Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031732
CDS Infomation

pacid=37469704 polypeptide=PGSC0003DMP400021517 locus=PGSC0003DMG400012174 ID=PGSC0003DMT400031732.v4.03 annot-version=v4.03
Sequence

ATGGAACAGAAGAATATGTTGTTGTCAGCTTTGGGTGTGGGAATAGGTGTTGGTGTTGGA
ATTGGATTGGCTTCAGGGCAGACGGTTAGTAGATGGGCTAGTGGATCCGCTGCGAATGTT
ATTACGCCGTTGATTATGGAGCAAGAGATGCTTAATCTCATAGCCAATGGCAAGGATAGT
AAAGTCACCTTTGATGAGTTTCCATACTACCTAAGCGAGCAAACAAGGGTGTTGCTGACA
AGTGCTTCTTTTGTTCATTTGACAAATGCCGACTTTGCTAAGCATACTCGCAACCTCTCC
CCTGCTAGTCGAACAATTTTGTTGTCAGGGCCTGCTGAACTTTATCAACAAATGCTCGCC
AAGGCATTGGCTCATTACTTTAATGCCAAGTTGTTGCTACTGGATGTAACTGATTTTTCA
CTGAAGATGCAAAGCAAATATGGAGGAACATGCAAAGAATATTCTTTTAAAAGATCTATA
TCGGAGACAACGGTGGGGAGAATGTCCGGAATGTTTGGATCATTTTCCATGCTTCAGTCT
AAGGAGGAAAACAAAGGATCATTGCGTAGGCAAAGCAGTGGAGTAGATATTGGATCAAAA
GATGGATCTTTTATAGCTACAAATTTGCGGAGGAACGCATCTGCCTCAGCCAATTTGAAT
GACATAAGTTCATATGGCTCATCAGGGAATCTAGCTCCACTTATGCGCAACAGTAGCTGG
GCTTTTGATGAGAGGCTTCTTATACAGACCTTGTACAAGATTATTGTCAAAGTATCAAAA
ACCAGTCCCATGGTTCTGTATCTCAGGGATGTCGAGAAGATCCTTTGTAGGTCGGAAAAG
ATATACGTGTTGTTCCAGAAAATGCTGAAGAAATTATCTGGGGCTGTTCTGATCCTGGGT
TCAAGAATTGTGGACCCTGGAAATGATTATAGGGAAATAGATGAAAGGCTTTCTTCAGTA
TTTCCCTATAACCTTGAAATCAAACCCCCAGAAGAGGAAACTCATCTTGTTAGTTGGAAG
TCTCAACTAGAAGAGGATATGAAGATGATCCAGTTTCAGGACAACAGAAATCACATAATG
GAAGTACTTTCTGCTAATGATATTGAATGTGAAGATCTAGGTTCAATTTGTATGTCGGAC
ACCATGGTCCTAAGTAACTATATAGAAGAAATTGTGGTATCCGCAATCTCGTACCATCTG
ATGAATACAAAGGACCCTGAATACAGAAATGGGAAGCTTGTTATCTCATCTTCAAGCTTG
TCCCATGGATTGGACGTATTTCAGGAAGGAAAATCTGCTCAGAAGGATACCATAAAGCTC
GAAGCACAGGCTGAAACATCGAAGGATGCTCTAGGCCGAGAAATTAGTACTACAAAACCT
GAAGCCAAAACTGAAGGTGTCCTCCCAGAAAACAAAGGTGAAGCTGAAGCTCCGGCTCCA
CCGGTGATGGATGGAAACATTACAACCCCAGCCCCCAAAACTCCTGAAGTTCCTCCTGAC
AATGAATTCGAGAAGCGTATAAGGCCTGAAGTCATACCAGCAAATGAAATTGGTGTGACA
TTTGCTGATATTGGTGCCTTGGATGAACTCAAAGAATCTCTTCAGGAGTTGGTGATGTTG
CCCCTAAGGAGACCGGACCTTTTCAAAGGTGGCCTTTTGAAGCCATGCAGAGGAATACTG
CTATTTGGGCCTCCTGGCACAGGAAAGACTATGTTGGCGAAGGCCATTGCAAGAGAAGCT
GGAGCAAGTTTCATAAATGTGTCTATGTCCACAATTACTTCAAAATGGTTTGGAGAAGAT
GAGAAAAATGTCCGTGCCTTGTTCACTCTAGCAGCTAAGGTCTCTCCCACTATTATCTTT
GTGGATGAGGTTGATAGCATGCTTGGCCAGAGATCAAGAGCCGGGGAGCATGAAGCGATG
CGGAAAATAAAGAATGAGTTCATGACTCATTGGGATGGGTTACTAACAAAAGCAGGTGAA
AAAATTCTTGTTCTTGCTGCTACCAATAGGCCATTTGACCTTGATGAAGCAATCATTAGG
CGTTTTGAGAGAAGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021517
PEP Infomation

pacid=37469704 transcript=PGSC0003DMT400031732 locus=PGSC0003DMG400012174 ID=PGSC0003DMT400031732.v4.03 annot-version=v4.03
Sequence

