Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031804
CDS Infomation

pacid=37469508 polypeptide=PGSC0003DMP400021569 locus=PGSC0003DMG400012202 ID=PGSC0003DMT400031804.v4.03 annot-version=v4.03
Sequence

ATGGATTTATCAACGGGTATGATGATTGTAGCAATTGTAGCGGCCTATTTACTTTGGTTC
AAGTCCATCACAAAATCCATGAAAGGGCCCAAAGGCCCAAAAATTTGGCCCATAGTTGGA
AGTTTACCCGGCCTGCTTGAAAATGGTAACCGGATGCATGAATGGATCGCCGAAAATCTT
CGGGTTTGCACCGGTACATACCAAACTTGCATATGTGCAATTCCCTTTTTAGCCCGGAAG
CAAGGTCTCGTGACGGTCACGTGCGATCCAAAAAATTTAGAACATATTTTGAAGGTTAGA
TTTGACAATTACCCCAAGGGTCCTACTTGGCAAGCTGTGTTTCATGATTTGTTAGGTGAG
GGTATCTTTAATTCAGATGGTGACACGTGGTTATTCCAGCGCAAGACTGCTGCGCTGGAA
TTCACCACGCGGACCTTGAGGCAGGCTATGGGTCGATGGGTGAACCGAGCTATTAAGAAT
CGATTTTGCCCGATTCTTGAAATGGCTCAGGTTCAGGGCAAGCCGGTTGAACTTCAGGAT
CTTCTCCTGAGGCTTACTTTTGATAACATTTGTGGTTTGACTTTTGGTAAAGATCCAGAG
ACGCTCTCTCCAGGGTTACCTGAGAATATTTTTGCCACGTCATTTGATCGAGCCACAGAA
GCCACGTTGCATCGGTTTATTATACCTGAGTTCATTTGGAAGTTGAAGAAAATGCTTGGA
CTTGGAGTGGAGGTGAGCTTGAGCCGTAGCTTGAAACAATTGGACAATTATATGACCGAT
ATCATCAATACACGTAAGCTCGAGTTGATGAATCATCAAAATGGCGGCCCCCAGCATGAC
GACTTGCTCTCTAGGTTCATGAAGAAAAAAGAATCATACTCCGACAAATTTCTCCAACAC
GTGGCACTTAATTTCATCCTAGCTGGACGTGACACATCATCTGTCGCGTTGAGCTGGTTC
TTTTGGCTTGTCAGCTTGAACCCGAGAGTGGAGGAAAAAATACTTGTCGAGCTTTGCACG
GTCCTAGTGGAGACACGTGGCAACGACACGTCAAAGTGGTTGGAAGAGCCCCTAGTGTTT
GAAGAAGTTGACCAATTGGCATACCTCAAGGCAGCATTATCTGAGACCCTAAGACTTTAC
CCATCAGTGCCAGAGGACTCGAAACATGTCATTTCTGATGACTATTTACCTGATGGCACA
TTCGTGCCATCAGGTTCAAATATCACATACTCCATATACTCAACCGGTCGAATGAAATTC
ATTTGGGGCGAAGACTGTTTAGAATTCAAGCCAGAACGTTGGATGTCAGAAGACGGTAAC
AAGTACCAAGTTCAAGATGCATTCAGATTCGTGGCGTTCAATGCTGGACCAAGAATTTGT
CTAGGCAAAGACTTGGCATATTTGCAAATGAAATCAATAGCAGCAGCAGTGTTGCTCCGC
CACCGCCTCGCGGTGGCACCGGGCCACAAGGTGGAGCAAAAAATGTCATTGACATTGTTC
ATGAAATACGGTCTAGTTATGAATGTTACCCCTAGAGACTTGACTCCAATTTTGGCCAAA
ATTGAGAAATTTTGCAAAATTGACCACTCTTGTGGTGGAGAGCATATAATCAATAATGGT
ATTCATCAAACAGGAGCCATTGCAGTAAATGGAATTGCAGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400021569
PEP Infomation

pacid=37469508 transcript=PGSC0003DMT400031804 locus=PGSC0003DMG400012202 ID=PGSC0003DMT400031804.v4.03 annot-version=v4.03
Sequence

