Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031598
CDS Infomation

pacid=37468038 polypeptide=PGSC0003DMP400021422 locus=PGSC0003DMG400012123 ID=PGSC0003DMT400031598.v4.03 annot-version=v4.03
Sequence

ATGGCGGGAAGCAGTAGTGGGAAGCTGATACAAGACCTTATACTGTACGCTGCAAGCGCA
GCATTAAGCATGGCTGTGTTATTTGTTGGGCTTCGCCATCTCGACCCGAATCGCGAAGCT
TCTAAGAAAGCTATTGAATCCCGCAAACACCTCTCCAAACGCTTAGGTCGCACTCTTATT
TACACCACTCCCTATGAGGATATGATAACTGGGGATGTTGTGAATCCAGACCACATAGAT
GTGGAGTTTGATTCGATTGGGGGGCTGGATGGTATTAAGGAAACTTTGTTTCAGCTGGCC
ATTTTACCTCTGCGAAGGCCGGAGTTATTTTGTCATGGAAAATTGCTTGGTCCAATGAAA
GGGGTTCTATTGTATGGACCACCTGGGACAGGGAAGACAATGCTTGCTAAAGCGATTGCC
AAAGAGTCTGGTGCTGTGTTCATAAATGTCAAGGTTTCTACTCTAATGAGCAAGTGGTTT
GGTGACGCCCAAAAGCTCGTTGCTGCTGTTTTTAGCTTGGCCTACAAGCTCCAGCCAGCT
ATAATATTTATTGATGAAGTTGACAGTTTTTTGGGCCAGCGTCGTTCAACAGATACTGAA
ATGCTGACTAGCATGAAAACTGAGTTCATGGCCTTATGGGATGGTTTTACTACTGATCAG
AATGCTAGAGTAATGGTCCTGGCAGCAACCAATCGCCCAAGTGACCTTGATGAGGCAATA
ATTAGACGCTTTTCTCAGGCATTTGAGATTGGAAAACCTTCTCTTAGTGATAGAACAAAG
ATACTGAAGGTAGTTTTGAAGGGTGAGAGAATCGAAGATAACATTGATTTTGATCGACTT
GCTAGCTTGTGTGAGGGATACACTGGTTCAGACATTCTTGAAGCCTGCAAGCAAGCTGCC
TTTATTCCTCTTAGGGAGTATTTGCAAGATGAGAAGAAAGGAGAGCAATCACAGGCACCA
AGACCATTGTCACAGTCTGATATAGAGAGAGCATTGGCTGAATCAAAGAGGACCAGGGTT
TCTGCTAAGAAACCAACTATTGTGAGCTTTCGGTTGGATGACTATGAGGATTTAGACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400021422
PEP Infomation

pacid=37468038 transcript=PGSC0003DMT400031598 locus=PGSC0003DMG400012123 ID=PGSC0003DMT400031598.v4.03 annot-version=v4.03
Sequence

MAGSSSGKLIQDLILYAASAALSMAVLFVGLRHLDPNREASKKAIESRKHLSKRLGRTLI
YTTPYEDMITGDVVNPDHIDVEFDSIGGLDGIKETLFQLAILPLRRPELFCHGKLLGPMK
GVLLYGPPGTGKTMLAKAIAKESGAVFINVKVSTLMSKWFGDAQKLVAAVFSLAYKLQPA
IIFIDEVDSFLGQRRSTDTEMLTSMKTEFMALWDGFTTDQNARVMVLAATNRPSDLDEAI
IRRFSQAFEIGKPSLSDRTKILKVVLKGERIEDNIDFDRLASLCEGYTGSDILEACKQAA
FIPLREYLQDEKKGEQSQAPRPLSQSDIERALAESKRTRVSAKKPTIVSFRLDDYEDLD*

Transcript Sequence

Transcript ID

PGSC0003DMT400031598
Transcript Infomation

pacid=37468038 locus=PGSC0003DMG400012123 ID=PGSC0003DMT400031598.v4.03 annot-version=v4.03
Sequence

ATGGCGGGAAGCAGTAGTGGGAAGCTGATACAAGACCTTATACTGTACGCTGCAAGCGCA
GCATTAAGCATGGCTGTGTTATTTGTTGGGCTTCGCCATCTCGACCCGAATCGCGAAGCT
TCTAAGAAAGCTATTGAATCCCGCAAACACCTCTCCAAACGCTTAGGTCGCACTCTTATT
TACACCACTCCCTATGAGGATATGATAACTGGGGATGTTGTGAATCCAGACCACATAGAT
GTGGAGTTTGATTCGATTGGGGGGCTGGATGGTATTAAGGAAACTTTGTTTCAGCTGGCC
ATTTTACCTCTGCGAAGGCCGGAGTTATTTTGTCATGGAAAATTGCTTGGTCCAATGAAA
GGGGTTCTATTGTATGGACCACCTGGGACAGGGAAGACAATGCTTGCTAAAGCGATTGCC
AAAGAGTCTGGTGCTGTGTTCATAAATGTCAAGGTTTCTACTCTAATGAGCAAGTGGTTT
GGTGACGCCCAAAAGCTCGTTGCTGCTGTTTTTAGCTTGGCCTACAAGCTCCAGCCAGCT
ATAATATTTATTGATGAAGTTGACAGTTTTTTGGGCCAGCGTCGTTCAACAGATACTGAA
ATGCTGACTAGCATGAAAACTGAGTTCATGGCCTTATGGGATGGTTTTACTACTGATCAG
AATGCTAGAGTAATGGTCCTGGCAGCAACCAATCGCCCAAGTGACCTTGATGAGGCAATA
ATTAGACGCTTTTCTCAGGCATTTGAGATTGGAAAACCTTCTCTTAGTGATAGAACAAAG
ATACTGAAGGTAGTTTTGAAGGGTGAGAGAATCGAAGATAACATTGATTTTGATCGACTT
GCTAGCTTGTGTGAGGGATACACTGGTTCAGACATTCTTGAAGCCTGCAAGCAAGCTGCC
TTTATTCCTCTTAGGGAGTATTTGCAAGATGAGAAGAAAGGAGAGCAATCACAGGCACCA
AGACCATTGTCACAGTCTGATATAGAGAGAGCATTGGCTGAATCAAAGAGGACCAGGGTT
TCTGCTAAGAAACCAACTATTGTGAGCTTTCGGTTGGATGACTATGAGGATTTAGACTGA