Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031856
CDS Infomation

pacid=37469639 polypeptide=PGSC0003DMP400021614 locus=PGSC0003DMG400012218 ID=PGSC0003DMT400031856.v4.03 annot-version=v4.03
Sequence

ATGAGACTTTGTGTTGTATTTCAAGTTTTAGTCACTGTTGGACTAGTTCTTGGGATCTGT
GATGCTTTTCCATCAAATGAAGTTTATGCTCTCAATACCTTCAAGGAAGCTATATATGAA
GACCCTCTTCTGGTTTTGTCAAATTGGAATGGTTTAGATTCAGATCCTTGTGGTTGGGCT
GGAGTCTTTTGTTCTATGGCTCAAGATCATGTCATAAAAATAAACATTTCTGACGCTTCG
TTGAAGGGATTTCTTTCACCCAACTTGCATTTACTCTCCTCTTTGCAAGAATTAATTTTG
CATGGAAATGTGCTGATTGGCACAATTCCTAAGGAGATTGGCCTATTGAAAAACCTGAAG
GCGTTGGATTTGGGTGCTAACCAGCTAACAGGACCAATTCCTTCCGAGCTTGGCAATTTG
ACAAACATTATGAAAATAAACCTACAATCTAATGGATTAACAGGGAAATTGCCTGCTGAG
CTTGGTAACTTGAAATACCTTGAGGAACTTCGGTTGGATAGGAATAAACTCCAAGGACTA
GTGCCTGCTAATACTGGATCAGATTTTACATCTGGTGTACGTGGAATGTATGCCTCTGGT
GCCAGCACTACTGGTTTTTGTCGCACATCCCAGCTCAAAGTGGCTGATTTCTCATTCAAC
TTTCTTATTGGAAGCATACCAAAGTGTTTGGGTTACCTTCCAAAATCTAGCTTTCAAGGA
AATTGCCTTCAGCACAAAGACCCGAAGCAACGGTCTGCTGCTTTATGTGGTAGCACTCCG
CCTCCCACTAGCCATGCATCGACACTCAGCAATAAGCACCAGCCTGTTGAAGAACCGAGA
CATCAGACTTCTTCCAAGCCCACTTGGCTTTTGGCTTTAGAAGTGGTAACAGGAGTTATG
GTGGGTTCTCTCTTCATTGTAGGTCTTGTGACTGGCCTTCAGAGGCTTAAGAACAAATCG
TCAATCATACTTTGGAAGAAATCAGGAAGTGAGAAAGATCATATGACAATTTATGTAGAT
ACTGGTATGCTGAAAGATGTTGTAATATACAGCAGACAAGAACTTGAGGTAGCTTGTGAA
GATTTCAGCAACATCATTGGATCCTCACCAGATAGCATAGTTTACAAAGGAACCATGAAA
GGTGGACCTGAAATTGCTGTAATATCCCTTTGCGTCAAAGAAGAGCACTGGACAGCCTAT
CTAGAACTTTATTTTCAGAAAGAGGTGGCAGAATTGGCCAGAATAAATCACGAGAACGCT
GGGAAACTTCTAGGCTATTGCAGAGAGAGTAGTCCCTTTACGAGGATGTTGGTGTTTGAA
TATGCATCTAATGGGACATTATATGAACACCTTCATTATGGAGAAGGATGCCAACTATCT
TGGACACGCCGGATGAAAATAGTTATTGGCATCGCTAAGGGACTGACATATTTCCATTCA
GAACTTGACCCTCCATTTACTATATCAGAACTGAATTCAAATTCTGTATATCTCACCGAA
GATTTTTCTCCCAAGCTTGTTGATTTTGAAAGCTGGAAGTCGATAATTTCCAGATCAGAA
AAGAATTCAGGTGCTATCAGTAGTGAAGGAGCAATATGTGTCCTTCCAAATACTCTCGAG
AGCCGTCATCTCGATGTCCAGGGTAACATTTATGCATTTGGAGTACTTCTACTGGAAATA
ATCAGTGGGAGACCTCCATATTGCAAAGACAAAGGGTGCTTAGTAGATTGGGCTAAGGAA
TTTCTTGAAGTGCCGGAGGTTTTATCCTACGTTGTGGATCCCGAGTTGAAACATTTCAAA
CAGGAAGACCTCAAAGTGATATGTGAGGTGATCAACCTTTGCATCCACCCGACTACGAGT
AGGAGGACATCCATGAAGGACCTGTGTGCTATTCTGGAGAGCAACATTGACACTTCCATC
ACTGCAGAGCTCAAGGCGTCTTCGTTGGCATGGGCCGAGCTTGCACTTTCATCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021614
PEP Infomation

pacid=37469639 transcript=PGSC0003DMT400031856 locus=PGSC0003DMG400012218 ID=PGSC0003DMT400031856.v4.03 annot-version=v4.03
Sequence

