Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031890
CDS Infomation

pacid=37470332 polypeptide=PGSC0003DMP400021640 locus=PGSC0003DMG400012232 ID=PGSC0003DMT400031890.v4.03 annot-version=v4.03
Sequence

ATGAAGAGTTTTGTTGTATGGTTTTTGGTGTTAGTGGGTGTTGCTTCAGGTCATAGTGGA
GAGCAGCCTTTGTCAAATATAGCAATCCACAGAGCTACTCTCGCACTTGATGAATCACTC
ACCATTAAAGCTTATCCATTTATTCTTGCTCCCAAGGGTGGTGACACTGAATGGGTAACT
GTGGATCTTGACAACCCCAACCCATCACATGATGACTGGGTTGGAGTTTTCTCTCCAGCA
AAATTCAATGGATCCACATGTTGTTTGGAAAATGATCATAAGGAACAGCCTCCATATATT
TGTACAGCCCCAATAAAGTATAACTTTGCAAATTTCTCCAATTCGGACTACGTGAAAACG
GGAAAAACTTCTCTGAAGTTCCAGTTAATCAATCAGCGGGCAGATTTCTCCTTTGTATTA
TTCACAGGCGGGTTGTCAAATCCAAAGCTGGTAGGAGTTTCAAATTACATATCATTTACA
AATCCTAAAGCACCACTTTATCCACGGCTTGCTTTGGGGAAATTATGGAATGAAATGACA
TTGACCTGGACAAGCGGCTATAATTTACTTGAAGCTGTTCCTTTCATTGAATGGGGTCGA
AAGGGTGATCCTCAACATCGCTCACCAGCAGGAACATTGACATTTGATAGAAATACAATG
TGTGGTCCACCTGCTCGAACAGTTGGCTGGCGTGATCCAGGGTTCATACACACTAGCTTC
ATGAAGGATCTGTGGCCAAGCACCTTGTACACATACAAGATGGGTCATATGTTGTCAAAT
GGTTCCTACGTGTGGAGTAAGATGTATTCCTTTAGATCATCACCATATCCAGGACAAGAC
TCATTGCAGCGTGTCATAATTTTTGGAGACATGGGAAAGGCTGAGCGGGATGGTTCAAAT
GAGTATAGTAATTATCAGCCAGGCTCACTGAATACAACGGACCAACTCATCAATGACCTT
AAAAACATTGATATAGTTTTCCATATAGGAGATATTACCTATGCCAATGGATACATATCA
CAATGGGACCAATTTACTGCACAAGTGGAACCTATTGCATCAACCGTACCCTATATGATT
GCAAGTGGTAATCATGAGCGTGATTGGCCTGGAACTGGTTCCTTCTATGATGTTATGGAC
TCTGGTGGAGAATGTGGAGTGCTAGCTCAGACCATGTTTTATGTTCCTGCTGATAATAGA
GCTAACTTTTGGTATTCAACAAATTATGGCATGTTTCACTTTTGCATAGCAGACAGTGAG
CATGATTGGAGAGAGGGGTCTGAGCAATACAGATTTATTGAACATTGTCTTGCTTCAGTA
GACAGACAGAAGCAGCCTTGGCTGATATTTGCTGCTCATCGGGTTCTTGGTTACTCTTCA
GACAAATGGTATGGCTTGGAAGGCTCATTTGAGGAGCCAATGGGAAGGGAAAGCTTGCAG
AAGCTTTGGCAGAAGTATAAAGTGGATATTGCATTTTATGGTCATGTCCATAACTATGAA
AGAACTTGTCCCATTTATCAGAACCAATGTGTGAACTCGGAAAGATCACACTATTCTGGT
ATTGTCAATGGAACAATTCATGTTGTTGTGGGTGGCGGAGGGAGCCACTTATCAGAATTC
ACCCCAATTAATACCACTTGGAGTCTTTACAGGGATTATGATTGGGGGTTCGTCAAGCTT
ACAGCATTTAATCATTCATCACTACTTTTTGAATACAAAAAGAGTAGGGACGGGAAAGTT
TATGATTCTTTCACCATCTCAAGAGACTATAAAGACGTCTTAGCATGTGTTCACGATGGT
TGTGAGCCAACCACTTTTGCATCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400021640
PEP Infomation

pacid=37470332 transcript=PGSC0003DMT400031890 locus=PGSC0003DMG400012232 ID=PGSC0003DMT400031890.v4.03 annot-version=v4.03
Sequence

