Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031627
CDS Infomation

pacid=37470651 polypeptide=PGSC0003DMP400021443 locus=PGSC0003DMG400012129 ID=PGSC0003DMT400031627.v4.03 annot-version=v4.03
Sequence

ATGGCAATCGCTTCGCCATCGACTCCATCTTTCTCGGCATCTATCTGCTGTACTCGTACT
GACTCAACTCCAGCTCGTTCACTTCGATTCCCGCCGATCCAAACTCGGCTTCAATCTCGG
CAATTCACGTTGTCTTGTCGGTCCTCTGTGCCTTCATCAAATGAATCCGACGGCGATCTC
CAGTACGAGATTCAGCATGGAGTTTCTACTGACCATCGACGGCGCGGTTCGCTGGTGTTC
GTCACTCTTCCGCTTGATGCTCTTAATTTCCCGGTAGGGACTATGAAGAGGAAGAAGGCG
ATGGTGCAGTCGTTTCGTGCTTTGGCGGCCGCTGGTGTTGAAGGAGTTGTGATGGAGGTA
TGGTGGGGACTGGTGGAGAGTGAATTGCCTAGGGTTTATAATTGGGAAGGGTATTTGGAG
ATTGTGGTGTTGGCTAAACATTGTGGATTGAAAGTTCGAGCTGAAATGGCATTTCATCAA
TGCGGTACAGGGCCTGATGATCCTTTCTGGATTCCTCTTCCTCAGTGGGTTCGTGAAGAA
ATCGATAAAGATCCAGATTTAGCATATTCAGACAGGTTTGGAAGACGGAATATGGAATAT
ATATCCATAGGATGTGATGTTCTTCCCGTTCTGCACGGACGATCTCCGATCCAAGCATAT
ACTGAATTTATGAGGAGCTTCCGTGACACCTTCATACCATTTTTTGGTGGCGTCATAACT
GGTATCCAAGTTGGAATGGGCCCTGCTGGTGAGTTGAGATATCCTTCATTCCCTTCACAG
AAGACAGCTCGGACTTTGCGATCACGTGAACTTGGCGAATTCCAATGCCATGATAAGTAT
ATGCTTGCATCTTTAAATGCTTGTGCTGGGGATATAGGAATGCGTGAGTGGGCCAATGGC
GGACCTATTGGTGCGGGCAGTTTAATGCAAAATCCTGAAGGCTCAGAGTTTTTCAAAAGT
GATGGTTCTTGGAACTCACCATATGGAGAGTTCTTCCTTGCATGGTACTCAGGGATGTTG
CTGCTTCACGGTGAGAGGATTTGTAGGGAAGCAGAGTCTATATTCCGTGGTCTTGAAGTT
AATTTGTCAGGGAAAGTGGCTGGGATTCACTGGCATTATCGTACAGAGTCTCACCCGTCT
GAGCTAACGGCTGGCTACTACAATACATCAATTCGAGATGGTTTGCTGCCAATTGCTCGC
CTGTTTGGCAGATATGGTTTTTCCATGTGTTGTACATGTTTCGAGATGCAAGATGCAGAA
GCGCAGCAGATGAATCCTGACAGTAGTCCTGAAAGTTTTGTAAAACAACTTTCACTTGCC
GCTAGGTTATGTGACATTCCTCTGCAAGGTGAAAACTGTGCAAGTAGCTTGGATGACGGA
TCATTTGAACAGGTGTTACGGATGTCTAGGTTCAACTGGAATGGTCCAGGAACTCCAACC
TTCTCATTCAATTTTGTCAGGATGGACAAGAACTTGTTTGAATATCGGAATTGGGTTAGC
TTTACTCGTTTTGTGAGACAAATGTCAGATGCCAAATTTTTTCGACCCAACCTAGGCTTC
GGGGATGGTGATATGCCATTTTTGTCTTTATCAGCATCCTCCACTGCTGGAGTGGTTCTT
GCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400021443
PEP Infomation

pacid=37470651 transcript=PGSC0003DMT400031627 locus=PGSC0003DMG400012129 ID=PGSC0003DMT400031627.v4.03 annot-version=v4.03
Sequence

