Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031488
CDS Infomation

pacid=37465909 polypeptide=PGSC0003DMP400021354 locus=PGSC0003DMG400012073 ID=PGSC0003DMT400031488.v4.03 annot-version=v4.03
Sequence

ATGGATAGTGAGAATAAGGATTCTGAGCTTAGAAAATTTGGATCATCTCGTACAAGCAGT
GCCAGTTCTTCTCTCAGGAGGCGTTCTTTAAGTTTATCACTCTCTCTTCCTAAACAGCTG
AATGATGATGATGATGAAAACGAATCTGTATCAGAAGCAGGAGATATCGGGGATCGAGAG
CTTCAAAGCAATAGGTACAGTGGGAGTGGCAGGCTAAGATTAATTGGTGAAAATGCACCA
GAACATGGAGTTGTTGTTCCCATTTCAGAGGACACGAGTAGTGTTACTCCAGTATTCCCC
ATAAAATTAATCTCTCAACCCGATCATAAAAAGAATGATGAAAAAACAGAGGTGCCATGG
GTTTTGGAGTATACTTCATGCCTCTTGTTTCTAGCTGTATTTGGAATATTGGGGGTTTTG
TTGAGGTATGGTCTCCAAAAATTATTCGGACCAGGAATAGTTGGTGCCACAAGTGATCAT
AGTTATATGTATCTGGACCTGCCTTCTAACATGGTCGGTTCGTTCTTGATGGGTTGGTTT
GGTGTGGTCTTTAAAGAGGACATTTCCAGAATTTCAAGTCAATTAGCAATTGGATTGTCA
ACTGGTTTTCTAGGAAGCCTTACTACTTTCAGTGGTTGGAACCAAAAGATGCTCGAGCTT
AGTGTTGAAGGGCAGTGGGTTTTTGTAGTTCTTGGCTATCTTCTAGGTTTATTTCTTGTT
GCCTACTCAATCATATTTGGAATTGAGACTGCGAAAGGTGTCAATTGGCTCTACAAAAGA
ACCAATATGAATTCATCCAACTCGGGCACTGACTGCCATTGGAGAGTAGATAGCTGCAAG
CACCATTTAATTGTTATACTCTTTCTACTACTCATTCTAGCATCGCTCTGGGGTATGAGC
ATAGGACTGGAGGTAAATGAATTCAGCAGCGGGAGCCCAAAAGCACAGTTGTGGCTGGCC
TGCATAGTTGGTCCATTTGGTGTGTGGATCAGGTGGTTCTTAGCACGACTAAATGGACGT
GGTTTAGGAAAATCAGGCCTGCTCAAATGGGTGCCCTTTGGGACTTTGATTGCCAATGTA
TCTGCAGCTTGTATCATGGCAGCCCTTGCGACCTTAAAGAAAGCAGTCAACACAGAGACG
TGTGATACAGTTGCTTCTGGTATCCAGTTTGGTCTATTGGGTTGTTTAAGTACAGTTTCC
ACTTTCATTGCTGAATTTCATGCAATGAGAGGAAGCAAGTATCCATGGAGGGCGTATGTG
TACGCTTTGTGTACAACGCTTATATCATTCATCTTGGGGACACTTATATACTCTCTGCCT
GTTTGGGTTGAAAATTTCAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400021354
PEP Infomation

pacid=37465909 transcript=PGSC0003DMT400031488 locus=PGSC0003DMG400012073 ID=PGSC0003DMT400031488.v4.03 annot-version=v4.03
Sequence

