Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031739
CDS Infomation

pacid=37468192 polypeptide=PGSC0003DMP400021519 locus=PGSC0003DMG400012175 ID=PGSC0003DMT400031739.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTTTCAGTTTGCTCAAGTACTGGCGTGGTGGTGGCGCTGCCGGAGTTTTCTCT
GACGATGCCGCCGGTGCTAAAACTCGTTCAGCTGTTCTCACCGACGTTAGTGCTAACTCG
TCGGAATCTGACTCCGACGATGACGGAGACGGAGATGATGGACCGTTTTTTGACTTGGAG
TTCACTGCTCTTCCAGAAGTTGAGGAAGAAGAAGTGAAAGTTGAAGGAAATGATAGGTGT
AAAATTAGTTCAAAGAAGGAGGAGGAGACTGAGGAAGGAGATGGAAGTGAGTCGGAGAAT
GAAGGAGAGCTGAAATTCACGCTTTCCCCGTCTAGTTCGAGTGTTGATGGTACGGATCCG
AATTTATCACTTTCGCCGTCGGATGATCTTTTCTTCAAAGGAAGTTTGGTTCCAATCGAG
CCTTCATCGCTGTTGTTAACCGCCTCGGAAGCAAACTCTAAATTTTCTTCGTCATTGTTG
AAGTCTGCAACTAAGTTTAGAGTGTTAATGCTGAAGCTGAAGAAGCCAAAATCAAATGCA
GCAACAAAAACTGGAAAATTATCTGAAGGTGATGGCGATGATGGCTCTGTTTCAGCTACT
CCGAAACCACTACGGATTAAAGTATCAGAGGATGAAAAAGAGGAGCGTCAGAATCGAAGG
CAGAGCAAGTTTTTAGCAGTGAAGTTTAAGGTTGAAGAAGTTCCTATTAAGTCATTGTTT
ACTAGAGATAACAGCTCTAAAGCCAACAACAGCAGCAGCAAAATACAGAAGCGGAATCCG
GCGGAAGCATTTTCAACAAATTCAGAAAATTCTTCTTCCGATGAGAAGAAATTTTCTAAA
GAGGTGATGCAGAAATACTTGAAAAAAGTAAAACCTCTGTACATTCGCGTCTCGAAACGT
TACGGCGAGAAGCTCAGATTCTCCGGACAGTTGAGCTTAACAGGTAATGCTGCACTTAAG
CCCGGTCCTTCACCACCTCCGTCCGCAGCAGCGAAGGCAGAAGCAGCAACTGACGCTCCA
CAGACGGCAGAGAGGAACCAGAAGCAGGGGAATATCCCGTCAGGACTGCGAATAGTTCGT
AAACATTTGGGGAAAAGCAGATCAGCGTCGTCGGCGGTTGTTGCCGCGTCGCCGGTAACA
TCTAACCGTCGAGACGACTCGTTAATGCAGCAACAAGACGCAATTCAAGGCGCCATTTTA
CACTGCAAGAAGTCTTTCAATTCATCTAGAGATTCAGAGTCATCCATTTTATCACGTTCA
GCAAGCGACGCTTCACATGAAAAATCAACGCACTTAATAACAGATTCATCTGCATTAGAA
GAAGCCATAGCGGTGAGAAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400021519
PEP Infomation

pacid=37468192 transcript=PGSC0003DMT400031739 locus=PGSC0003DMG400012175 ID=PGSC0003DMT400031739.v4.03 annot-version=v4.03
Sequence

