Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031901
CDS Infomation

pacid=37470611 polypeptide=PGSC0003DMP400021651 locus=PGSC0003DMG400012239 ID=PGSC0003DMT400031901.v4.03 annot-version=v4.03
Sequence

ATGGCAGATACATTGAACCAAAACACCAATATCGTTGCTTCTAACAAGAAGAGATCATCG
GGTTCCGATGAGTGCGACCATCACGACGATTCCTTTTTCGTGAGCAAAAAACAATCAAAA
TCGCTTGTATGGGAGGATCCAGCGGCGGCGTTAGCCAATGCACGCCATGAATTCGGCGAA
CACGGCGGCGTTAACATGTCCATCGAGGCCTCCGCCACCTTCACCGTCATGGAACCGGAG
ACGATGCGCCGCATGTTCGCCGGAGAACTTGGTCCTGACCGTGATTTCTTCATCTACAGC
CGTCATTTCAATCCGACGGTGCTCAATCTCGGTCGCCTCATGGCTGCGCTTGAGGGAACG
GAAGCTGCTTACTGTACGGCTTCCGGCATGTCGGCGATATCATCGGTGATGTTACAGCTC
TGCAGTTCAGGTGGACACGTGGTGGCTTCGCAGACGTTGTATGGTGGGACCCATGCGTTG
CTCACGCATTTTTTACCGAGGGCTTGTAACATAACGACGTCGTTTGTGGATGTAAGGGAT
TTGGAAATGGTTAAGGAAGCTATAGTTGAAGGGAGAACAAATGTGCTGTATTTTGAGTCA
GTGTCAAATCCGACGCTGACGGTGGCTAACATCCCGGAGTTGAGCAGGATAGCGCATGAA
AAAGGTGTGACAGTGGTGGTGGACAACACTTTTGCTCCGATGGTGCTATCGCCGGTGAAA
ATGGGGGCTGATGTTGTTGTTCATAGTATTTCCAAGTACATTAGCGGTGCAGCTGATATC
ATTGCAGGTGCTGTTTGTGGGCCAGCAAGTCTTGTGAACTCCATGATGGATCTTCATCAA
GGGTCTCTTATGCTATTGGGCCCAACTATGAACCCCAAAGTGGCCTTTGAACTTGCAGAA
AGGCTTCCTCACTTGGGCCTGAGAATGAAAGAACACTGCAAACGGGCTTTGGAATATGCT
TCTAGGATGACCAAACTTGGGCTGAAAGTGATCTATCCAGGCCTAGAAGACCATCCAGAT
CATGCACTTATCAAGTCCATGGCTAATAAAGACTATGGTTATGGGGGAATTCTTTGCGTG
GACATGGAAACTGAGGAACGTGCTAATCGTTTGATGAATGTCTTGCAAAACTTTACCCAA
TTTGGGTTCATGGCTGTGAGTTTGGGATATTACGAAACTCTCATGTCGTGCTCTGGCTCT
AGCACGAGCAGCGAGTTGAACAATGAAGAGAAGGAGTTGGCTGGGATTTCACCTGGATTG
GTGCGGATGTCAATCGGGTATAATGGATCCTTGGAGCAAAAATGGAGCCAACTTGACAAG
GCATTATCCAAAATGCAAGAGAAAATGCCCTTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400021651
PEP Infomation

pacid=37470611 transcript=PGSC0003DMT400031901 locus=PGSC0003DMG400012239 ID=PGSC0003DMT400031901.v4.03 annot-version=v4.03
Sequence