MDSENKDSELRKFGSSRTSSASSSLRRRSLSLSLSLPKQLNDDDDENESVSEAGDIGDRE
LQSNRYSGSGRLRLIGENAPEHGVVVPISEDTSSVTPVFPIKLISQPDHKKNDEKTEVPW
VLEYTSCLLFLAVFGILGVLLRYGLQKLFGPGIVGATSDHSYMYLDLPSNMVGSFLMGWF
GVVFKEDISRISSQLAIGLSTGFLGSLTTFSGWNQKMLELSVEGQWVFVVLGYLLGLFLV
AYSIIFGIETAKGVNWLYKRTNMNSSNSGTDCHWRVDSCKHHLIVILFLLLILASLWGMS
IGLEVNEFSSGSPKAQLWLACIVGPFGVWIRWFLARLNGRGLGKSGLLKWVPFGTLIANV
SAACIMAALATLKKAVNTETCDTVASGIQFGLLGCLSTVSTFIAEFHAMRGSKYPWRAYV
YALCTTLISFILGTLIYSLPVWVENFN*

Transcript Sequence

Transcript ID

PGSC0003DMT400031488
Transcript Infomation

pacid=37465909 locus=PGSC0003DMG400012073 ID=PGSC0003DMT400031488.v4.03 annot-version=v4.03
Sequence

ATGGATAGTGAGAATAAGGATTCTGAGCTTAGAAAATTTGGATCATCTCGTACAAGCAGT
GCCAGTTCTTCTCTCAGGAGGCGTTCTTTAAGTTTATCACTCTCTCTTCCTAAACAGCTG
AATGATGATGATGATGAAAACGAATCTGTATCAGAAGCAGGAGATATCGGGGATCGAGAG
CTTCAAAGCAATAGGTACAGTGGGAGTGGCAGGCTAAGATTAATTGGTGAAAATGCACCA
GAACATGGAGTTGTTGTTCCCATTTCAGAGGACACGAGTAGTGTTACTCCAGTATTCCCC
ATAAAATTAATCTCTCAACCCGATCATAAAAAGAATGATGAAAAAACAGAGGTGCCATGG
GTTTTGGAGTATACTTCATGCCTCTTGTTTCTAGCTGTATTTGGAATATTGGGGGTTTTG
TTGAGGTATGGTCTCCAAAAATTATTCGGACCAGGAATAGTTGGTGCCACAAGTGATCAT
AGTTATATGTATCTGGACCTGCCTTCTAACATGGTCGGTTCGTTCTTGATGGGTTGGTTT
GGTGTGGTCTTTAAAGAGGACATTTCCAGAATTTCAAGTCAATTAGCAATTGGATTGTCA
ACTGGTTTTCTAGGAAGCCTTACTACTTTCAGTGGTTGGAACCAAAAGATGCTCGAGCTT
AGTGTTGAAGGGCAGTGGGTTTTTGTAGTTCTTGGCTATCTTCTAGGTTTATTTCTTGTT
GCCTACTCAATCATATTTGGAATTGAGACTGCGAAAGGTGTCAATTGGCTCTACAAAAGA
ACCAATATGAATTCATCCAACTCGGGCACTGACTGCCATTGGAGAGTAGATAGCTGCAAG
CACCATTTAATTGTTATACTCTTTCTACTACTCATTCTAGCATCGCTCTGGGGTATGAGC
ATAGGACTGGAGGTAAATGAATTCAGCAGCGGGAGCCCAAAAGCACAGTTGTGGCTGGCC
TGCATAGTTGGTCCATTTGGTGTGTGGATCAGGTGGTTCTTAGCACGACTAAATGGACGT
GGTTTAGGAAAATCAGGCCTGCTCAAATGGGTGCCCTTTGGGACTTTGATTGCCAATGTA
TCTGCAGCTTGTATCATGGCAGCCCTTGCGACCTTAAAGAAAGCAGTCAACACAGAGACG
TGTGATACAGTTGCTTCTGGTATCCAGTTTGGTCTATTGGGTTGTTTAAGTACAGTTTCC
ACTTTCATTGCTGAATTTCATGCAATGAGAGGAAGCAAGTATCCATGGAGGGCGTATGTG
TACGCTTTGTGTACAACGCTTATATCATTCATCTTGGGGACACTTATATACTCTCTGCCT
GTTTGGGTTGAAAATTTCAACTAG