MKSFVVWFLVLVGVASGHSGEQPLSNIAIHRATLALDESLTIKAYPFILAPKGGDTEWVT
VDLDNPNPSHDDWVGVFSPAKFNGSTCCLENDHKEQPPYICTAPIKYNFANFSNSDYVKT
GKTSLKFQLINQRADFSFVLFTGGLSNPKLVGVSNYISFTNPKAPLYPRLALGKLWNEMT
LTWTSGYNLLEAVPFIEWGRKGDPQHRSPAGTLTFDRNTMCGPPARTVGWRDPGFIHTSF
MKDLWPSTLYTYKMGHMLSNGSYVWSKMYSFRSSPYPGQDSLQRVIIFGDMGKAERDGSN
EYSNYQPGSLNTTDQLINDLKNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMI
ASGNHERDWPGTGSFYDVMDSGGECGVLAQTMFYVPADNRANFWYSTNYGMFHFCIADSE
HDWREGSEQYRFIEHCLASVDRQKQPWLIFAAHRVLGYSSDKWYGLEGSFEEPMGRESLQ
KLWQKYKVDIAFYGHVHNYERTCPIYQNQCVNSERSHYSGIVNGTIHVVVGGGGSHLSEF
TPINTTWSLYRDYDWGFVKLTAFNHSSLLFEYKKSRDGKVYDSFTISRDYKDVLACVHDG
CEPTTFAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400031890
Transcript Infomation

pacid=37470332 locus=PGSC0003DMG400012232 ID=PGSC0003DMT400031890.v4.03 annot-version=v4.03
Sequence

ATGAAGAGTTTTGTTGTATGGTTTTTGGTGTTAGTGGGTGTTGCTTCAGGTCATAGTGGA
GAGCAGCCTTTGTCAAATATAGCAATCCACAGAGCTACTCTCGCACTTGATGAATCACTC
ACCATTAAAGCTTATCCATTTATTCTTGCTCCCAAGGGTGGTGACACTGAATGGGTAACT
GTGGATCTTGACAACCCCAACCCATCACATGATGACTGGGTTGGAGTTTTCTCTCCAGCA
AAATTCAATGGATCCACATGTTGTTTGGAAAATGATCATAAGGAACAGCCTCCATATATT
TGTACAGCCCCAATAAAGTATAACTTTGCAAATTTCTCCAATTCGGACTACGTGAAAACG
GGAAAAACTTCTCTGAAGTTCCAGTTAATCAATCAGCGGGCAGATTTCTCCTTTGTATTA
TTCACAGGCGGGTTGTCAAATCCAAAGCTGGTAGGAGTTTCAAATTACATATCATTTACA
AATCCTAAAGCACCACTTTATCCACGGCTTGCTTTGGGGAAATTATGGAATGAAATGACA
TTGACCTGGACAAGCGGCTATAATTTACTTGAAGCTGTTCCTTTCATTGAATGGGGTCGA
AAGGGTGATCCTCAACATCGCTCACCAGCAGGAACATTGACATTTGATAGAAATACAATG
TGTGGTCCACCTGCTCGAACAGTTGGCTGGCGTGATCCAGGGTTCATACACACTAGCTTC
ATGAAGGATCTGTGGCCAAGCACCTTGTACACATACAAGATGGGTCATATGTTGTCAAAT
GGTTCCTACGTGTGGAGTAAGATGTATTCCTTTAGATCATCACCATATCCAGGACAAGAC
TCATTGCAGCGTGTCATAATTTTTGGAGACATGGGAAAGGCTGAGCGGGATGGTTCAAAT
GAGTATAGTAATTATCAGCCAGGCTCACTGAATACAACGGACCAACTCATCAATGACCTT
AAAAACATTGATATAGTTTTCCATATAGGAGATATTACCTATGCCAATGGATACATATCA
CAATGGGACCAATTTACTGCACAAGTGGAACCTATTGCATCAACCGTACCCTATATGATT
GCAAGTGGTAATCATGAGCGTGATTGGCCTGGAACTGGTTCCTTCTATGATGTTATGGAC
TCTGGTGGAGAATGTGGAGTGCTAGCTCAGACCATGTTTTATGTTCCTGCTGATAATAGA
GCTAACTTTTGGTATTCAACAAATTATGGCATGTTTCACTTTTGCATAGCAGACAGTGAG
CATGATTGGAGAGAGGGGTCTGAGCAATACAGATTTATTGAACATTGTCTTGCTTCAGTA
GACAGACAGAAGCAGCCTTGGCTGATATTTGCTGCTCATCGGGTTCTTGGTTACTCTTCA
GACAAATGGTATGGCTTGGAAGGCTCATTTGAGGAGCCAATGGGAAGGGAAAGCTTGCAG
AAGCTTTGGCAGAAGTATAAAGTGGATATTGCATTTTATGGTCATGTCCATAACTATGAA
AGAACTTGTCCCATTTATCAGAACCAATGTGTGAACTCGGAAAGATCACACTATTCTGGT
ATTGTCAATGGAACAATTCATGTTGTTGTGGGTGGCGGAGGGAGCCACTTATCAGAATTC
ACCCCAATTAATACCACTTGGAGTCTTTACAGGGATTATGATTGGGGGTTCGTCAAGCTT
ACAGCATTTAATCATTCATCACTACTTTTTGAATACAAAAAGAGTAGGGACGGGAAAGTT
TATGATTCTTTCACCATCTCAAGAGACTATAAAGACGTCTTAGCATGTGTTCACGATGGT
TGTGAGCCAACCACTTTTGCATCTTGA