Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031773
CDS Infomation

pacid=37468686 polypeptide=PGSC0003DMP400021542 locus=PGSC0003DMG400012188 ID=PGSC0003DMT400031773.v4.03 annot-version=v4.03
Sequence

ATGGCTAATCAAACCGGCGGAGCTTCAAGTACCGGCAGTCGTGATATCAGAGGAGTTCTC
ATACACGGTGGGCAGTACGTCCGTTACAATGTTTACGGCAGCTTATTTGAAGTTTCCAGC
AAATACGTTCCTCCAATTCGTCCAATCGGACGCGGCGCTTACGGCCTTGTGTGTGCTGCT
GTAAATTCTGAGACGCGTGAGGAAGTTGCGATTAAGAAAATAGGAAATGCATTTGATAAC
AGAATTGATGCGAAGAGGACATTGAGAGAAATTAAGCTACTTCGGCACTTGGACCACGAA
AACATTGTCGCAATCAAAGACCTCATAAGGCCACCAAAGAAAGAAGCTTTTAATGATGTG
TACATAGTTTCTGAATTAATGGATACAGATCTTCATCAGATTATTCGATCTGAGCAGCCT
TTGACAAATGATCACTGCCAGTACTTCATGTATCAGCTATTACGTGGACTGAAATATGTA
CACTCAGCAAATGTCTTACATCGTGATCTTAAGCCAAGCAATTTGTTCCTAAATGCAAAT
TGCGACCTCAAGATTGGAGACTTTGGGTTGGCAAGGACAACTTCTGAGACAGATTTCATG
ACTGAGTATGTTGTTACTCGCTGGTATCGAGCACCTGAATTGCTCCTTAACTGTTCAGAA
TACACTGGAGCAATTGATGTTTGGTCTGTTGGTTGTATTCTTGGTGAAATAATGACAAGA
GAACCTTTGTTTCCTGGAAAAGATTATGTGCAGCAGCTGAGACTCATTACTGAGCTACTA
GGTTCACCTGATGATGCCAGCCTTCAATTTCTGAGAAGTGATAATGCCCGAAGATATGTC
CGACAGCTTCCTCAATATCCTAAGCAACAATTTTCTGCAAGATTTCCCAGCATGTCTCCT
TTGGCTGTCGATTTGCTTGAAAAGATGCTTGTTTTTGACCCAACCCGTCGGATTACAGTT
GATGAGGCTCTTTGTCACCCATTTTTGTCATCTCTTCATGACCTCAATGATGAGCCGATT
TGCCCCAGGCCATTCAGTTTGGATTTCGACGAGCCCTCAATCACTGAAGAAAAGATCAAG
GAACTGATTTGGAGGGAGTCCGTGAAGTTTTACCCGGACTTTGTTGAACAAAATATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400021542
PEP Infomation

pacid=37468686 transcript=PGSC0003DMT400031773 locus=PGSC0003DMG400012188 ID=PGSC0003DMT400031773.v4.03 annot-version=v4.03
Sequence

MANQTGGASSTGSRDIRGVLIHGGQYVRYNVYGSLFEVSSKYVPPIRPIGRGAYGLVCAA
VNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHLDHENIVAIKDLIRPPKKEAFNDV
YIVSELMDTDLHQIIRSEQPLTNDHCQYFMYQLLRGLKYVHSANVLHRDLKPSNLFLNAN
CDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTGAIDVWSVGCILGEIMTR
EPLFPGKDYVQQLRLITELLGSPDDASLQFLRSDNARRYVRQLPQYPKQQFSARFPSMSP
LAVDLLEKMLVFDPTRRITVDEALCHPFLSSLHDLNDEPICPRPFSLDFDEPSITEEKIK
ELIWRESVKFYPDFVEQNI*

Transcript Sequence

Transcript ID

PGSC0003DMT400031773
Transcript Infomation

pacid=37468686 locus=PGSC0003DMG400012188 ID=PGSC0003DMT400031773.v4.03 annot-version=v4.03
Sequence

ATGGCTAATCAAACCGGCGGAGCTTCAAGTACCGGCAGTCGTGATATCAGAGGAGTTCTC
ATACACGGTGGGCAGTACGTCCGTTACAATGTTTACGGCAGCTTATTTGAAGTTTCCAGC
AAATACGTTCCTCCAATTCGTCCAATCGGACGCGGCGCTTACGGCCTTGTGTGTGCTGCT
GTAAATTCTGAGACGCGTGAGGAAGTTGCGATTAAGAAAATAGGAAATGCATTTGATAAC
AGAATTGATGCGAAGAGGACATTGAGAGAAATTAAGCTACTTCGGCACTTGGACCACGAA
AACATTGTCGCAATCAAAGACCTCATAAGGCCACCAAAGAAAGAAGCTTTTAATGATGTG
TACATAGTTTCTGAATTAATGGATACAGATCTTCATCAGATTATTCGATCTGAGCAGCCT
TTGACAAATGATCACTGCCAGTACTTCATGTATCAGCTATTACGTGGACTGAAATATGTA
CACTCAGCAAATGTCTTACATCGTGATCTTAAGCCAAGCAATTTGTTCCTAAATGCAAAT
TGCGACCTCAAGATTGGAGACTTTGGGTTGGCAAGGACAACTTCTGAGACAGATTTCATG
ACTGAGTATGTTGTTACTCGCTGGTATCGAGCACCTGAATTGCTCCTTAACTGTTCAGAA
TACACTGGAGCAATTGATGTTTGGTCTGTTGGTTGTATTCTTGGTGAAATAATGACAAGA
GAACCTTTGTTTCCTGGAAAAGATTATGTGCAGCAGCTGAGACTCATTACTGAGCTACTA
GGTTCACCTGATGATGCCAGCCTTCAATTTCTGAGAAGTGATAATGCCCGAAGATATGTC
CGACAGCTTCCTCAATATCCTAAGCAACAATTTTCTGCAAGATTTCCCAGCATGTCTCCT
TTGGCTGTCGATTTGCTTGAAAAGATGCTTGTTTTTGACCCAACCCGTCGGATTACAGTT
GATGAGGCTCTTTGTCACCCATTTTTGTCATCTCTTCATGACCTCAATGATGAGCCGATT
TGCCCCAGGCCATTCAGTTTGGATTTCGACGAGCCCTCAATCACTGAAGAAAAGATCAAG
GAACTGATTTGGAGGGAGTCCGTGAAGTTTTACCCGGACTTTGTTGAACAAAATATATGA