MRLCVVFQVLVTVGLVLGICDAFPSNEVYALNTFKEAIYEDPLLVLSNWNGLDSDPCGWA
GVFCSMAQDHVIKINISDASLKGFLSPNLHLLSSLQELILHGNVLIGTIPKEIGLLKNLK
ALDLGANQLTGPIPSELGNLTNIMKINLQSNGLTGKLPAELGNLKYLEELRLDRNKLQGL
VPANTGSDFTSGVRGMYASGASTTGFCRTSQLKVADFSFNFLIGSIPKCLGYLPKSSFQG
NCLQHKDPKQRSAALCGSTPPPTSHASTLSNKHQPVEEPRHQTSSKPTWLLALEVVTGVM
VGSLFIVGLVTGLQRLKNKSSIILWKKSGSEKDHMTIYVDTGMLKDVVIYSRQELEVACE
DFSNIIGSSPDSIVYKGTMKGGPEIAVISLCVKEEHWTAYLELYFQKEVAELARINHENA
GKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIVIGIAKGLTYFHS
ELDPPFTISELNSNSVYLTEDFSPKLVDFESWKSIISRSEKNSGAISSEGAICVLPNTLE
SRHLDVQGNIYAFGVLLLEIISGRPPYCKDKGCLVDWAKEFLEVPEVLSYVVDPELKHFK
QEDLKVICEVINLCIHPTTSRRTSMKDLCAILESNIDTSITAELKASSLAWAELALSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400031856
Transcript Infomation

pacid=37469639 locus=PGSC0003DMG400012218 ID=PGSC0003DMT400031856.v4.03 annot-version=v4.03
Sequence

ATGAGACTTTGTGTTGTATTTCAAGTTTTAGTCACTGTTGGACTAGTTCTTGGGATCTGT
GATGCTTTTCCATCAAATGAAGTTTATGCTCTCAATACCTTCAAGGAAGCTATATATGAA
GACCCTCTTCTGGTTTTGTCAAATTGGAATGGTTTAGATTCAGATCCTTGTGGTTGGGCT
GGAGTCTTTTGTTCTATGGCTCAAGATCATGTCATAAAAATAAACATTTCTGACGCTTCG
TTGAAGGGATTTCTTTCACCCAACTTGCATTTACTCTCCTCTTTGCAAGAATTAATTTTG
CATGGAAATGTGCTGATTGGCACAATTCCTAAGGAGATTGGCCTATTGAAAAACCTGAAG
GCGTTGGATTTGGGTGCTAACCAGCTAACAGGACCAATTCCTTCCGAGCTTGGCAATTTG
ACAAACATTATGAAAATAAACCTACAATCTAATGGATTAACAGGGAAATTGCCTGCTGAG
CTTGGTAACTTGAAATACCTTGAGGAACTTCGGTTGGATAGGAATAAACTCCAAGGACTA
GTGCCTGCTAATACTGGATCAGATTTTACATCTGGTGTACGTGGAATGTATGCCTCTGGT
GCCAGCACTACTGGTTTTTGTCGCACATCCCAGCTCAAAGTGGCTGATTTCTCATTCAAC
TTTCTTATTGGAAGCATACCAAAGTGTTTGGGTTACCTTCCAAAATCTAGCTTTCAAGGA
AATTGCCTTCAGCACAAAGACCCGAAGCAACGGTCTGCTGCTTTATGTGGTAGCACTCCG
CCTCCCACTAGCCATGCATCGACACTCAGCAATAAGCACCAGCCTGTTGAAGAACCGAGA
CATCAGACTTCTTCCAAGCCCACTTGGCTTTTGGCTTTAGAAGTGGTAACAGGAGTTATG
GTGGGTTCTCTCTTCATTGTAGGTCTTGTGACTGGCCTTCAGAGGCTTAAGAACAAATCG
TCAATCATACTTTGGAAGAAATCAGGAAGTGAGAAAGATCATATGACAATTTATGTAGAT
ACTGGTATGCTGAAAGATGTTGTAATATACAGCAGACAAGAACTTGAGGTAGCTTGTGAA
GATTTCAGCAACATCATTGGATCCTCACCAGATAGCATAGTTTACAAAGGAACCATGAAA
GGTGGACCTGAAATTGCTGTAATATCCCTTTGCGTCAAAGAAGAGCACTGGACAGCCTAT
CTAGAACTTTATTTTCAGAAAGAGGTGGCAGAATTGGCCAGAATAAATCACGAGAACGCT
GGGAAACTTCTAGGCTATTGCAGAGAGAGTAGTCCCTTTACGAGGATGTTGGTGTTTGAA
TATGCATCTAATGGGACATTATATGAACACCTTCATTATGGAGAAGGATGCCAACTATCT
TGGACACGCCGGATGAAAATAGTTATTGGCATCGCTAAGGGACTGACATATTTCCATTCA
GAACTTGACCCTCCATTTACTATATCAGAACTGAATTCAAATTCTGTATATCTCACCGAA
GATTTTTCTCCCAAGCTTGTTGATTTTGAAAGCTGGAAGTCGATAATTTCCAGATCAGAA
AAGAATTCAGGTGCTATCAGTAGTGAAGGAGCAATATGTGTCCTTCCAAATACTCTCGAG
AGCCGTCATCTCGATGTCCAGGGTAACATTTATGCATTTGGAGTACTTCTACTGGAAATA
ATCAGTGGGAGACCTCCATATTGCAAAGACAAAGGGTGCTTAGTAGATTGGGCTAAGGAA
TTTCTTGAAGTGCCGGAGGTTTTATCCTACGTTGTGGATCCCGAGTTGAAACATTTCAAA
CAGGAAGACCTCAAAGTGATATGTGAGGTGATCAACCTTTGCATCCACCCGACTACGAGT
AGGAGGACATCCATGAAGGACCTGTGTGCTATTCTGGAGAGCAACATTGACACTTCCATC
ACTGCAGAGCTCAAGGCGTCTTCGTTGGCATGGGCCGAGCTTGCACTTTCATCCTAA