Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031718
CDS Infomation

pacid=37469669 polypeptide=PGSC0003DMP400021504 locus=PGSC0003DMG400012169 ID=PGSC0003DMT400031718.v4.03 annot-version=v4.03
Sequence

ATGGCTTCAAATGGAACTATGAAGTGTCCATCACCAATGAAAGCAACATCTAATGGAGTT
TTTCAAGGGGATAATCCATTGGATTATGCACTTCCTTTGGCTATTGTTCAAATATGTTTA
GTACTTGTGCTTACTAGACTTCTTGCTTATATTTTAAGGCCATTGAGACAACCTAGAGTC
ATTGCTGAGATTGTTGGAGGGGTTCTACTAGGCCCATCTGCTCTAGGACGCAACCAGAAG
TATCTACACGCTATATTTCCACCGAAGAGCCTTACAGTGCTAGACACCTTAGCCAATTTT
GGACTCCTCTTCTTTCTTTTCCTTGTTGGACTGGAGCTAGATCCAAAGTCCCTTCGTCGG
ACTGGAAAGAAAGCTCTAAGCATTGCTCTTGCAGGAATCAGTGTTCCTTTTGCATTAGGA
ATTGGGACATCCTTTGTTCTCCGGGAAACTGTTTCTAAAGGAGTTAACCAAGGCCCTTTT
CTCATCTTCATGGGAGTAGCCCTTTCCATCACTGCCTTCCCCGTTTTGGCTCGTATCCTG
GCTGAACTCAAGCTTTTAACAACGGACGTTGGTCAAATGGCGATGTCTGCTGCAGCTGTC
AATGATGTGGCTGCATGGATTCTACTCGCTCTAGCTATCGCCCTCTCAGGTGTTGGTCGT
TCTCCTGTTATCTCGTTATGGGTCCTTTTGTGTGGAACTGGTTTCGTGCTACTCTGCATA
TTCATTGCTCCTCGTATATTCAAATGGATGGCTAGACGTTGTTCTGAAGGTGAGCCAGTG
GACGAAAAATACGTGTGCGCTACACTTGCAGTTGTTTTGGCTGCATCATTTGTGACTGAC
ATGATTGGTATTCATGCATTGTTTGGGGCTTTTGTGCTTGGAGTTCTCGTCCCAAAGGAA
GGGCCTTTCGCGGGTGCTCTGGTGGAAAAAGTTGAGGATCTCGTGTCTGGTCTATTCCTT
CCTCTGTACTTTGTGTCTAGTGGATTGAAAACGAACGTAGCCACCATTCAAGGGGCTCAA
TCATGGGGTCTTCTTGTTCTAGTCATAGTTACAGCATGTTTTGGGAAGATTGTTGGCACT
ATCGTGGTGTCACTACTGTGCAAATTGCCCATCCAAGAGGCTGTAACCCTCGGTTTCTTG
ATGAACACTAAAGGTTTGGTGGAGCTCATTGTTCTCAACATTGGCAAAGATAGAGGAGTA
CTTAATGATCAAACATTTGCCATCATGGTGTTGATGGCTCTCTTCACGACGTTCATCACA
ACACCTATAGTGATATCAGTATATAAGCCAGCAAAACTGGCTGTGACAGCATACAAACAC
AGAACTATACAGAGGAAAAACACGAGCAAACAGCTCCGAATCTTGGCCTGCTTCCACAGC
ACAAGGAACATTCCTGCAATGCTCAATCTCATTGAGGTTTCTCGGGGTATTGAGAAGAGG
GAAGGGCTTCGTGTCTACGCAATGCACCTCATGGAGCTTTCAGAAAGATCCTCTGCAATC
CTGATGGTCCACAAGGCTAAAAAGAATGGATTGCCCTTTTGGAACACCGAACAGGTGCAA
GACTCGAATCAAATTGTTGTAGCTTTTGATACATTCTCAAATCTGAGTAAGGTATCTATT
CGACCAACTACTGCAATCTCTCCTATGAACAGCATGCACGAGGACATAGTCGCTAGTGCA
GAGAGAAAAAGGGTTGCAATGATAATCCTCCCGTTTCATAAGCACCCGAGACTCGATGGA
CATTTGGAAACAACCCGAGGCGAACTTAGGCATGTGAACAGGAGAGTTCTTCAGCATGCA
CCATGTTCAGTTGGCATATTAGTAGATCGTGGTCTCGGTGGAGCTTCTCATGTATCCTCA
AGTAACGTTGACTTCTCAGTGACTGCCTTGTTCTTCGGTGGCCATGATGATCGCGAAGCA
CTTGCTTATGGTGTACGTATAGCTGAACACCCTGGCATTAGTTTGATTGTGGTTCGGTTC
ATAGTAGACCCTGAGGTTTCCGGGACAAGTGTCAAGGTAGAAATGAATGACAAAACTAAC
CCCGAGGCTCAATCTGATGATGAAGAGTTCCTTGCTGATGTTAAACAAAAATCTTCAATA
GATGGATCGATCAAATTTGAGGAGAGGCTCGTGAAAGATGCTCGTGGGACTATAGAAGCA
ATTCGTGAGTACAATCGTTGCAATCTGTTTCTGGTTGGCAGAATGCCTGAGGGACAAGTA
GTTGTAGCATTGGACAAAAAGAGTGACTGCCCTGAGTTAGGATCCTTGGGAAACTTATTG
ACATCACCAGAATTTTCGACTACAGCATCAGTGTTGGTGGTGCAGCAGTACCGCAGCCAG
TTGCCTGAAGAATCTCTCAGTTCTTTGAAGGAAGGAGAGTCATCAGACGGCGATTGTGAT
TCAGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400021504
PEP Infomation

