Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031576
CDS Infomation

pacid=37468055 polypeptide=PGSC0003DMP400021405 locus=PGSC0003DMG400012115 ID=PGSC0003DMT400031576.v4.03 annot-version=v4.03
Sequence

ATGGGAAAGAAAAAGGGAGGTACTTCATGGTTGAGTGCTGTTAAGAGGGCTTTCAGGTCA
CCAACTAAAGATAACAGCTGCGACAAAAAGGCAAAAATAGAGCATGAACTAGACGAAGAT
GAAGAAAAGAAAAGAGAGAAGAGAAGGTGGTTATTCAGAAAACAGTCACAAAATGAAGGG
AAAGTAATTGTTGATCCAAAGCATGCAACAGCAGCAGCAGCTGTGGCCACTGCTCAAGCA
GCAGTTGAGATCATAAGGTTGACACGATCTTCCAATAATCCGTCTTCTAACAGGCAACAC
AATGCTGCTGTACTCATCCAAACAGCATTCAGAGGCTATCTGGCAAGGAGGGCACTAATT
GCATTGAAGGGGATAGTGAAGCTTCAAGCATTAATAAGGGGTCAAAATGTACGAAAGCAA
GCTAAGATGACACTGAAATGTATGCAAGCTCTGCTGAGGGTGCAGGCTCGGGTTCGTGAA
CAACGCGCTCGCCTTTCACATGATGGAGGCCGCAGGTCCATGTTTGCTGAAACAACCAAT
TTATGGGACTCTAAATATCTCCGTGACATCCGAGATAGGAAGTCCAGATCTAGAGATGGA
AGCTCAATTGCAGACGATTGTCCGAGATCACTTCTAGAGCTGGAATCAATGTTACAAGCC
AGAAAAGAAGCCTCCTTCAAACGGGAAAAATCCCTTGCTCATGCTTTTACTCAACAGGAA
TTGGATGAGATGGATGTTTGTAGTGAAGAAAGAAATGAAAGGGAACTAGAAGAGACAGCG
AATTGGCTAGACGAGTGGATGTCATCAAAGCAATGGAACACCAGCAACAGAGGTTCATTT
GACAGAAGAGACTCTATAAAGACTGTTGAGATGGACACGGCTAAGCCATATTCTAACATG
GTTCCAAATGCTCGAAGATCACAACACTCGAGCCCACTTCACAGACAGGCTAGTAGTCCT
CATTATATTGCTAATTCTCCCCATCACCAGAGATCATCACATTACAATTACTCGGCAATT
CAACCACCAGCCACCCCGCCCCCTTGTCAACCAAAACCTCTTCAAATGCGCCCAACAAGC
CCACGTAAAAGCCAATCAACTGCAAACACTCCATGCCTACGCTCTACGAGCCGTTCAAAC
AGTATAATGTCCCGGTATAGCACGTCAGGAAACGATGCATCAGTTCCTAACTATATGGCT
GCCACTGAGTCTGCAAAAGCTCGGATTCGTTCACAAAGCACACCTAAACAAAGGCCTTCC
ACACCAGAAAGAGAAAGAGTTGGATCGGTGAAAAAACGCCTCTCTTACCCTATTCCTGAG
CCATACTCGCTAAACGCTGCGTATGGCTACAGTCAGAACTTGAGAAGTCCTAGCTTCAAA
AGTCTTCAAGCTGCCTATGTTGGGATGGAACAACAATCATGTTACACCGACAGCCTTGGT
GGAGAAATTTCTCCTTGTTCAACCACAGATTTAAGGAGATGGTTAAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400021405
PEP Infomation

pacid=37468055 transcript=PGSC0003DMT400031576 locus=PGSC0003DMG400012115 ID=PGSC0003DMT400031576.v4.03 annot-version=v4.03
Sequence