MEAFSLLKYWRGGGAAGVFSDDAAGAKTRSAVLTDVSANSSESDSDDDGDGDDGPFFDLE
FTALPEVEEEEVKVEGNDRCKISSKKEEETEEGDGSESENEGELKFTLSPSSSSVDGTDP
NLSLSPSDDLFFKGSLVPIEPSSLLLTASEANSKFSSSLLKSATKFRVLMLKLKKPKSNA
ATKTGKLSEGDGDDGSVSATPKPLRIKVSEDEKEERQNRRQSKFLAVKFKVEEVPIKSLF
TRDNSSKANNSSSKIQKRNPAEAFSTNSENSSSDEKKFSKEVMQKYLKKVKPLYIRVSKR
YGEKLRFSGQLSLTGNAALKPGPSPPPSAAAKAEAATDAPQTAERNQKQGNIPSGLRIVR
KHLGKSRSASSAVVAASPVTSNRRDDSLMQQQDAIQGAILHCKKSFNSSRDSESSILSRS
ASDASHEKSTHLITDSSALEEAIAVRN*

Transcript Sequence

Transcript ID

PGSC0003DMT400031739
Transcript Infomation

pacid=37468192 locus=PGSC0003DMG400012175 ID=PGSC0003DMT400031739.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTTTCAGTTTGCTCAAGTACTGGCGTGGTGGTGGCGCTGCCGGAGTTTTCTCT
GACGATGCCGCCGGTGCTAAAACTCGTTCAGCTGTTCTCACCGACGTTAGTGCTAACTCG
TCGGAATCTGACTCCGACGATGACGGAGACGGAGATGATGGACCGTTTTTTGACTTGGAG
TTCACTGCTCTTCCAGAAGTTGAGGAAGAAGAAGTGAAAGTTGAAGGAAATGATAGGTGT
AAAATTAGTTCAAAGAAGGAGGAGGAGACTGAGGAAGGAGATGGAAGTGAGTCGGAGAAT
GAAGGAGAGCTGAAATTCACGCTTTCCCCGTCTAGTTCGAGTGTTGATGGTACGGATCCG
AATTTATCACTTTCGCCGTCGGATGATCTTTTCTTCAAAGGAAGTTTGGTTCCAATCGAG
CCTTCATCGCTGTTGTTAACCGCCTCGGAAGCAAACTCTAAATTTTCTTCGTCATTGTTG
AAGTCTGCAACTAAGTTTAGAGTGTTAATGCTGAAGCTGAAGAAGCCAAAATCAAATGCA
GCAACAAAAACTGGAAAATTATCTGAAGGTGATGGCGATGATGGCTCTGTTTCAGCTACT
CCGAAACCACTACGGATTAAAGTATCAGAGGATGAAAAAGAGGAGCGTCAGAATCGAAGG
CAGAGCAAGTTTTTAGCAGTGAAGTTTAAGGTTGAAGAAGTTCCTATTAAGTCATTGTTT
ACTAGAGATAACAGCTCTAAAGCCAACAACAGCAGCAGCAAAATACAGAAGCGGAATCCG
GCGGAAGCATTTTCAACAAATTCAGAAAATTCTTCTTCCGATGAGAAGAAATTTTCTAAA
GAGGTGATGCAGAAATACTTGAAAAAAGTAAAACCTCTGTACATTCGCGTCTCGAAACGT
TACGGCGAGAAGCTCAGATTCTCCGGACAGTTGAGCTTAACAGGTAATGCTGCACTTAAG
CCCGGTCCTTCACCACCTCCGTCCGCAGCAGCGAAGGCAGAAGCAGCAACTGACGCTCCA
CAGACGGCAGAGAGGAACCAGAAGCAGGGGAATATCCCGTCAGGACTGCGAATAGTTCGT
AAACATTTGGGGAAAAGCAGATCAGCGTCGTCGGCGGTTGTTGCCGCGTCGCCGGTAACA
TCTAACCGTCGAGACGACTCGTTAATGCAGCAACAAGACGCAATTCAAGGCGCCATTTTA
CACTGCAAGAAGTCTTTCAATTCATCTAGAGATTCAGAGTCATCCATTTTATCACGTTCA
GCAAGCGACGCTTCACATGAAAAATCAACGCACTTAATAACAGATTCATCTGCATTAGAA
GAAGCCATAGCGGTGAGAAATTAG