MEQKNMLLSALGVGIGVGVGIGLASGQTVSRWASGSAANVITPLIMEQEMLNLIANGKDS
KVTFDEFPYYLSEQTRVLLTSASFVHLTNADFAKHTRNLSPASRTILLSGPAELYQQMLA
KALAHYFNAKLLLLDVTDFSLKMQSKYGGTCKEYSFKRSISETTVGRMSGMFGSFSMLQS
KEENKGSLRRQSSGVDIGSKDGSFIATNLRRNASASANLNDISSYGSSGNLAPLMRNSSW
AFDERLLIQTLYKIIVKVSKTSPMVLYLRDVEKILCRSEKIYVLFQKMLKKLSGAVLILG
SRIVDPGNDYREIDERLSSVFPYNLEIKPPEEETHLVSWKSQLEEDMKMIQFQDNRNHIM
EVLSANDIECEDLGSICMSDTMVLSNYIEEIVVSAISYHLMNTKDPEYRNGKLVISSSSL
SHGLDVFQEGKSAQKDTIKLEAQAETSKDALGREISTTKPEAKTEGVLPENKGEAEAPAP
PVMDGNITTPAPKTPEVPPDNEFEKRIRPEVIPANEIGVTFADIGALDELKESLQELVML
PLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIAREAGASFINVSMSTITSKWFGED
EKNVRALFTLAAKVSPTIIFVDEVDSMLGQRSRAGEHEAMRKIKNEFMTHWDGLLTKAGE
KILVLAATNRPFDLDEAIIRRFERR*

Transcript Sequence

Transcript ID

PGSC0003DMT400031732
Transcript Infomation

pacid=37469704 locus=PGSC0003DMG400012174 ID=PGSC0003DMT400031732.v4.03 annot-version=v4.03
Sequence

ATGGAACAGAAGAATATGTTGTTGTCAGCTTTGGGTGTGGGAATAGGTGTTGGTGTTGGA
ATTGGATTGGCTTCAGGGCAGACGGTTAGTAGATGGGCTAGTGGATCCGCTGCGAATGTT
ATTACGCCGTTGATTATGGAGCAAGAGATGCTTAATCTCATAGCCAATGGCAAGGATAGT
AAAGTCACCTTTGATGAGTTTCCATACTACCTAAGCGAGCAAACAAGGGTGTTGCTGACA
AGTGCTTCTTTTGTTCATTTGACAAATGCCGACTTTGCTAAGCATACTCGCAACCTCTCC
CCTGCTAGTCGAACAATTTTGTTGTCAGGGCCTGCTGAACTTTATCAACAAATGCTCGCC
AAGGCATTGGCTCATTACTTTAATGCCAAGTTGTTGCTACTGGATGTAACTGATTTTTCA
CTGAAGATGCAAAGCAAATATGGAGGAACATGCAAAGAATATTCTTTTAAAAGATCTATA
TCGGAGACAACGGTGGGGAGAATGTCCGGAATGTTTGGATCATTTTCCATGCTTCAGTCT
AAGGAGGAAAACAAAGGATCATTGCGTAGGCAAAGCAGTGGAGTAGATATTGGATCAAAA
GATGGATCTTTTATAGCTACAAATTTGCGGAGGAACGCATCTGCCTCAGCCAATTTGAAT
GACATAAGTTCATATGGCTCATCAGGGAATCTAGCTCCACTTATGCGCAACAGTAGCTGG
GCTTTTGATGAGAGGCTTCTTATACAGACCTTGTACAAGATTATTGTCAAAGTATCAAAA
ACCAGTCCCATGGTTCTGTATCTCAGGGATGTCGAGAAGATCCTTTGTAGGTCGGAAAAG
ATATACGTGTTGTTCCAGAAAATGCTGAAGAAATTATCTGGGGCTGTTCTGATCCTGGGT
TCAAGAATTGTGGACCCTGGAAATGATTATAGGGAAATAGATGAAAGGCTTTCTTCAGTA
TTTCCCTATAACCTTGAAATCAAACCCCCAGAAGAGGAAACTCATCTTGTTAGTTGGAAG
TCTCAACTAGAAGAGGATATGAAGATGATCCAGTTTCAGGACAACAGAAATCACATAATG
GAAGTACTTTCTGCTAATGATATTGAATGTGAAGATCTAGGTTCAATTTGTATGTCGGAC
ACCATGGTCCTAAGTAACTATATAGAAGAAATTGTGGTATCCGCAATCTCGTACCATCTG
ATGAATACAAAGGACCCTGAATACAGAAATGGGAAGCTTGTTATCTCATCTTCAAGCTTG
TCCCATGGATTGGACGTATTTCAGGAAGGAAAATCTGCTCAGAAGGATACCATAAAGCTC
GAAGCACAGGCTGAAACATCGAAGGATGCTCTAGGCCGAGAAATTAGTACTACAAAACCT
GAAGCCAAAACTGAAGGTGTCCTCCCAGAAAACAAAGGTGAAGCTGAAGCTCCGGCTCCA
CCGGTGATGGATGGAAACATTACAACCCCAGCCCCCAAAACTCCTGAAGTTCCTCCTGAC
AATGAATTCGAGAAGCGTATAAGGCCTGAAGTCATACCAGCAAATGAAATTGGTGTGACA
TTTGCTGATATTGGTGCCTTGGATGAACTCAAAGAATCTCTTCAGGAGTTGGTGATGTTG
CCCCTAAGGAGACCGGACCTTTTCAAAGGTGGCCTTTTGAAGCCATGCAGAGGAATACTG
CTATTTGGGCCTCCTGGCACAGGAAAGACTATGTTGGCGAAGGCCATTGCAAGAGAAGCT
GGAGCAAGTTTCATAAATGTGTCTATGTCCACAATTACTTCAAAATGGTTTGGAGAAGAT
GAGAAAAATGTCCGTGCCTTGTTCACTCTAGCAGCTAAGGTCTCTCCCACTATTATCTTT
GTGGATGAGGTTGATAGCATGCTTGGCCAGAGATCAAGAGCCGGGGAGCATGAAGCGATG
CGGAAAATAAAGAATGAGTTCATGACTCATTGGGATGGGTTACTAACAAAAGCAGGTGAA
AAAATTCTTGTTCTTGCTGCTACCAATAGGCCATTTGACCTTGATGAAGCAATCATTAGG
CGTTTTGAGAGAAGGTAA