MGKKKGGTSWLSAVKRAFRSPTKDNSCDKKAKIEHELDEDEEKKREKRRWLFRKQSQNEG
KVIVDPKHATAAAAVATAQAAVEIIRLTRSSNNPSSNRQHNAAVLIQTAFRGYLARRALI
ALKGIVKLQALIRGQNVRKQAKMTLKCMQALLRVQARVREQRARLSHDGGRRSMFAETTN
LWDSKYLRDIRDRKSRSRDGSSIADDCPRSLLELESMLQARKEASFKREKSLAHAFTQQE
LDEMDVCSEERNERELEETANWLDEWMSSKQWNTSNRGSFDRRDSIKTVEMDTAKPYSNM
VPNARRSQHSSPLHRQASSPHYIANSPHHQRSSHYNYSAIQPPATPPPCQPKPLQMRPTS
PRKSQSTANTPCLRSTSRSNSIMSRYSTSGNDASVPNYMAATESAKARIRSQSTPKQRPS
TPERERVGSVKKRLSYPIPEPYSLNAAYGYSQNLRSPSFKSLQAAYVGMEQQSCYTDSLG
GEISPCSTTDLRRWLR*

Transcript Sequence

Transcript ID

PGSC0003DMT400031576
Transcript Infomation

pacid=37468055 locus=PGSC0003DMG400012115 ID=PGSC0003DMT400031576.v4.03 annot-version=v4.03
Sequence

ATGGGAAAGAAAAAGGGAGGTACTTCATGGTTGAGTGCTGTTAAGAGGGCTTTCAGGTCA
CCAACTAAAGATAACAGCTGCGACAAAAAGGCAAAAATAGAGCATGAACTAGACGAAGAT
GAAGAAAAGAAAAGAGAGAAGAGAAGGTGGTTATTCAGAAAACAGTCACAAAATGAAGGG
AAAGTAATTGTTGATCCAAAGCATGCAACAGCAGCAGCAGCTGTGGCCACTGCTCAAGCA
GCAGTTGAGATCATAAGGTTGACACGATCTTCCAATAATCCGTCTTCTAACAGGCAACAC
AATGCTGCTGTACTCATCCAAACAGCATTCAGAGGCTATCTGGCAAGGAGGGCACTAATT
GCATTGAAGGGGATAGTGAAGCTTCAAGCATTAATAAGGGGTCAAAATGTACGAAAGCAA
GCTAAGATGACACTGAAATGTATGCAAGCTCTGCTGAGGGTGCAGGCTCGGGTTCGTGAA
CAACGCGCTCGCCTTTCACATGATGGAGGCCGCAGGTCCATGTTTGCTGAAACAACCAAT
TTATGGGACTCTAAATATCTCCGTGACATCCGAGATAGGAAGTCCAGATCTAGAGATGGA
AGCTCAATTGCAGACGATTGTCCGAGATCACTTCTAGAGCTGGAATCAATGTTACAAGCC
AGAAAAGAAGCCTCCTTCAAACGGGAAAAATCCCTTGCTCATGCTTTTACTCAACAGGAA
TTGGATGAGATGGATGTTTGTAGTGAAGAAAGAAATGAAAGGGAACTAGAAGAGACAGCG
AATTGGCTAGACGAGTGGATGTCATCAAAGCAATGGAACACCAGCAACAGAGGTTCATTT
GACAGAAGAGACTCTATAAAGACTGTTGAGATGGACACGGCTAAGCCATATTCTAACATG
GTTCCAAATGCTCGAAGATCACAACACTCGAGCCCACTTCACAGACAGGCTAGTAGTCCT
CATTATATTGCTAATTCTCCCCATCACCAGAGATCATCACATTACAATTACTCGGCAATT
CAACCACCAGCCACCCCGCCCCCTTGTCAACCAAAACCTCTTCAAATGCGCCCAACAAGC
CCACGTAAAAGCCAATCAACTGCAAACACTCCATGCCTACGCTCTACGAGCCGTTCAAAC
AGTATAATGTCCCGGTATAGCACGTCAGGAAACGATGCATCAGTTCCTAACTATATGGCT
GCCACTGAGTCTGCAAAAGCTCGGATTCGTTCACAAAGCACACCTAAACAAAGGCCTTCC
ACACCAGAAAGAGAAAGAGTTGGATCGGTGAAAAAACGCCTCTCTTACCCTATTCCTGAG
CCATACTCGCTAAACGCTGCGTATGGCTACAGTCAGAACTTGAGAAGTCCTAGCTTCAAA
AGTCTTCAAGCTGCCTATGTTGGGATGGAACAACAATCATGTTACACCGACAGCCTTGGT
GGAGAAATTTCTCCTTGTTCAACCACAGATTTAAGGAGATGGTTAAGATGA