MAIASPSTPSFSASICCTRTDSTPARSLRFPPIQTRLQSRQFTLSCRSSVPSSNESDGDL
QYEIQHGVSTDHRRRGSLVFVTLPLDALNFPVGTMKRKKAMVQSFRALAAAGVEGVVMEV
WWGLVESELPRVYNWEGYLEIVVLAKHCGLKVRAEMAFHQCGTGPDDPFWIPLPQWVREE
IDKDPDLAYSDRFGRRNMEYISIGCDVLPVLHGRSPIQAYTEFMRSFRDTFIPFFGGVIT
GIQVGMGPAGELRYPSFPSQKTARTLRSRELGEFQCHDKYMLASLNACAGDIGMREWANG
GPIGAGSLMQNPEGSEFFKSDGSWNSPYGEFFLAWYSGMLLLHGERICREAESIFRGLEV
NLSGKVAGIHWHYRTESHPSELTAGYYNTSIRDGLLPIARLFGRYGFSMCCTCFEMQDAE
AQQMNPDSSPESFVKQLSLAARLCDIPLQGENCASSLDDGSFEQVLRMSRFNWNGPGTPT
FSFNFVRMDKNLFEYRNWVSFTRFVRQMSDAKFFRPNLGFGDGDMPFLSLSASSTAGVVL
A*

Transcript Sequence

Transcript ID

PGSC0003DMT400031627
Transcript Infomation

pacid=37470651 locus=PGSC0003DMG400012129 ID=PGSC0003DMT400031627.v4.03 annot-version=v4.03
Sequence

ATGGCAATCGCTTCGCCATCGACTCCATCTTTCTCGGCATCTATCTGCTGTACTCGTACT
GACTCAACTCCAGCTCGTTCACTTCGATTCCCGCCGATCCAAACTCGGCTTCAATCTCGG
CAATTCACGTTGTCTTGTCGGTCCTCTGTGCCTTCATCAAATGAATCCGACGGCGATCTC
CAGTACGAGATTCAGCATGGAGTTTCTACTGACCATCGACGGCGCGGTTCGCTGGTGTTC
GTCACTCTTCCGCTTGATGCTCTTAATTTCCCGGTAGGGACTATGAAGAGGAAGAAGGCG
ATGGTGCAGTCGTTTCGTGCTTTGGCGGCCGCTGGTGTTGAAGGAGTTGTGATGGAGGTA
TGGTGGGGACTGGTGGAGAGTGAATTGCCTAGGGTTTATAATTGGGAAGGGTATTTGGAG
ATTGTGGTGTTGGCTAAACATTGTGGATTGAAAGTTCGAGCTGAAATGGCATTTCATCAA
TGCGGTACAGGGCCTGATGATCCTTTCTGGATTCCTCTTCCTCAGTGGGTTCGTGAAGAA
ATCGATAAAGATCCAGATTTAGCATATTCAGACAGGTTTGGAAGACGGAATATGGAATAT
ATATCCATAGGATGTGATGTTCTTCCCGTTCTGCACGGACGATCTCCGATCCAAGCATAT
ACTGAATTTATGAGGAGCTTCCGTGACACCTTCATACCATTTTTTGGTGGCGTCATAACT
GGTATCCAAGTTGGAATGGGCCCTGCTGGTGAGTTGAGATATCCTTCATTCCCTTCACAG
AAGACAGCTCGGACTTTGCGATCACGTGAACTTGGCGAATTCCAATGCCATGATAAGTAT
ATGCTTGCATCTTTAAATGCTTGTGCTGGGGATATAGGAATGCGTGAGTGGGCCAATGGC
GGACCTATTGGTGCGGGCAGTTTAATGCAAAATCCTGAAGGCTCAGAGTTTTTCAAAAGT
GATGGTTCTTGGAACTCACCATATGGAGAGTTCTTCCTTGCATGGTACTCAGGGATGTTG
CTGCTTCACGGTGAGAGGATTTGTAGGGAAGCAGAGTCTATATTCCGTGGTCTTGAAGTT
AATTTGTCAGGGAAAGTGGCTGGGATTCACTGGCATTATCGTACAGAGTCTCACCCGTCT
GAGCTAACGGCTGGCTACTACAATACATCAATTCGAGATGGTTTGCTGCCAATTGCTCGC
CTGTTTGGCAGATATGGTTTTTCCATGTGTTGTACATGTTTCGAGATGCAAGATGCAGAA
GCGCAGCAGATGAATCCTGACAGTAGTCCTGAAAGTTTTGTAAAACAACTTTCACTTGCC
GCTAGGTTATGTGACATTCCTCTGCAAGGTGAAAACTGTGCAAGTAGCTTGGATGACGGA
TCATTTGAACAGGTGTTACGGATGTCTAGGTTCAACTGGAATGGTCCAGGAACTCCAACC
TTCTCATTCAATTTTGTCAGGATGGACAAGAACTTGTTTGAATATCGGAATTGGGTTAGC
TTTACTCGTTTTGTGAGACAAATGTCAGATGCCAAATTTTTTCGACCCAACCTAGGCTTC
GGGGATGGTGATATGCCATTTTTGTCTTTATCAGCATCCTCCACTGCTGGAGTGGTTCTT
GCATAG