Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031697
CDS Infomation

pacid=37471111 polypeptide=PGSC0003DMP400021488 locus=PGSC0003DMG400012162 ID=PGSC0003DMT400031697.v4.03 annot-version=v4.03
Sequence

ATGAGTGCTGAGACGAAACCGGTGATTAACTCGCTTACTAGAAGCACATGGAACTCAGGA
AAAGCGTACGATTTGAAACCAATGGTTTCCTCCTCTATTTCGCAAGCTTCCTCTATACCG
GAACTGATTTCGTATCTAAAATCGGCTTTTCGTGATAAGGAGTTCTCTCTGGTTGAAGGA
ATTCTAATGGACCGTGAAAAACAGCTGCGGACAGAAATTCAAAATCTTAAGAGAGATTTT
GATTCTGTAAAGACTGGGCGAGATTTAGCAGAGAAGGATCAGGCTATAGTTGACCTGGAA
AAGTTAAATATGGAGAATCGATTGAAGGATATGCAGAGGAAATATGAGGAGCTAAAAAAT
GAAAAAGCTGAAGTTGAGGCAAAACTGAAGATGTATTTGGAAAAGTTCAAAGAGTTGGAA
AGTAGAGTATCACTTCAGGAGGAAGAAGCTGCTAAAAATCGTGCTGTGGATGTCTCAGTG
ATCCAAAAAATGGTAGAAGATTTGGAAGCGGAGGATGATGATGATGCTGTAGAAGTGAAT
AGTAAAGCTTCTGGTGCTGATGGAGATCTTCAGGAAAAACAGTTGTCACCACCTAGGGCT
CCATCGGTTGATTCAACTGCAAATGGAAATGGAAATGGAAGTGGTAAATCAAGAGATGAA
GCTGCAGGCAGTGGTAACACGGACTTCATTTCAACAAAAGTGAATCTGGTTAATTGTCCT
GATGTCCAGACATTGCATCCCATGCCTTCTGCTGGTGGTTCTGCTCAAGTCAATAGCAAT
GTTTCCAACATAGAAAAGAAAAGACGTCGTTCAGAGGAAGCAGACCCTCTCCTTATCAAC
TTGGCTTGTGAGAATAGAGCACCTACTATAGATCTATCAGCATGCGAAGCAAAAGGCTGT
GTTAAGAAAAACTTGAATACAGCATCTGGCAGGGCTGGGTCTTCAACTGTTGTTCACATT
AGCGACAGCGATGATGAGAATGCAAAGGCTTGTGTTTCTAAAAGTAATGATGTAGGCAGG
AATTTAACATTTCCACACCAGATAAAAGAAGAGGATGTAAAGGAAACTTCAGTGTCCAAG
AGGAAAAGAAGCTTATGTGATAGTGACAATGGTGGTGGTTCTTCATTTAGCAAACTAAAG
ACTAGATCTATTCAAGAATTAAATCGTGATGGAAAGCTGGCCTTTTCTCATGACAATTCC
CATAAACCGGTGTTCGTAAGACGATGCGATGACAAAGATGGAGGGAAGTCTTATTCTCAA
CTATCTTCCAGAAGATCTGATTTATACAAGCTTGATGGGACTGGTGATGATAGTTCTTCA
GATTCGGAGAATGATCCCTTGAGTGACAAAAGTATGAATATGTTAATCCAAAGAATTACA
AAACGCAAAATTTTCTCGTCGGAAGATGATTTGAGGTCATCCTTTGAGAAGGACCCTGAA
CTTTGTATGAATGCGATATGTGCACTTTATAGGCACCAAATTTCTCCAAACATCTCTTCC
AAGGGCTTTTTTGCTACCACAAGACAGGGGTTGAGTCAATCTGATAAAATCAGCATAGCT
GCTTTGGGTGAATATCTGATGGATGGGGATCCAGAAAATAAACTCAGAAAAGCCGTGGAA
GAAGTACGTCCAAAGGATCATGCAGAATGTAAAAGATTAGCTACTAAATACTGCGACCAA
CTATATCAGATATACCTTAACAAGGAGGATCGTTTGTTCCTCCCAATCTCTAAGTTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400021488
PEP Infomation

pacid=37471111 transcript=PGSC0003DMT400031697 locus=PGSC0003DMG400012162 ID=PGSC0003DMT400031697.v4.03 annot-version=v4.03
Sequence

