Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031793
CDS Infomation

pacid=37471265 polypeptide=PGSC0003DMP400021560 locus=PGSC0003DMG401012197 ID=PGSC0003DMT400031793.v4.03 annot-version=v4.03
Sequence

ATGGAAGAATGGTTAAGATTAGATGATGGCTCTCTGATTTTTAAAGAAAATAGGGGGAGT
GGTTCTGCTATAGATGGGGGTAAGAGTAGGTTTAGGAGGTTGTTTGATGAGGTTTTTGCG
GTTTTTCTCAGTCAGAAACCTGAGAAAAAAAGTGTATGGAGTTTTCCAGTTTTGAGTGGT
AGTGGGAAGCCTATAGATTTGTTTAAACTCTTCTGGATTGTGAGGAAACTAGGTGGTTAT
GATCTGGTTTCGTCCAAGAACTTGTGGGGTTGTGTTGCAGAGCGTTGCGGGTCGGATACT
GGGGCTGTTGCATCTGTGAAGTTGGTGTATGCCAAGTACTTGAGAGAGTTTGATCATTGG
CTAAAACCACTACTTAAAGATGGGAACTTGGTGGAAGGAGAGGGTGGTGTAATTGGGAAA
CTTGATTTGTTGTTGAAGGAGTTGGAGACAATGTTTGGTAATTTGTTTCCTTCAGAAAAT
GGTTGCAAGGAAGAGCTTATGTGTAAGGTCAATAGTCAGGTTGATTATGAAATGTTTACT
GCTGAAAGTGTTAATGACACTAATGATTGCACAGAGCACAGAAGTTGCAATGCTGAACAC
AGGAAGCATAACCTTAACAATGGTGGTGAAAAATCCTTTTCTAAGATTGCCAATGACACC
ATCTTTTTGGTATCTACCGAGGGGATTGTTGAGAAAATCCTTCATCGAGCATCTGCCAAA
TCAAATAGGCAGTATGATGATGACGAAAAATTTGCCCAGATGATTGGCATGGGAGAAAAA
GCGAACAATGGCAAAGAGAACTTTTCCGTTCTGAATGGTTCTGATACTACTGTGGTGTCG
GGAAAGAGTGTTATCGTGGACGTAACTGCTTCTCATAAGAGAAAAAGAGGATCTCCATGC
TTCTCTGAAATGTTAGATTGGCTTAAACATGCAGCAAAACATTCTAATGAAGTTCCTAAC
TCTTTGAACTGGAAAGGTCATACAGGCAAGGACTTGTGGTTCCAGGCCTTGTCGGTTAGG
GAAGCACTGCTGAAGAAAAGCCATATTGACGCAGATGCAGAGGAAGCTAACCCTCAGAAG
AAGCAGAGGATGCAGCCGTCCATGTATGAAGAAGAAAAACTTAACAATCAACCTGCAGAA
AACCTAAGATGCAGCAAAAGGATCCCTAATTTGCAAAAGCACACTCTGTGTCGAGGTTGC
AGCTTGTGTCCGACCTCTCGAAACAAAGTTGAAACTCATCAGAAGAAAGAAGATGATCTT
GCGCCAGATCTTATGAGTGTTGAGGTATCAGTAACAGAAAAACCTAAAGCTGCCTATGAA
CTCCCAAAACAAAAAGTACTTAAAGTGGATCCTGACCACCAAATTGAAGTTCCTGAATGG
ACTGGTGTGATTTTTGAGAGCGATGCCAAGTGGTTGGGCACACGAATGTGGCCTCCAGAA
GTGGAAAAAACAAACTCTTTGGTTGTGTTAGATCCTATTGGAAAGGGAAGACAAAGTTCA
TGTGGTTGTCCATTCCCGCAATCTACTGAATGCAACAGGTGCCATATTGCAGACGAGAGG
TATAAATTGTTGCGTGAGCTTGGTCCTTTGTTTTTCCGGTGGAGGTTTGACCACATGGGG
GAGGAAGTTTCGCTTTTATGGACAGATAAGGAGGAAGAAAGGTTCAAAGTTTGGGTTAGG
CCAAATGTTTCACTAAAAAACAATGTGTGGAGCAACTATAGGAAACTATTCCCATCCAAG
ACTAGGAATATGCTGGTTAGCTATTACTTCAATGTATTCCTTATCAAGCGTCGGAGCTAT
CAAAACCGGGTTACTCCAAGAGACCTCGATAGCGATGATGATGAAAAAGAGCTTGGTTGT
GTTGGCGGCAATTTTGGTGACTGTGCAGTTCGTGGACCATCCTCCAGCCGTTTACTGACA
TGCAGCCAGAATAAGGTCTGCACTGATCTTCAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400021560
PEP Infomation

pacid=37471265 transcript=PGSC0003DMT400031793 locus=PGSC0003DMG401012197 ID=PGSC0003DMT400031793.v4.03 annot-version=v4.03
Sequence

