Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031664
CDS Infomation

pacid=37468436 polypeptide=PGSC0003DMP400021463 locus=PGSC0003DMG400012141 ID=PGSC0003DMT400031664.v4.03 annot-version=v4.03
Sequence

ATGTCTGCTGTTGATGTGGCTTTGAGTCCGGTTCAGGAAGAGTCTGTCCGGGCTACAAGA
CATATCTATGGCCCATTGGCGCTTTGCACGAATGAATCAATTGTAATATATATCACTGTG
GCTGGTTCTGTGATTCCAATGCGCGTGTTGGAGTCTGATTCGATTGGTGAAGTGAAACTT
AAGCTCCAAACTTGTAAAGGGTTTGTGGTTAAGATGCAGAAGCTAGTTTTTGGTGGTAGA
GAGCTGGCAAGAAATGAATCTTTGGTCAGGGACTATGGAGTCAGTAATGGGAATGTGTTG
CATATGGTCTTCAAGATCTCTGATCTCCTTGTTATCACTGTTAGGACCACTTGTGGCATG
GAATTTGAATTTCCTGTTGACAGGCATCAAGATATTGGGTACCTTAAACGTACCATATTG
AAGAAAGGCAAAGACTTTGGTGAGGAGCTTAAGGTTCAAGAGCTTTTCTGTAATGGTGAG
AAGCTTGAGGATCAGAAGCTCATTGATGATATTACTGCTGATGCAGTGATTCACCTGGTA
ATTCAGAAATTTGCAAAGCTTCGGGCTAAGCATGCCGAGAGGGATGTTGAACTTTCTGTT
GTTGCAGCTAATTGGAATGAGGAGACCCAAAGTCAGGGTGTACATGAACCATCCAGGGAG
TTCCAGTCCTTCTCCAAGAAGGCACCTGATAGAAACTTGTTGTTGGAACCTTTTGTTGTT
GATCCAAATATTGAACTGCCTGGATATATCTGGGACATGATCAACTCTGCATGTGATGGA
TTGACGAAAGGCAATATACCTATCCGATCATCTGAAGGGACTGGAGGAACTTATTTCATG
CAGGATGGGTCTGGCAACAAGTATGTTGCTATTTTTAAGCCCATTGATGAGGAACCTCTA
GCTGTGAATAACCCTCAAGGACTACCTTTATCAACCAATGGTGAAGGGTTGAAAAGGGGA
ACCCGAGTTGGAGAAGGTGCATTCAGGGAGGTTGCAGCTTTCCTACTGGACCATCCAAGG
ACCGGGCACCGAACATTGTCCAATTGTGAGATAGGCTTTTCCGGTGTGCCTCCCACTGTT
ATGGTTCAGTGCTTGCACAATACATTTCATCATCCTGATGGATTTGAGTGGTCATCCGAA
TACACCAAAGTTGGTTCACTGCAGCTGTTTATGAAGAATGAAGGAAATTGTGAGGATATG
GGTCCAGGAATATTTCCTGTTGAGGAAGTCCATAAGATTACTGTCTTTGACATAAGAACA
GCAAATGCTGATAGGCATGCTGGGAATATTCTTGTGAGCAGGGAAGGGAAAGAAGGACGA
ATTGTGCTTACACCAATTGACCATGGCTACTGCTTGCCTGAGAATTTTGAAGATTGCACC
TTTGATTGGCTCTATTGGCCACAAGCCCGTAAACCTTACTCTCCAGAAACTATCAAGTAC
ATCAAATCACTGGATGCTGAACAAGACATTGACCTTCTTAAATTTTACGGATTGGATTTG
TCTGTTGAATGTGCTCGTACTCTTCGTATCTCAACCATGCTTCTGAAGAAAGGGGTAGAG
AAAGGACTTGCTCCATTTGACATTGGAAACATGATGTGCAGGGAAACCTTGAACAAGGAA
TCTGTTATCGAGGAAATCATTCGTGATGCTCAAGATTCTATGCTTCCTGGCATGACTGAA
GCTACATTTCTTGAAACTGTCTACAAGCTCATGGATATCAAGCTTGAGAAGCTAAAATAT
AAATCTTCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021463
PEP Infomation

pacid=37468436 transcript=PGSC0003DMT400031664 locus=PGSC0003DMG400012141 ID=PGSC0003DMT400031664.v4.03 annot-version=v4.03
Sequence

