Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031918
CDS Infomation

pacid=37470988 polypeptide=PGSC0003DMP400021668 locus=PGSC0003DMG402012244 ID=PGSC0003DMT400031918.v4.03 annot-version=v4.03
Sequence

ATGAATTCTGCGAGTTCTTGGTTTGAAAAAGTGAAATTGGATGAACCTGAAATTGTTGAA
GTATCACCAGACGAGAGATACATTCGGTATAGTGAAATCTTGGGAAGTGGAGCATTTAAG
ACTGTCTATAAGGCGTTTGACAATATTGATGGAATAGAAGTTGCCTGGAATCAAATTTGC
ATAGATGATGCTTTGCAGTCGCCTGAACATTTGGAGAGAACATATTCTGAGGTTCACTTG
TTGAAAATGTTGAAGAATGAGAACATTATAAAATTATATACTTCATGGGTGGACGATGTG
AACAAAAGTATTAATATGATCACCGAATTATTTAGTTCAGGGAGCTTAAGGCACTATCGG
AAAAGGCATAAGACAGTTGACACAAAAGCCATTAAACATTGGGCTAGACAAATTCTCCAA
GGTTTACATTATCTCCATAGTCACAATCCACCGGTTATACATAGAGACTTGAAATGTGAC
AATATATTCATCAATGGAAACCATGGAGAAGTTAAACTTGGAGATCTTGGATTGGCGACA
ATTATGGAGCAACCTACTGTTCGAAGTGTTATTGGTACCCCTGAATTTATGGCCCCTGAG
CTATATGATGAAGAATATAATGAACTTGTTGACATTTATTCTTTTGGCATGTGCATCTTG
GAGCTAATAACATGTGAATATCCATATAATGAGTGTAGAAATCAAGCACAAATTTATAAG
AAAGTCACGTCTGGAATAAAGCCAGCGTCTTTAGCAAAAATAGCAGATCCTCATGTAAAA
CAATTTGTCGAGAAATGTTTGGCCCCAGTATCAGTAAGATTAAGTGCAGCTGAACTTTTG
GAAGACCCATTTCTTTCATCTGAGAGCTTGAAAAACCCTGTATGTGATCATTTGCAGCCC
ACAAATTTTGTGCCTGGAGCACAAAGCTTGCCAAAGTCAATTTTCATGGATGTAGACCTT
GCACAAAATTTACACAGTGACATGTCCATAGAAAACAAGACTGCATCTCCTCATTTTTCT
AATCTAGATATCGTGAGACGAAATGGGAGAAACGAATTTAGGTTACAAGGTGACAAGCAT
GATGATCGTTCAATTGTGTTTTCACTGCGAATAGCTGAATTGACTGGTCGGATCAGGCAT
GTGCACTTTGTATTTTGTATTGATGCTGACACTGTGATGTCAATAGCTAGTGAGATGGCA
GAGGAGCTTGAGTTGCCAAATGACGATGTGGCAACAATAGCTGAATTAATTACCGACGTC
ATTTTCAAACTCTCAACAAGCCAGAAATATTCTTTTGGGAGTTCGTCTGCAGTGAATAAC
TCATCCGATGATTCAACTTTGATAATAGAAGATCATATTATCGGTGAAGGCATTACATCT
TTGAATCAAGGGATAGCATCAACCTCAGATGTGGAGTATAACAACGTTTTAAGGTCTCTT
GGCAATGAGTCAGATAACATCAATGTCCCCAAAATCCATACTCTAAGCAACAGTAAGGGG
AGTCTAGGTGATGCTGTAATGAGTGATTGTACCACCAAAACTTCAGGGATCTCCTTTGAT
AGCTTGCTGAATGTCATATCTAATGATTTCAGTTCTAACTCTCTTATCAACGGGGCAAAT
GACAAAAATCAACTGCAGGATCTCAAGTCGGAACTTGATGCCATCGATATGCAGTATCAA
CAATCTTGTCACGAACTCTCGAGAATGAGAGAGGAGGCAATTGAAAATGCTAGAAAGAAG
TGGACTGGTAAAAAGAAAATATGTACTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021668
PEP Infomation

pacid=37470988 transcript=PGSC0003DMT400031918 locus=PGSC0003DMG402012244 ID=PGSC0003DMT400031918.v4.03 annot-version=v4.03
Sequence