pacid=37469669 transcript=PGSC0003DMT400031718 locus=PGSC0003DMG400012169 ID=PGSC0003DMT400031718.v4.03 annot-version=v4.03
Sequence

MASNGTMKCPSPMKATSNGVFQGDNPLDYALPLAIVQICLVLVLTRLLAYILRPLRQPRV
IAEIVGGVLLGPSALGRNQKYLHAIFPPKSLTVLDTLANFGLLFFLFLVGLELDPKSLRR
TGKKALSIALAGISVPFALGIGTSFVLRETVSKGVNQGPFLIFMGVALSITAFPVLARIL
AELKLLTTDVGQMAMSAAAVNDVAAWILLALAIALSGVGRSPVISLWVLLCGTGFVLLCI
FIAPRIFKWMARRCSEGEPVDEKYVCATLAVVLAASFVTDMIGIHALFGAFVLGVLVPKE
GPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLVLVIVTACFGKIVGT
IVVSLLCKLPIQEAVTLGFLMNTKGLVELIVLNIGKDRGVLNDQTFAIMVLMALFTTFIT
TPIVISVYKPAKLAVTAYKHRTIQRKNTSKQLRILACFHSTRNIPAMLNLIEVSRGIEKR
EGLRVYAMHLMELSERSSAILMVHKAKKNGLPFWNTEQVQDSNQIVVAFDTFSNLSKVSI
RPTTAISPMNSMHEDIVASAERKRVAMIILPFHKHPRLDGHLETTRGELRHVNRRVLQHA
PCSVGILVDRGLGGASHVSSSNVDFSVTALFFGGHDDREALAYGVRIAEHPGISLIVVRF
IVDPEVSGTSVKVEMNDKTNPEAQSDDEEFLADVKQKSSIDGSIKFEERLVKDARGTIEA
IREYNRCNLFLVGRMPEGQVVVALDKKSDCPELGSLGNLLTSPEFSTTASVLVVQQYRSQ
LPEESLSSLKEGESSDGDCDSE*

Transcript Sequence

Transcript ID

PGSC0003DMT400031718
Transcript Infomation

pacid=37469669 locus=PGSC0003DMG400012169 ID=PGSC0003DMT400031718.v4.03 annot-version=v4.03
Sequence

