Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031712
CDS Infomation

pacid=37470785 polypeptide=PGSC0003DMP400021499 locus=PGSC0003DMG400012166 ID=PGSC0003DMT400031712.v4.03 annot-version=v4.03
Sequence

ATGTATCATATGTTTTCCCTTTATACTGCAGGATGCTTCCTGCATGCAGCTCAATGGAAG
TCGAACTGTACCAACCTCCTAACTTACAGAACTTCGATAAGGTGTTTTCATGCCAGTCCA
GAAACACTGGCTTGGAAAAAAGAACCAGAAGCTCTGGGTTTGAAGATACAGAAGAAAGGG
AAGTTCAAGAAAAGGACAAAGGATTCCTCACCACCCGTTGAAGCTCCTTATGTCCCTCCC
AAGCTAAAAAGAGCTGCTAGCTCCTCCTTATCAGATAGAACTGTAGAGATATTCGAGGGC
ATGACAATTGTTGAGCTGGCCAAACGTTGTGGCGTGTCAATACCTGTCGTGCAGGATATT
CTTAAAAATGTGGGGGAGAAGGTTGACTCGGAATATGATCCTCTTAGCATCGACATTTCC
GAGCTTGTTGCGATGGAAATTGGAGTAAATGTTAGGAGGTTGCATTCTAACGAAGGTGCT
GAAGTCCTGCCACGTCCACCAGTGGTCACAGTGATGGGTCATGTTGACCATGGTAAAACA
TCTCTTTTAGATGCTCTACGTCTGACTTCTGTGGCTGCTAAGGAAGCTGGAGGCATAACT
CAGCATTTGGGAGCATTTGTTGTTGGAATGTCTTCTGGGGCATCAATCACGTTCCTTGAC
ACTCCTGGTCATGCGGCATTTAGCGCTATGCGACAAAGAGGTGCAGCGGTTACTGACATT
GTTGTATTGGTAGTGGCTGCTGATGACGGTGTTATGCCACAAACGCTGGAAGCAATGTCC
CATGCAAAAGCTGCTGATGTTCCAATCGTTGTCGCTGTCAATAAATGTGATAAGCCGGCA
GCAAATCCTGAAAAAGTGAAAATCCAGCTTGCAACAGAAGGGTTGGCTCTGGAGGAGATG
GGTGGAGATATTCAGGTTGTTGAAGTCTCTGCTGTAACAAAAACTGGATTGGATAAGCTG
GAGGAGGCGTTGCTTCTCCAGGCTGAGATGATGGATCTGAAGTCGCGTGTAGATGGACCA
GCCCAAGCTTATGTCGTCGAGGCAAGGGTTGATAGAGGACGGGGTCCATTGGCTACTGCA
ATAGTGAAAGCAGGAACCCTTGTCTGTGGTCAGCATGTTGTTGTAGGTGCCGAGTGGGGA
AAAATCAGGGCAATTAGGGATATGCTAGGAAAATCAACTGATAGGGCTAGGCCAGCTATG
CCTGTAGAGATCGAAGGACTCAAGGGGCTTCCAATGGCTGGTGATGACATTATTGTCGTT
CACTCTGAGGAAAGGGCAAGGATGCTTAGCGCAGGGAGGAAAAAGAAATTTGAAAAAGAT
AGACTTGGGAGGAAGATGGACGCAGAAAAATTAGGATCTCTAGTATCAGAATCTAATTTA
GAAGATGAAGAAGGTGAGGTTGAAGAGAAGCCCAAGAGGGTTGAAATGACAATAATAGTA
AAAGCAGATGTTCAAGGAACTGTCCAAGCTGTTACAGACTCATTGAAGAGTTTGGATAGT
CCTCAGGTTTTCGTGAATATTGTCCATGGAGGTGTTGGGCCTATTTCTGAGTCCGACGTG
GATTTAGCACAAGCTTGTGGTGCATTTATTGTTGGGTTCAGCATACCAACTCCACCTGGT
TCAATAAATCAAGCAGCAAATAAAGCTGGCATTAAGATAAAAATCCATCGTGTGATCTAT
CATCTTCTAGAGGATATTGGCAACTCTATTGTTGAAAAAGCCCCCGGTACATTTGAGACG
CAGGTTTCAGGCGAGGCACAGATACTGAGCATATTTGAGCTTAAAGGAAGGAGCAAAGCT
AAGGGAGATGACGTCAAGATAGCTGGTTGTCGTGTGATAGATGGCAGACTCATCAGATCA
TCAACAATGAGGCTTCTTAGAAGTGGTGAGGTTGTTTTCGAAGGATCTTGTGCATCGCTA
AAGCGTGAGAAGCAGGATGTTGAAGCAGTTGGAAAGGGGAATGAATGTGGACTTGTGATT
CAAAACTGGGATGACTTTAAGGTTGGAGATGTCATCCAATGCTTGGAGCAAGTCAACAGA
AAACCCAAATTTATTTCATCTCAAAGTGGTGCTGTCAGAATAGAATGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400021499
PEP Infomation