MADTLNQNTNIVASNKKRSSGSDECDHHDDSFFVSKKQSKSLVWEDPAAALANARHEFGE
HGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLGRLMAALEGT
EAAYCTASGMSAISSVMLQLCSSGGHVVASQTLYGGTHALLTHFLPRACNITTSFVDVRD
LEMVKEAIVEGRTNVLYFESVSNPTLTVANIPELSRIAHEKGVTVVVDNTFAPMVLSPVK
MGADVVVHSISKYISGAADIIAGAVCGPASLVNSMMDLHQGSLMLLGPTMNPKVAFELAE
RLPHLGLRMKEHCKRALEYASRMTKLGLKVIYPGLEDHPDHALIKSMANKDYGYGGILCV
DMETEERANRLMNVLQNFTQFGFMAVSLGYYETLMSCSGSSTSSELNNEEKELAGISPGL
VRMSIGYNGSLEQKWSQLDKALSKMQEKMPF*

Transcript Sequence

Transcript ID

PGSC0003DMT400031901
Transcript Infomation

pacid=37470611 locus=PGSC0003DMG400012239 ID=PGSC0003DMT400031901.v4.03 annot-version=v4.03
Sequence

ATGGCAGATACATTGAACCAAAACACCAATATCGTTGCTTCTAACAAGAAGAGATCATCG
GGTTCCGATGAGTGCGACCATCACGACGATTCCTTTTTCGTGAGCAAAAAACAATCAAAA
TCGCTTGTATGGGAGGATCCAGCGGCGGCGTTAGCCAATGCACGCCATGAATTCGGCGAA
CACGGCGGCGTTAACATGTCCATCGAGGCCTCCGCCACCTTCACCGTCATGGAACCGGAG
ACGATGCGCCGCATGTTCGCCGGAGAACTTGGTCCTGACCGTGATTTCTTCATCTACAGC
CGTCATTTCAATCCGACGGTGCTCAATCTCGGTCGCCTCATGGCTGCGCTTGAGGGAACG
GAAGCTGCTTACTGTACGGCTTCCGGCATGTCGGCGATATCATCGGTGATGTTACAGCTC
TGCAGTTCAGGTGGACACGTGGTGGCTTCGCAGACGTTGTATGGTGGGACCCATGCGTTG
CTCACGCATTTTTTACCGAGGGCTTGTAACATAACGACGTCGTTTGTGGATGTAAGGGAT
TTGGAAATGGTTAAGGAAGCTATAGTTGAAGGGAGAACAAATGTGCTGTATTTTGAGTCA
GTGTCAAATCCGACGCTGACGGTGGCTAACATCCCGGAGTTGAGCAGGATAGCGCATGAA
AAAGGTGTGACAGTGGTGGTGGACAACACTTTTGCTCCGATGGTGCTATCGCCGGTGAAA
ATGGGGGCTGATGTTGTTGTTCATAGTATTTCCAAGTACATTAGCGGTGCAGCTGATATC
ATTGCAGGTGCTGTTTGTGGGCCAGCAAGTCTTGTGAACTCCATGATGGATCTTCATCAA
GGGTCTCTTATGCTATTGGGCCCAACTATGAACCCCAAAGTGGCCTTTGAACTTGCAGAA
AGGCTTCCTCACTTGGGCCTGAGAATGAAAGAACACTGCAAACGGGCTTTGGAATATGCT
TCTAGGATGACCAAACTTGGGCTGAAAGTGATCTATCCAGGCCTAGAAGACCATCCAGAT
CATGCACTTATCAAGTCCATGGCTAATAAAGACTATGGTTATGGGGGAATTCTTTGCGTG
GACATGGAAACTGAGGAACGTGCTAATCGTTTGATGAATGTCTTGCAAAACTTTACCCAA
TTTGGGTTCATGGCTGTGAGTTTGGGATATTACGAAACTCTCATGTCGTGCTCTGGCTCT
AGCACGAGCAGCGAGTTGAACAATGAAGAGAAGGAGTTGGCTGGGATTTCACCTGGATTG
GTGCGGATGTCAATCGGGTATAATGGATCCTTGGAGCAAAAATGGAGCCAACTTGACAAG
GCATTATCCAAAATGCAAGAGAAAATGCCCTTTTAG