MEEWLRLDDGSLIFKENRGSGSAIDGGKSRFRRLFDEVFAVFLSQKPEKKSVWSFPVLSG
SGKPIDLFKLFWIVRKLGGYDLVSSKNLWGCVAERCGSDTGAVASVKLVYAKYLREFDHW
LKPLLKDGNLVEGEGGVIGKLDLLLKELETMFGNLFPSENGCKEELMCKVNSQVDYEMFT
AESVNDTNDCTEHRSCNAEHRKHNLNNGGEKSFSKIANDTIFLVSTEGIVEKILHRASAK
SNRQYDDDEKFAQMIGMGEKANNGKENFSVLNGSDTTVVSGKSVIVDVTASHKRKRGSPC
FSEMLDWLKHAAKHSNEVPNSLNWKGHTGKDLWFQALSVREALLKKSHIDADAEEANPQK
KQRMQPSMYEEEKLNNQPAENLRCSKRIPNLQKHTLCRGCSLCPTSRNKVETHQKKEDDL
APDLMSVEVSVTEKPKAAYELPKQKVLKVDPDHQIEVPEWTGVIFESDAKWLGTRMWPPE
VEKTNSLVVLDPIGKGRQSSCGCPFPQSTECNRCHIADERYKLLRELGPLFFRWRFDHMG
EEVSLLWTDKEEERFKVWVRPNVSLKNNVWSNYRKLFPSKTRNMLVSYYFNVFLIKRRSY
QNRVTPRDLDSDDDEKELGCVGGNFGDCAVRGPSSSRLLTCSQNKVCTDLQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400031793
Transcript Infomation

pacid=37471265 locus=PGSC0003DMG401012197 ID=PGSC0003DMT400031793.v4.03 annot-version=v4.03
Sequence

ATGGAAGAATGGTTAAGATTAGATGATGGCTCTCTGATTTTTAAAGAAAATAGGGGGAGT
GGTTCTGCTATAGATGGGGGTAAGAGTAGGTTTAGGAGGTTGTTTGATGAGGTTTTTGCG
GTTTTTCTCAGTCAGAAACCTGAGAAAAAAAGTGTATGGAGTTTTCCAGTTTTGAGTGGT
AGTGGGAAGCCTATAGATTTGTTTAAACTCTTCTGGATTGTGAGGAAACTAGGTGGTTAT
GATCTGGTTTCGTCCAAGAACTTGTGGGGTTGTGTTGCAGAGCGTTGCGGGTCGGATACT
GGGGCTGTTGCATCTGTGAAGTTGGTGTATGCCAAGTACTTGAGAGAGTTTGATCATTGG
CTAAAACCACTACTTAAAGATGGGAACTTGGTGGAAGGAGAGGGTGGTGTAATTGGGAAA
CTTGATTTGTTGTTGAAGGAGTTGGAGACAATGTTTGGTAATTTGTTTCCTTCAGAAAAT
GGTTGCAAGGAAGAGCTTATGTGTAAGGTCAATAGTCAGGTTGATTATGAAATGTTTACT
GCTGAAAGTGTTAATGACACTAATGATTGCACAGAGCACAGAAGTTGCAATGCTGAACAC
AGGAAGCATAACCTTAACAATGGTGGTGAAAAATCCTTTTCTAAGATTGCCAATGACACC
ATCTTTTTGGTATCTACCGAGGGGATTGTTGAGAAAATCCTTCATCGAGCATCTGCCAAA
TCAAATAGGCAGTATGATGATGACGAAAAATTTGCCCAGATGATTGGCATGGGAGAAAAA
GCGAACAATGGCAAAGAGAACTTTTCCGTTCTGAATGGTTCTGATACTACTGTGGTGTCG
GGAAAGAGTGTTATCGTGGACGTAACTGCTTCTCATAAGAGAAAAAGAGGATCTCCATGC
TTCTCTGAAATGTTAGATTGGCTTAAACATGCAGCAAAACATTCTAATGAAGTTCCTAAC
TCTTTGAACTGGAAAGGTCATACAGGCAAGGACTTGTGGTTCCAGGCCTTGTCGGTTAGG
GAAGCACTGCTGAAGAAAAGCCATATTGACGCAGATGCAGAGGAAGCTAACCCTCAGAAG
AAGCAGAGGATGCAGCCGTCCATGTATGAAGAAGAAAAACTTAACAATCAACCTGCAGAA
AACCTAAGATGCAGCAAAAGGATCCCTAATTTGCAAAAGCACACTCTGTGTCGAGGTTGC
AGCTTGTGTCCGACCTCTCGAAACAAAGTTGAAACTCATCAGAAGAAAGAAGATGATCTT
GCGCCAGATCTTATGAGTGTTGAGGTATCAGTAACAGAAAAACCTAAAGCTGCCTATGAA
CTCCCAAAACAAAAAGTACTTAAAGTGGATCCTGACCACCAAATTGAAGTTCCTGAATGG
ACTGGTGTGATTTTTGAGAGCGATGCCAAGTGGTTGGGCACACGAATGTGGCCTCCAGAA
GTGGAAAAAACAAACTCTTTGGTTGTGTTAGATCCTATTGGAAAGGGAAGACAAAGTTCA
TGTGGTTGTCCATTCCCGCAATCTACTGAATGCAACAGGTGCCATATTGCAGACGAGAGG
TATAAATTGTTGCGTGAGCTTGGTCCTTTGTTTTTCCGGTGGAGGTTTGACCACATGGGG
GAGGAAGTTTCGCTTTTATGGACAGATAAGGAGGAAGAAAGGTTCAAAGTTTGGGTTAGG
CCAAATGTTTCACTAAAAAACAATGTGTGGAGCAACTATAGGAAACTATTCCCATCCAAG
ACTAGGAATATGCTGGTTAGCTATTACTTCAATGTATTCCTTATCAAGCGTCGGAGCTAT
CAAAACCGGGTTACTCCAAGAGACCTCGATAGCGATGATGATGAAAAAGAGCTTGGTTGT
GTTGGCGGCAATTTTGGTGACTGTGCAGTTCGTGGACCATCCTCCAGCCGTTTACTGACA
TGCAGCCAGAATAAGGTCTGCACTGATCTTCAGTGA