pacid=37470785 transcript=PGSC0003DMT400031712 locus=PGSC0003DMG400012166 ID=PGSC0003DMT400031712.v4.03 annot-version=v4.03
Sequence

MYHMFSLYTAGCFLHAAQWKSNCTNLLTYRTSIRCFHASPETLAWKKEPEALGLKIQKKG
KFKKRTKDSSPPVEAPYVPPKLKRAASSSLSDRTVEIFEGMTIVELAKRCGVSIPVVQDI
LKNVGEKVDSEYDPLSIDISELVAMEIGVNVRRLHSNEGAEVLPRPPVVTVMGHVDHGKT
SLLDALRLTSVAAKEAGGITQHLGAFVVGMSSGASITFLDTPGHAAFSAMRQRGAAVTDI
VVLVVAADDGVMPQTLEAMSHAKAADVPIVVAVNKCDKPAANPEKVKIQLATEGLALEEM
GGDIQVVEVSAVTKTGLDKLEEALLLQAEMMDLKSRVDGPAQAYVVEARVDRGRGPLATA
IVKAGTLVCGQHVVVGAEWGKIRAIRDMLGKSTDRARPAMPVEIEGLKGLPMAGDDIIVV
HSEERARMLSAGRKKKFEKDRLGRKMDAEKLGSLVSESNLEDEEGEVEEKPKRVEMTIIV
KADVQGTVQAVTDSLKSLDSPQVFVNIVHGGVGPISESDVDLAQACGAFIVGFSIPTPPG
SINQAANKAGIKIKIHRVIYHLLEDIGNSIVEKAPGTFETQVSGEAQILSIFELKGRSKA
KGDDVKIAGCRVIDGRLIRSSTMRLLRSGEVVFEGSCASLKREKQDVEAVGKGNECGLVI
QNWDDFKVGDVIQCLEQVNRKPKFISSQSGAVRIEC*

Transcript Sequence

Transcript ID

PGSC0003DMT400031712
Transcript Infomation

pacid=37470785 locus=PGSC0003DMG400012166 ID=PGSC0003DMT400031712.v4.03 annot-version=v4.03
Sequence

