGCAT
GCCAGAAGAAATCCAGAGGATTTAGAGATTGACTATGAGGACCAATTCATCTCAGAAGAT
GAGGATATTCAGGATGAAGTAGATCATGCCACGTATGATTCCGATGCTACAGAAACAGAT
GCCGTTACTGAAAATGATGATTGGGAGGAAGAAGGTGAAGAAAAGGCCCATGCCGATCTT
GGTGGTGGTTGGGGAAGAATCATATACAGTCCTCTACGAAGGGGTAAGCGGATTGAAATG
GACGTTTGTCGATCAATGAATCAAGAAGGCAGTGAAGGGTCATTTGAACGGATTGTTATT
ACAAAGAGCAAAAACCCAACATTGCATCATCAGGCTCGAAGATCGCTTTGGGGTGACTTA
TGGCCCTTCTAA