Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031823
CDS Infomation

pacid=37470807 polypeptide=PGSC0003DMP400021584 locus=PGSC0003DMG400012208 ID=PGSC0003DMT400031823.v4.03 annot-version=v4.03
Sequence

ATGGCTGGGGGAAGTCAACCACGCCAAAGTGACAAACCTTCAATCAGATACAGGTGTAAT
CTACTTGATGGGGCACTGTTTGAAATCACTGATTTAGACCGACAGAGTAATGCCCCTATT
TCTTCTGGAAATAAGGAGAACCCTAGAAATTCTGACTCTGAATCTTCTGAGATAATGAGC
ACAAGTGAGCTCATATCAGCAGTTGGAAGTATATGGGATTCTGCAGCTCGCCCTGTTACA
CGAATCCTATCTAAAGCAAGTTCTAGATGCAATAATACCGATCACCAAGAAAACAACATA
TTTGGTTACTCCACTGCAGATAAAATTTCTGGTGTTTGTTTTTCACCTCCTGATCACTCA
ATACCTGTCAATGTGGATAGTGATACAGATTCTTCACCTCTACAGCTTGCAAATGTGGAA
CAACTAACAGCGAACCAGAAAGTCTCATTCTTTGGTCCTCTCTTAGGAAGTTCTTCTCTG
CAGAGTGTCCTCCATGACAGATCTACCATGCATCCAGAAACTCGGAAAGCAAAAGATTTC
GTCAATTATTTACAGAATGTGTATGGTTGGATGCATGAAGCATCCTTACTGAAATTTAAG
CAACAATTAAATTGTGCTAGTATTGGATGCCATGAAAACAGAAAATGTACCATAGAAGAC
ACGACAAACAGTCCTTTAAGTTGCTGCTCAGTTGTGGATACAGTAAATGCTGATTGCCGG
ACTGACAGGGAAGAGCCAGCTGGTTCATTGTTAAGTCAGATCGCAAAGCATGACGAGATC
GACAGGGTGTCAACCGGCACTTCATCTCTAAGGCACTATAATGAAGTTTTTCATGACAAA
AAGTCAAACACACTAGAGATTTCATGTTCCGAAAATAAGTCAGTCTTCCATGAGTACTCT
GTCACTCCAACTTGTTCTGCTAGTGTAGATGACAAAGTTAATGCTAAGGATCACATATAT
GATTCTGCCATTAATGAAAAAGTAGAACTGGAGGAAGAGCTCAGTTCTGAAGTACAGATC
TCTGTGGCAAAGGAAAAGCCTCGGTATGCACTTGCAAAACAAGAGCATGCTTTTGCAGGA
GCAATGGCTGGAATTTTTGTCAGCCTTTGTCTTCATCCAGTTGACACAATTAAAACTGTT
ATTCAGTCATGCCCCAATGATCAGAAGCCACTTTATTATATAGGCAGATCATTTATTTCT
GAAAGAGGAGTAACAGCACTTTATCGGGGAATTTCGACCAATCTTGCTTCGTCTGCACCA
ATATCTGCACTTTACACCTTTACATACGAATCAGTGAAAGGGACCTTACTTCCTCTTTTT
CCTAAGGAATGCCACTCTTTTGCACACTGCTTGGCTGGGGGTTGTGCAAGCATTGCCACT
TCATTCATTTTCACTCCGAGTGAGCGCATAAAACAACAGATGCAAGTGGGCTCCCACTAT
AAAAACTGCTGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021584
PEP Infomation

pacid=37470807 transcript=PGSC0003DMT400031823 locus=PGSC0003DMG400012208 ID=PGSC0003DMT400031823.v4.03 annot-version=v4.03
Sequence