MSAETKPVINSLTRSTWNSGKAYDLKPMVSSSISQASSIPELISYLKSAFRDKEFSLVEG
ILMDREKQLRTEIQNLKRDFDSVKTGRDLAEKDQAIVDLEKLNMENRLKDMQRKYEELKN
EKAEVEAKLKMYLEKFKELESRVSLQEEEAAKNRAVDVSVIQKMVEDLEAEDDDDAVEVN
SKASGADGDLQEKQLSPPRAPSVDSTANGNGNGSGKSRDEAAGSGNTDFISTKVNLVNCP
DVQTLHPMPSAGGSAQVNSNVSNIEKKRRRSEEADPLLINLACENRAPTIDLSACEAKGC
VKKNLNTASGRAGSSTVVHISDSDDENAKACVSKSNDVGRNLTFPHQIKEEDVKETSVSK
RKRSLCDSDNGGGSSFSKLKTRSIQELNRDGKLAFSHDNSHKPVFVRRCDDKDGGKSYSQ
LSSRRSDLYKLDGTGDDSSSDSENDPLSDKSMNMLIQRITKRKIFSSEDDLRSSFEKDPE
LCMNAICALYRHQISPNISSKGFFATTRQGLSQSDKISIAALGEYLMDGDPENKLRKAVE
EVRPKDHAECKRLATKYCDQLYQIYLNKEDRLFLPISKF*

Transcript Sequence

Transcript ID

PGSC0003DMT400031697
Transcript Infomation

pacid=37471111 locus=PGSC0003DMG400012162 ID=PGSC0003DMT400031697.v4.03 annot-version=v4.03
Sequence

ATGAGTGCTGAGACGAAACCGGTGATTAACTCGCTTACTAGAAGCACATGGAACTCAGGA
AAAGCGTACGATTTGAAACCAATGGTTTCCTCCTCTATTTCGCAAGCTTCCTCTATACCG
GAACTGATTTCGTATCTAAAATCGGCTTTTCGTGATAAGGAGTTCTCTCTGGTTGAAGGA
ATTCTAATGGACCGTGAAAAACAGCTGCGGACAGAAATTCAAAATCTTAAGAGAGATTTT
GATTCTGTAAAGACTGGGCGAGATTTAGCAGAGAAGGATCAGGCTATAGTTGACCTGGAA
AAGTTAAATATGGAGAATCGATTGAAGGATATGCAGAGGAAATATGAGGAGCTAAAAAAT
GAAAAAGCTGAAGTTGAGGCAAAACTGAAGATGTATTTGGAAAAGTTCAAAGAGTTGGAA
AGTAGAGTATCACTTCAGGAGGAAGAAGCTGCTAAAAATCGTGCTGTGGATGTCTCAGTG
ATCCAAAAAATGGTAGAAGATTTGGAAGCGGAGGATGATGATGATGCTGTAGAAGTGAAT
AGTAAAGCTTCTGGTGCTGATGGAGATCTTCAGGAAAAACAGTTGTCACCACCTAGGGCT
CCATCGGTTGATTCAACTGCAAATGGAAATGGAAATGGAAGTGGTAAATCAAGAGATGAA
GCTGCAGGCAGTGGTAACACGGACTTCATTTCAACAAAAGTGAATCTGGTTAATTGTCCT
GATGTCCAGACATTGCATCCCATGCCTTCTGCTGGTGGTTCTGCTCAAGTCAATAGCAAT
GTTTCCAACATAGAAAAGAAAAGACGTCGTTCAGAGGAAGCAGACCCTCTCCTTATCAAC
TTGGCTTGTGAGAATAGAGCACCTACTATAGATCTATCAGCATGCGAAGCAAAAGGCTGT
GTTAAGAAAAACTTGAATACAGCATCTGGCAGGGCTGGGTCTTCAACTGTTGTTCACATT
AGCGACAGCGATGATGAGAATGCAAAGGCTTGTGTTTCTAAAAGTAATGATGTAGGCAGG
AATTTAACATTTCCACACCAGATAAAAGAAGAGGATGTAAAGGAAACTTCAGTGTCCAAG
AGGAAAAGAAGCTTATGTGATAGTGACAATGGTGGTGGTTCTTCATTTAGCAAACTAAAG
ACTAGATCTATTCAAGAATTAAATCGTGATGGAAAGCTGGCCTTTTCTCATGACAATTCC
CATAAACCGGTGTTCGTAAGACGATGCGATGACAAAGATGGAGGGAAGTCTTATTCTCAA
CTATCTTCCAGAAGATCTGATTTATACAAGCTTGATGGGACTGGTGATGATAGTTCTTCA
GATTCGGAGAATGATCCCTTGAGTGACAAAAGTATGAATATGTTAATCCAAAGAATTACA
AAACGCAAAATTTTCTCGTCGGAAGATGATTTGAGGTCATCCTTTGAGAAGGACCCTGAA
CTTTGTATGAATGCGATATGTGCACTTTATAGGCACCAAATTTCTCCAAACATCTCTTCC
AAGGGCTTTTTTGCTACCACAAGACAGGGGTTGAGTCAATCTGATAAAATCAGCATAGCT
GCTTTGGGTGAATATCTGATGGATGGGGATCCAGAAAATAAACTCAGAAAAGCCGTGGAA
GAAGTACGTCCAAAGGATCATGCAGAATGTAAAAGATTAGCTACTAAATACTGCGACCAA
CTATATCAGATATACCTTAACAAGGAGGATCGTTTGTTCCTCCCAATCTCTAAGTTCTAG