ATGGCTTCAAATGGAACTATGAAGTGTCCATCACCAATGAAAGCAACATCTAATGGAGTT
TTTCAAGGGGATAATCCATTGGATTATGCACTTCCTTTGGCTATTGTTCAAATATGTTTA
GTACTTGTGCTTACTAGACTTCTTGCTTATATTTTAAGGCCATTGAGACAACCTAGAGTC
ATTGCTGAGATTGTTGGAGGGGTTCTACTAGGCCCATCTGCTCTAGGACGCAACCAGAAG
TATCTACACGCTATATTTCCACCGAAGAGCCTTACAGTGCTAGACACCTTAGCCAATTTT
GGACTCCTCTTCTTTCTTTTCCTTGTTGGACTGGAGCTAGATCCAAAGTCCCTTCGTCGG
ACTGGAAAGAAAGCTCTAAGCATTGCTCTTGCAGGAATCAGTGTTCCTTTTGCATTAGGA
ATTGGGACATCCTTTGTTCTCCGGGAAACTGTTTCTAAAGGAGTTAACCAAGGCCCTTTT
CTCATCTTCATGGGAGTAGCCCTTTCCATCACTGCCTTCCCCGTTTTGGCTCGTATCCTG
GCTGAACTCAAGCTTTTAACAACGGACGTTGGTCAAATGGCGATGTCTGCTGCAGCTGTC
AATGATGTGGCTGCATGGATTCTACTCGCTCTAGCTATCGCCCTCTCAGGTGTTGGTCGT
TCTCCTGTTATCTCGTTATGGGTCCTTTTGTGTGGAACTGGTTTCGTGCTACTCTGCATA
TTCATTGCTCCTCGTATATTCAAATGGATGGCTAGACGTTGTTCTGAAGGTGAGCCAGTG
GACGAAAAATACGTGTGCGCTACACTTGCAGTTGTTTTGGCTGCATCATTTGTGACTGAC
ATGATTGGTATTCATGCATTGTTTGGGGCTTTTGTGCTTGGAGTTCTCGTCCCAAAGGAA
GGGCCTTTCGCGGGTGCTCTGGTGGAAAAAGTTGAGGATCTCGTGTCTGGTCTATTCCTT
CCTCTGTACTTTGTGTCTAGTGGATTGAAAACGAACGTAGCCACCATTCAAGGGGCTCAA
TCATGGGGTCTTCTTGTTCTAGTCATAGTTACAGCATGTTTTGGGAAGATTGTTGGCACT
ATCGTGGTGTCACTACTGTGCAAATTGCCCATCCAAGAGGCTGTAACCCTCGGTTTCTTG
ATGAACACTAAAGGTTTGGTGGAGCTCATTGTTCTCAACATTGGCAAAGATAGAGGAGTA
CTTAATGATCAAACATTTGCCATCATGGTGTTGATGGCTCTCTTCACGACGTTCATCACA
ACACCTATAGTGATATCAGTATATAAGCCAGCAAAACTGGCTGTGACAGCATACAAACAC
AGAACTATACAGAGGAAAAACACGAGCAAACAGCTCCGAATCTTGGCCTGCTTCCACAGC
ACAAGGAACATTCCTGCAATGCTCAATCTCATTGAGGTTTCTCGGGGTATTGAGAAGAGG
GAAGGGCTTCGTGTCTACGCAATGCACCTCATGGAGCTTTCAGAAAGATCCTCTGCAATC
CTGATGGTCCACAAGGCTAAAAAGAATGGATTGCCCTTTTGGAACACCGAACAGGTGCAA
GACTCGAATCAAATTGTTGTAGCTTTTGATACATTCTCAAATCTGAGTAAGGTATCTATT
CGACCAACTACTGCAATCTCTCCTATGAACAGCATGCACGAGGACATAGTCGCTAGTGCA
GAGAGAAAAAGGGTTGCAATGATAATCCTCCCGTTTCATAAGCACCCGAGACTCGATGGA
CATTTGGAAACAACCCGAGGCGAACTTAGGCATGTGAACAGGAGAGTTCTTCAGCATGCA
CCATGTTCAGTTGGCATATTAGTAGATCGTGGTCTCGGTGGAGCTTCTCATGTATCCTCA
AGTAACGTTGACTTCTCAGTGACTGCCTTGTTCTTCGGTGGCCATGATGATCGCGAAGCA
CTTGCTTATGGTGTACGTATAGCTGAACACCCTGGCATTAGTTTGATTGTGGTTCGGTTC
ATAGTAGACCCTGAGGTTTCCGGGACAAGTGTCAAGGTAGAAATGAATGACAAAACTAAC
CCCGAGGCTCAATCTGATGATGAAGAGTTCCTTGCTGATGTTAAACAAAAATCTTCAATA
GATGGATCGATCAAATTTGAGGAGAGGCTCGTGAAAGATGCTCGTGGGACTATAGAAGCA
ATTCGTGAGTACAATCGTTGCAATCTGTTTCTGGTTGGCAGAATGCCTGAGGGACAAGTA
GTTGTAGCATTGGACAAAAAGAGTGACTGCCCTGAGTTAGGATCCTTGGGAAACTTATTG
ACATCACCAGAATTTTCGACTACAGCATCAGTGTTGGTGGTGCAGCAGTACCGCAGCCAG
TTGCCTGAAGAATCTCTCAGTTCTTTGAAGGAAGGAGAGTCATCAGACGGCGATTGTGAT
TCAGAATAA