MAGGSQPRQSDKPSIRYRCNLLDGALFEITDLDRQSNAPISSGNKENPRNSDSESSEIMS
TSELISAVGSIWDSAARPVTRILSKASSRCNNTDHQENNIFGYSTADKISGVCFSPPDHS
IPVNVDSDTDSSPLQLANVEQLTANQKVSFFGPLLGSSSLQSVLHDRSTMHPETRKAKDF
VNYLQNVYGWMHEASLLKFKQQLNCASIGCHENRKCTIEDTTNSPLSCCSVVDTVNADCR
TDREEPAGSLLSQIAKHDEIDRVSTGTSSLRHYNEVFHDKKSNTLEISCSENKSVFHEYS
VTPTCSASVDDKVNAKDHIYDSAINEKVELEEELSSEVQISVAKEKPRYALAKQEHAFAG
AMAGIFVSLCLHPVDTIKTVIQSCPNDQKPLYYIGRSFISERGVTALYRGISTNLASSAP
ISALYTFTYESVKGTLLPLFPKECHSFAHCLAGGCASIATSFIFTPSERIKQQMQVGSHY
KNCW*

Transcript Sequence

Transcript ID

PGSC0003DMT400031823
Transcript Infomation

pacid=37470807 locus=PGSC0003DMG400012208 ID=PGSC0003DMT400031823.v4.03 annot-version=v4.03
Sequence

ATGGCTGGGGGAAGTCAACCACGCCAAAGTGACAAACCTTCAATCAGATACAGGTGTAAT
CTACTTGATGGGGCACTGTTTGAAATCACTGATTTAGACCGACAGAGTAATGCCCCTATT
TCTTCTGGAAATAAGGAGAACCCTAGAAATTCTGACTCTGAATCTTCTGAGATAATGAGC
ACAAGTGAGCTCATATCAGCAGTTGGAAGTATATGGGATTCTGCAGCTCGCCCTGTTACA
CGAATCCTATCTAAAGCAAGTTCTAGATGCAATAATACCGATCACCAAGAAAACAACATA
TTTGGTTACTCCACTGCAGATAAAATTTCTGGTGTTTGTTTTTCACCTCCTGATCACTCA
ATACCTGTCAATGTGGATAGTGATACAGATTCTTCACCTCTACAGCTTGCAAATGTGGAA
CAACTAACAGCGAACCAGAAAGTCTCATTCTTTGGTCCTCTCTTAGGAAGTTCTTCTCTG
CAGAGTGTCCTCCATGACAGATCTACCATGCATCCAGAAACTCGGAAAGCAAAAGATTTC
GTCAATTATTTACAGAATGTGTATGGTTGGATGCATGAAGCATCCTTACTGAAATTTAAG
CAACAATTAAATTGTGCTAGTATTGGATGCCATGAAAACAGAAAATGTACCATAGAAGAC
ACGACAAACAGTCCTTTAAGTTGCTGCTCAGTTGTGGATACAGTAAATGCTGATTGCCGG
ACTGACAGGGAAGAGCCAGCTGGTTCATTGTTAAGTCAGATCGCAAAGCATGACGAGATC
GACAGGGTGTCAACCGGCACTTCATCTCTAAGGCACTATAATGAAGTTTTTCATGACAAA
AAGTCAAACACACTAGAGATTTCATGTTCCGAAAATAAGTCAGTCTTCCATGAGTACTCT
GTCACTCCAACTTGTTCTGCTAGTGTAGATGACAAAGTTAATGCTAAGGATCACATATAT
GATTCTGCCATTAATGAAAAAGTAGAACTGGAGGAAGAGCTCAGTTCTGAAGTACAGATC
TCTGTGGCAAAGGAAAAGCCTCGGTATGCACTTGCAAAACAAGAGCATGCTTTTGCAGGA
GCAATGGCTGGAATTTTTGTCAGCCTTTGTCTTCATCCAGTTGACACAATTAAAACTGTT
ATTCAGTCATGCCCCAATGATCAGAAGCCACTTTATTATATAGGCAGATCATTTATTTCT
GAAAGAGGAGTAACAGCACTTTATCGGGGAATTTCGACCAATCTTGCTTCGTCTGCACCA
ATATCTGCACTTTACACCTTTACATACGAATCAGTGAAAGGGACCTTACTTCCTCTTTTT
CCTAAGGAATGCCACTCTTTTGCACACTGCTTGGCTGGGGGTTGTGCAAGCATTGCCACT
TCATTCATTTTCACTCCGAGTGAGCGCATAAAACAACAGATGCAAGTGGGCTCCCACTAT
AAAAACTGCTGGTAA