MDLSTGMMIVAIVAAYLLWFKSITKSMKGPKGPKIWPIVGSLPGLLENGNRMHEWIAENL
RVCTGTYQTCICAIPFLARKQGLVTVTCDPKNLEHILKVRFDNYPKGPTWQAVFHDLLGE
GIFNSDGDTWLFQRKTAALEFTTRTLRQAMGRWVNRAIKNRFCPILEMAQVQGKPVELQD
LLLRLTFDNICGLTFGKDPETLSPGLPENIFATSFDRATEATLHRFIIPEFIWKLKKMLG
LGVEVSLSRSLKQLDNYMTDIINTRKLELMNHQNGGPQHDDLLSRFMKKKESYSDKFLQH
VALNFILAGRDTSSVALSWFFWLVSLNPRVEEKILVELCTVLVETRGNDTSKWLEEPLVF
EEVDQLAYLKAALSETLRLYPSVPEDSKHVISDDYLPDGTFVPSGSNITYSIYSTGRMKF
IWGEDCLEFKPERWMSEDGNKYQVQDAFRFVAFNAGPRICLGKDLAYLQMKSIAAAVLLR
HRLAVAPGHKVEQKMSLTLFMKYGLVMNVTPRDLTPILAKIEKFCKIDHSCGGEHIINNG
IHQTGAIAVNGIAA*

Transcript Sequence

Transcript ID

PGSC0003DMT400031804
Transcript Infomation

pacid=37469508 locus=PGSC0003DMG400012202 ID=PGSC0003DMT400031804.v4.03 annot-version=v4.03
Sequence

ATGGATTTATCAACGGGTATGATGATTGTAGCAATTGTAGCGGCCTATTTACTTTGGTTC
AAGTCCATCACAAAATCCATGAAAGGGCCCAAAGGCCCAAAAATTTGGCCCATAGTTGGA
AGTTTACCCGGCCTGCTTGAAAATGGTAACCGGATGCATGAATGGATCGCCGAAAATCTT
CGGGTTTGCACCGGTACATACCAAACTTGCATATGTGCAATTCCCTTTTTAGCCCGGAAG
CAAGGTCTCGTGACGGTCACGTGCGATCCAAAAAATTTAGAACATATTTTGAAGGTTAGA
TTTGACAATTACCCCAAGGGTCCTACTTGGCAAGCTGTGTTTCATGATTTGTTAGGTGAG
GGTATCTTTAATTCAGATGGTGACACGTGGTTATTCCAGCGCAAGACTGCTGCGCTGGAA
TTCACCACGCGGACCTTGAGGCAGGCTATGGGTCGATGGGTGAACCGAGCTATTAAGAAT
CGATTTTGCCCGATTCTTGAAATGGCTCAGGTTCAGGGCAAGCCGGTTGAACTTCAGGAT
CTTCTCCTGAGGCTTACTTTTGATAACATTTGTGGTTTGACTTTTGGTAAAGATCCAGAG
ACGCTCTCTCCAGGGTTACCTGAGAATATTTTTGCCACGTCATTTGATCGAGCCACAGAA
GCCACGTTGCATCGGTTTATTATACCTGAGTTCATTTGGAAGTTGAAGAAAATGCTTGGA
CTTGGAGTGGAGGTGAGCTTGAGCCGTAGCTTGAAACAATTGGACAATTATATGACCGAT
ATCATCAATACACGTAAGCTCGAGTTGATGAATCATCAAAATGGCGGCCCCCAGCATGAC
GACTTGCTCTCTAGGTTCATGAAGAAAAAAGAATCATACTCCGACAAATTTCTCCAACAC
GTGGCACTTAATTTCATCCTAGCTGGACGTGACACATCATCTGTCGCGTTGAGCTGGTTC
TTTTGGCTTGTCAGCTTGAACCCGAGAGTGGAGGAAAAAATACTTGTCGAGCTTTGCACG
GTCCTAGTGGAGACACGTGGCAACGACACGTCAAAGTGGTTGGAAGAGCCCCTAGTGTTT
GAAGAAGTTGACCAATTGGCATACCTCAAGGCAGCATTATCTGAGACCCTAAGACTTTAC
CCATCAGTGCCAGAGGACTCGAAACATGTCATTTCTGATGACTATTTACCTGATGGCACA
TTCGTGCCATCAGGTTCAAATATCACATACTCCATATACTCAACCGGTCGAATGAAATTC
ATTTGGGGCGAAGACTGTTTAGAATTCAAGCCAGAACGTTGGATGTCAGAAGACGGTAAC
AAGTACCAAGTTCAAGATGCATTCAGATTCGTGGCGTTCAATGCTGGACCAAGAATTTGT
CTAGGCAAAGACTTGGCATATTTGCAAATGAAATCAATAGCAGCAGCAGTGTTGCTCCGC
CACCGCCTCGCGGTGGCACCGGGCCACAAGGTGGAGCAAAAAATGTCATTGACATTGTTC
ATGAAATACGGTCTAGTTATGAATGTTACCCCTAGAGACTTGACTCCAATTTTGGCCAAA
ATTGAGAAATTTTGCAAAATTGACCACTCTTGTGGTGGAGAGCATATAATCAATAATGGT
ATTCATCAAACAGGAGCCATTGCAGTAAATGGAATTGCAGCTTGA