MSAVDVALSPVQEESVRATRHIYGPLALCTNESIVIYITVAGSVIPMRVLESDSIGEVKL
KLQTCKGFVVKMQKLVFGGRELARNESLVRDYGVSNGNVLHMVFKISDLLVITVRTTCGM
EFEFPVDRHQDIGYLKRTILKKGKDFGEELKVQELFCNGEKLEDQKLIDDITADAVIHLV
IQKFAKLRAKHAERDVELSVVAANWNEETQSQGVHEPSREFQSFSKKAPDRNLLLEPFVV
DPNIELPGYIWDMINSACDGLTKGNIPIRSSEGTGGTYFMQDGSGNKYVAIFKPIDEEPL
AVNNPQGLPLSTNGEGLKRGTRVGEGAFREVAAFLLDHPRTGHRTLSNCEIGFSGVPPTV
MVQCLHNTFHHPDGFEWSSEYTKVGSLQLFMKNEGNCEDMGPGIFPVEEVHKITVFDIRT
ANADRHAGNILVSREGKEGRIVLTPIDHGYCLPENFEDCTFDWLYWPQARKPYSPETIKY
IKSLDAEQDIDLLKFYGLDLSVECARTLRISTMLLKKGVEKGLAPFDIGNMMCRETLNKE
SVIEEIIRDAQDSMLPGMTEATFLETVYKLMDIKLEKLKYKSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400031664
Transcript Infomation

pacid=37468436 locus=PGSC0003DMG400012141 ID=PGSC0003DMT400031664.v4.03 annot-version=v4.03
Sequence

ATGTCTGCTGTTGATGTGGCTTTGAGTCCGGTTCAGGAAGAGTCTGTCCGGGCTACAAGA
CATATCTATGGCCCATTGGCGCTTTGCACGAATGAATCAATTGTAATATATATCACTGTG
GCTGGTTCTGTGATTCCAATGCGCGTGTTGGAGTCTGATTCGATTGGTGAAGTGAAACTT
AAGCTCCAAACTTGTAAAGGGTTTGTGGTTAAGATGCAGAAGCTAGTTTTTGGTGGTAGA
GAGCTGGCAAGAAATGAATCTTTGGTCAGGGACTATGGAGTCAGTAATGGGAATGTGTTG
CATATGGTCTTCAAGATCTCTGATCTCCTTGTTATCACTGTTAGGACCACTTGTGGCATG
GAATTTGAATTTCCTGTTGACAGGCATCAAGATATTGGGTACCTTAAACGTACCATATTG
AAGAAAGGCAAAGACTTTGGTGAGGAGCTTAAGGTTCAAGAGCTTTTCTGTAATGGTGAG
AAGCTTGAGGATCAGAAGCTCATTGATGATATTACTGCTGATGCAGTGATTCACCTGGTA
ATTCAGAAATTTGCAAAGCTTCGGGCTAAGCATGCCGAGAGGGATGTTGAACTTTCTGTT
GTTGCAGCTAATTGGAATGAGGAGACCCAAAGTCAGGGTGTACATGAACCATCCAGGGAG
TTCCAGTCCTTCTCCAAGAAGGCACCTGATAGAAACTTGTTGTTGGAACCTTTTGTTGTT
GATCCAAATATTGAACTGCCTGGATATATCTGGGACATGATCAACTCTGCATGTGATGGA
TTGACGAAAGGCAATATACCTATCCGATCATCTGAAGGGACTGGAGGAACTTATTTCATG
CAGGATGGGTCTGGCAACAAGTATGTTGCTATTTTTAAGCCCATTGATGAGGAACCTCTA
GCTGTGAATAACCCTCAAGGACTACCTTTATCAACCAATGGTGAAGGGTTGAAAAGGGGA
ACCCGAGTTGGAGAAGGTGCATTCAGGGAGGTTGCAGCTTTCCTACTGGACCATCCAAGG
ACCGGGCACCGAACATTGTCCAATTGTGAGATAGGCTTTTCCGGTGTGCCTCCCACTGTT
ATGGTTCAGTGCTTGCACAATACATTTCATCATCCTGATGGATTTGAGTGGTCATCCGAA
TACACCAAAGTTGGTTCACTGCAGCTGTTTATGAAGAATGAAGGAAATTGTGAGGATATG
GGTCCAGGAATATTTCCTGTTGAGGAAGTCCATAAGATTACTGTCTTTGACATAAGAACA
GCAAATGCTGATAGGCATGCTGGGAATATTCTTGTGAGCAGGGAAGGGAAAGAAGGACGA
ATTGTGCTTACACCAATTGACCATGGCTACTGCTTGCCTGAGAATTTTGAAGATTGCACC
TTTGATTGGCTCTATTGGCCACAAGCCCGTAAACCTTACTCTCCAGAAACTATCAAGTAC
ATCAAATCACTGGATGCTGAACAAGACATTGACCTTCTTAAATTTTACGGATTGGATTTG
TCTGTTGAATGTGCTCGTACTCTTCGTATCTCAACCATGCTTCTGAAGAAAGGGGTAGAG
AAAGGACTTGCTCCATTTGACATTGGAAACATGATGTGCAGGGAAACCTTGAACAAGGAA
TCTGTTATCGAGGAAATCATTCGTGATGCTCAAGATTCTATGCTTCCTGGCATGACTGAA
GCTACATTTCTTGAAACTGTCTACAAGCTCATGGATATCAAGCTTGAGAAGCTAAAATAT
AAATCTTCCTAA