MNSASSWFEKVKLDEPEIVEVSPDERYIRYSEILGSGAFKTVYKAFDNIDGIEVAWNQIC
IDDALQSPEHLERTYSEVHLLKMLKNENIIKLYTSWVDDVNKSINMITELFSSGSLRHYR
KRHKTVDTKAIKHWARQILQGLHYLHSHNPPVIHRDLKCDNIFINGNHGEVKLGDLGLAT
IMEQPTVRSVIGTPEFMAPELYDEEYNELVDIYSFGMCILELITCEYPYNECRNQAQIYK
KVTSGIKPASLAKIADPHVKQFVEKCLAPVSVRLSAAELLEDPFLSSESLKNPVCDHLQP
TNFVPGAQSLPKSIFMDVDLAQNLHSDMSIENKTASPHFSNLDIVRRNGRNEFRLQGDKH
DDRSIVFSLRIAELTGRIRHVHFVFCIDADTVMSIASEMAEELELPNDDVATIAELITDV
IFKLSTSQKYSFGSSSAVNNSSDDSTLIIEDHIIGEGITSLNQGIASTSDVEYNNVLRSL
GNESDNINVPKIHTLSNSKGSLGDAVMSDCTTKTSGISFDSLLNVISNDFSSNSLINGAN
DKNQLQDLKSELDAIDMQYQQSCHELSRMREEAIENARKKWTGKKKICT*

Transcript Sequence

Transcript ID

PGSC0003DMT400031918
Transcript Infomation

pacid=37470988 locus=PGSC0003DMG402012244 ID=PGSC0003DMT400031918.v4.03 annot-version=v4.03
Sequence

ATGAATTCTGCGAGTTCTTGGTTTGAAAAAGTGAAATTGGATGAACCTGAAATTGTTGAA
GTATCACCAGACGAGAGATACATTCGGTATAGTGAAATCTTGGGAAGTGGAGCATTTAAG
ACTGTCTATAAGGCGTTTGACAATATTGATGGAATAGAAGTTGCCTGGAATCAAATTTGC
ATAGATGATGCTTTGCAGTCGCCTGAACATTTGGAGAGAACATATTCTGAGGTTCACTTG
TTGAAAATGTTGAAGAATGAGAACATTATAAAATTATATACTTCATGGGTGGACGATGTG
AACAAAAGTATTAATATGATCACCGAATTATTTAGTTCAGGGAGCTTAAGGCACTATCGG
AAAAGGCATAAGACAGTTGACACAAAAGCCATTAAACATTGGGCTAGACAAATTCTCCAA
GGTTTACATTATCTCCATAGTCACAATCCACCGGTTATACATAGAGACTTGAAATGTGAC
AATATATTCATCAATGGAAACCATGGAGAAGTTAAACTTGGAGATCTTGGATTGGCGACA
ATTATGGAGCAACCTACTGTTCGAAGTGTTATTGGTACCCCTGAATTTATGGCCCCTGAG
CTATATGATGAAGAATATAATGAACTTGTTGACATTTATTCTTTTGGCATGTGCATCTTG
GAGCTAATAACATGTGAATATCCATATAATGAGTGTAGAAATCAAGCACAAATTTATAAG
AAAGTCACGTCTGGAATAAAGCCAGCGTCTTTAGCAAAAATAGCAGATCCTCATGTAAAA
CAATTTGTCGAGAAATGTTTGGCCCCAGTATCAGTAAGATTAAGTGCAGCTGAACTTTTG
GAAGACCCATTTCTTTCATCTGAGAGCTTGAAAAACCCTGTATGTGATCATTTGCAGCCC
ACAAATTTTGTGCCTGGAGCACAAAGCTTGCCAAAGTCAATTTTCATGGATGTAGACCTT
GCACAAAATTTACACAGTGACATGTCCATAGAAAACAAGACTGCATCTCCTCATTTTTCT
AATCTAGATATCGTGAGACGAAATGGGAGAAACGAATTTAGGTTACAAGGTGACAAGCAT
GATGATCGTTCAATTGTGTTTTCACTGCGAATAGCTGAATTGACTGGTCGGATCAGGCAT
GTGCACTTTGTATTTTGTATTGATGCTGACACTGTGATGTCAATAGCTAGTGAGATGGCA
GAGGAGCTTGAGTTGCCAAATGACGATGTGGCAACAATAGCTGAATTAATTACCGACGTC
ATTTTCAAACTCTCAACAAGCCAGAAATATTCTTTTGGGAGTTCGTCTGCAGTGAATAAC
TCATCCGATGATTCAACTTTGATAATAGAAGATCATATTATCGGTGAAGGCATTACATCT
TTGAATCAAGGGATAGCATCAACCTCAGATGTGGAGTATAACAACGTTTTAAGGTCTCTT
GGCAATGAGTCAGATAACATCAATGTCCCCAAAATCCATACTCTAAGCAACAGTAAGGGG
AGTCTAGGTGATGCTGTAATGAGTGATTGTACCACCAAAACTTCAGGGATCTCCTTTGAT
AGCTTGCTGAATGTCATATCTAATGATTTCAGTTCTAACTCTCTTATCAACGGGGCAAAT
GACAAAAATCAACTGCAGGATCTCAAGTCGGAACTTGATGCCATCGATATGCAGTATCAA
CAATCTTGTCACGAACTCTCGAGAATGAGAGAGGAGGCAATTGAAAATGCTAGAAAGAAG
TGGACTGGTAAAAAGAAAATATGTACTTAA