Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031570
CDS Infomation

pacid=37470882 polypeptide=PGSC0003DMP400021400 locus=PGSC0003DMG400012112 ID=PGSC0003DMT400031570.v4.03 annot-version=v4.03
Sequence

ATGGAACCCAATCCCAATCCCAATCCCATCTCCTCTTCTCTTCTCCTCTTTCTGCTGTTT
TTTACTCCAACTATGGTGGCTCCTCTAGGTATCAACTACGGGCAAATTGCCAACAATCTT
CCCTTACCGGAAAACGTGGTACCATTAGTCAAATCCATCGGAGCTACCAGAATCAAGCTC
TATGATGCTGACCCACATGTCCTCAAAGCCTTTGCTAACACCGGCGTTGAGTTCATCGTC
AGTCTTGGCAATGAGTACCTTTCCAAGATGAAAGATCCTTCTAAAGCTCAATCATGGGTT
AAAAATAATGTCCAAGCTTACTTACCTGCTACTAAAATCACCTGCATCGCTGTCGGTAAT
GAAGTTCTCACCTTTAACGATACCATCCTCACCGACAACCTCCTCCCTGCAATGCAAAGT
GTCCACACTGCTCTTGTTAATCTCAAATTGGACAAACAAGTCACTGTCACCACCGCACAT
TCTCTTGCTATTCTACAAACTTCCTATCCGCCATCTGCTGGAGCTTTCCGTCGGGATCTT
GTCAACTGTGTTACCCAGATCGTGGACTTCCATTGCAAAACTGGCTCACCTTTTCTGATT
AATGCTTATCCTTACTTTGCTTACAAGGGAAATCCGAAGCAGGTCTCCCTTGATTTCGTG
CTATTTCAGCCCAACTCTGGTATCGTTGATCCAGAGTCCAATCTCCATTACGACAACATG
CTTTTCGCTCAGATCGATGCTGTTCACTCTGCTTTAGCTTCCATCGGGTACAAAAACGTC
TGCGTACAGATCTCGGAGACGGGATGGCCGTCAAAGGGAGACGCCGACGAGGCCGGAGCT
ACACCGGAGAATGCTAGGAAATACAACTGTAATCTGATGAAGCTTATTGGTCAGAAGAAG
GGTACACCCATGAGGCCTAACTCGGATTTGAATATATACGTATTTGCCTTGTTCAATGAG
AACCTCAAGCCTGGTCCTAGTTCGGAGCGAAACTACGGCCTGTTCAAGCCGGACGGATCT
CAGGCTTACCCCTTAGGAGTCCCGGCAATCAACGCAGTGAGTACGAATAGCAGCAACTCC
GGTGGGTCTGGATCTACACTATCAGCGTCAGTGCCGCCAGCAAGCTCCTCCTCCGGTTAT
CTAGCCATTACTTCTGATTCGGGGACAAGTCTTTCTCCCTGCAAAACCTTGCTTCTCTAC
TTTGTGAGCTTTGGATTATGGAAGAAACTTGACAACTACTATCACTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021400
PEP Infomation

pacid=37470882 transcript=PGSC0003DMT400031570 locus=PGSC0003DMG400012112 ID=PGSC0003DMT400031570.v4.03 annot-version=v4.03
Sequence

MEPNPNPNPISSSLLLFLLFFTPTMVAPLGINYGQIANNLPLPENVVPLVKSIGATRIKL
YDADPHVLKAFANTGVEFIVSLGNEYLSKMKDPSKAQSWVKNNVQAYLPATKITCIAVGN
EVLTFNDTILTDNLLPAMQSVHTALVNLKLDKQVTVTTAHSLAILQTSYPPSAGAFRRDL
VNCVTQIVDFHCKTGSPFLINAYPYFAYKGNPKQVSLDFVLFQPNSGIVDPESNLHYDNM
LFAQIDAVHSALASIGYKNVCVQISETGWPSKGDADEAGATPENARKYNCNLMKLIGQKK
GTPMRPNSDLNIYVFALFNENLKPGPSSERNYGLFKPDGSQAYPLGVPAINAVSTNSSNS
GGSGSTLSASVPPASSSSGYLAITSDSGTSLSPCKTLLLYFVSFGLWKKLDNYYHL*

Transcript Sequence

Transcript ID

PGSC0003DMT400031570
Transcript Infomation

pacid=37470882 locus=PGSC0003DMG400012112 ID=PGSC0003DMT400031570.v4.03 annot-version=v4.03
Sequence

ATGGAACCCAATCCCAATCCCAATCCCATCTCCTCTTCTCTTCTCCTCTTTCTGCTGTTT
TTTACTCCAACTATGGTGGCTCCTCTAGGTATCAACTACGGGCAAATTGCCAACAATCTT
CCCTTACCGGAAAACGTGGTACCATTAGTCAAATCCATCGGAGCTACCAGAATCAAGCTC
TATGATGCTGACCCACATGTCCTCAAAGCCTTTGCTAACACCGGCGTTGAGTTCATCGTC
AGTCTTGGCAATGAGTACCTTTCCAAGATGAAAGATCCTTCTAAAGCTCAATCATGGGTT
AAAAATAATGTCCAAGCTTACTTACCTGCTACTAAAATCACCTGCATCGCTGTCGGTAAT
GAAGTTCTCACCTTTAACGATACCATCCTCACCGACAACCTCCTCCCTGCAATGCAAAGT
GTCCACACTGCTCTTGTTAATCTCAAATTGGACAAACAAGTCACTGTCACCACCGCACAT
TCTCTTGCTATTCTACAAACTTCCTATCCGCCATCTGCTGGAGCTTTCCGTCGGGATCTT
GTCAACTGTGTTACCCAGATCGTGGACTTCCATTGCAAAACTGGCTCACCTTTTCTGATT
AATGCTTATCCTTACTTTGCTTACAAGGGAAATCCGAAGCAGGTCTCCCTTGATTTCGTG
CTATTTCAGCCCAACTCTGGTATCGTTGATCCAGAGTCCAATCTCCATTACGACAACATG
CTTTTCGCTCAGATCGATGCTGTTCACTCTGCTTTAGCTTCCATCGGGTACAAAAACGTC
TGCGTACAGATCTCGGAGACGGGATGGCCGTCAAAGGGAGACGCCGACGAGGCCGGAGCT
ACACCGGAGAATGCTAGGAAATACAACTGTAATCTGATGAAGCTTATTGGTCAGAAGAAG
GGTACACCCATGAGGCCTAACTCGGATTTGAATATATACGTATTTGCCTTGTTCAATGAG
AACCTCAAGCCTGGTCCTAGTTCGGAGCGAAACTACGGCCTGTTCAAGCCGGACGGATCT
CAGGCTTACCCCTTAGGAGTCCCGGCAATCAACGCAGTGAGTACGAATAGCAGCAACTCC
GGTGGGTCTGGATCTACACTATCAGCGTCAGTGCCGCCAGCAAGCTCCTCCTCCGGTTAT
CTAGCCATTACTTCTGATTCGGGGACAAGTCTTTCTCCCTGCAAAACCTTGCTTCTCTAC
TTTGTGAGCTTTGGATTATGGAAGAAACTTGACAACTACTATCACTTGTAA