ATGTATCATATGTTTTCCCTTTATACTGCAGGATGCTTCCTGCATGCAGCTCAATGGAAG
TCGAACTGTACCAACCTCCTAACTTACAGAACTTCGATAAGGTGTTTTCATGCCAGTCCA
GAAACACTGGCTTGGAAAAAAGAACCAGAAGCTCTGGGTTTGAAGATACAGAAGAAAGGG
AAGTTCAAGAAAAGGACAAAGGATTCCTCACCACCCGTTGAAGCTCCTTATGTCCCTCCC
AAGCTAAAAAGAGCTGCTAGCTCCTCCTTATCAGATAGAACTGTAGAGATATTCGAGGGC
ATGACAATTGTTGAGCTGGCCAAACGTTGTGGCGTGTCAATACCTGTCGTGCAGGATATT
CTTAAAAATGTGGGGGAGAAGGTTGACTCGGAATATGATCCTCTTAGCATCGACATTTCC
GAGCTTGTTGCGATGGAAATTGGAGTAAATGTTAGGAGGTTGCATTCTAACGAAGGTGCT
GAAGTCCTGCCACGTCCACCAGTGGTCACAGTGATGGGTCATGTTGACCATGGTAAAACA
TCTCTTTTAGATGCTCTACGTCTGACTTCTGTGGCTGCTAAGGAAGCTGGAGGCATAACT
CAGCATTTGGGAGCATTTGTTGTTGGAATGTCTTCTGGGGCATCAATCACGTTCCTTGAC
ACTCCTGGTCATGCGGCATTTAGCGCTATGCGACAAAGAGGTGCAGCGGTTACTGACATT
GTTGTATTGGTAGTGGCTGCTGATGACGGTGTTATGCCACAAACGCTGGAAGCAATGTCC
CATGCAAAAGCTGCTGATGTTCCAATCGTTGTCGCTGTCAATAAATGTGATAAGCCGGCA
GCAAATCCTGAAAAAGTGAAAATCCAGCTTGCAACAGAAGGGTTGGCTCTGGAGGAGATG
GGTGGAGATATTCAGGTTGTTGAAGTCTCTGCTGTAACAAAAACTGGATTGGATAAGCTG
GAGGAGGCGTTGCTTCTCCAGGCTGAGATGATGGATCTGAAGTCGCGTGTAGATGGACCA
GCCCAAGCTTATGTCGTCGAGGCAAGGGTTGATAGAGGACGGGGTCCATTGGCTACTGCA
ATAGTGAAAGCAGGAACCCTTGTCTGTGGTCAGCATGTTGTTGTAGGTGCCGAGTGGGGA
AAAATCAGGGCAATTAGGGATATGCTAGGAAAATCAACTGATAGGGCTAGGCCAGCTATG
CCTGTAGAGATCGAAGGACTCAAGGGGCTTCCAATGGCTGGTGATGACATTATTGTCGTT
CACTCTGAGGAAAGGGCAAGGATGCTTAGCGCAGGGAGGAAAAAGAAATTTGAAAAAGAT
AGACTTGGGAGGAAGATGGACGCAGAAAAATTAGGATCTCTAGTATCAGAATCTAATTTA
GAAGATGAAGAAGGTGAGGTTGAAGAGAAGCCCAAGAGGGTTGAAATGACAATAATAGTA
AAAGCAGATGTTCAAGGAACTGTCCAAGCTGTTACAGACTCATTGAAGAGTTTGGATAGT
CCTCAGGTTTTCGTGAATATTGTCCATGGAGGTGTTGGGCCTATTTCTGAGTCCGACGTG
GATTTAGCACAAGCTTGTGGTGCATTTATTGTTGGGTTCAGCATACCAACTCCACCTGGT
TCAATAAATCAAGCAGCAAATAAAGCTGGCATTAAGATAAAAATCCATCGTGTGATCTAT
CATCTTCTAGAGGATATTGGCAACTCTATTGTTGAAAAAGCCCCCGGTACATTTGAGACG
CAGGTTTCAGGCGAGGCACAGATACTGAGCATATTTGAGCTTAAAGGAAGGAGCAAAGCT
AAGGGAGATGACGTCAAGATAGCTGGTTGTCGTGTGATAGATGGCAGACTCATCAGATCA
TCAACAATGAGGCTTCTTAGAAGTGGTGAGGTTGTTTTCGAAGGATCTTGTGCATCGCTA
AAGCGTGAGAAGCAGGATGTTGAAGCAGTTGGAAAGGGGAATGAATGTGGACTTGTGATT
CAAAACTGGGATGACTTTAAGGTTGGAGATGTCATCCAATGCTTGGAGCAAGTCAACAGA
AAACCCAAATTTATTTCATCTCAAAGTGGTGCTGTCAGAATAGAATGTTGA