Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031475
CDS Infomation

pacid=37464550 polypeptide=PGSC0003DMP400021345 locus=PGSC0003DMG400012071 ID=PGSC0003DMT400031475.v4.03 annot-version=v4.03
Sequence

ATGGCTATGATGGTTGATGAAACCATCTCAGATTTTGATTGTTATGGTAGTTTAAGCACA
CCCACTACAACTATCACTACAACAACAACCTCTTCTTCTTCCGAAGATGATCATGGTTGT
ACATGGAATGACTGGTCGCCGGTTTTCGATTGGGATGCGTTTTCCGGTGGCGATAATTTC
CAAGATCTAATTGAATCTATGATCCAGGGATCGGGTAATTGCTTTCACAACTCCGAAGAG
GATTCTGCTGAGATTATGGAGGAAGAAGAAGAAGAAGAATCAGGAGACTCTAATAACAAC
CAATCGGAAGATATTAACGGGCTGAAGCTTGTTCACCTCCTCATGGCGGCAGCGGAGGCG
TTAACCGGCGTGAATAAAAGCCGTGAGTTGGCTCGAGTGATATTGGTTCGGCTCAAGGAA
TTGGCGTCCCCAAACGGCGCTACCAATATGGAGAGATTGGCCGCGCATTTCACTGACGCC
TTGCAGGCGTTGCTCGACGGCGCTGCTTCCGGTACGTTACACGCTAAGCTCATGTTTTCC
CCAAATTACAAAGACGAACACCATCAGGGAGATGTTCTAGCAGCTTTTCAGCTATTGCAG
GACATGTCTCCTTTTGTCAAATTTGGGCATTTTACAGCAAATCAAGCTATATTCGAATCG
GTAACCCATGATCGAAGAGTACATATTGTGGATTACGATATAATGGAAGGAATTCAATGG
GCATCGTTAATGCAAGCATTGGTGTCCAGAAAAGATGGCCCCCCAACTCCCCACCTTCGG
ATCACAGCATTGTCAAGGAGCGGCAGCGGCCGTCGGTCATTCGGAACGGTCCAAGAGACC
GGCCGTCGGTTAACGGCTTTCGCTACATCTATCGGTCAGCCATTTTCATTTCATCACTGC
AGATTGGACTCGGACGAAATATTTAAGCCAACAAATCTCAAGTTAGTTAGAGGCGAAGCT
CTAATTATTAATTGCATGCTTCATTTGCCTCATTTTAGCTATCGGGCCTCGGATTCAGTT
GCTTCGTTCCTATCTGGATCTAAGACACTGAATCCGAGACTCGTGACCCTAGTCGAAGAG
GAACTAAGGCCAATAGGAGACGAAGAAGGGTTCATGGGTCGGTTCATGGATACTTTACAC
CACTACTCAGCACTCTATGATTCGCTTGAGGCAGGATTCCCTTTGCAAAGCCGAGCTCGG
GCATTGGTGGAGCGGGTATTCCTCGGGCCTCGAATAACTGGGTCGTTGGCCCGAATCTAC
CGGGCCCGAGGAGAGGAAGAAAGGTGCTCATGGGGGGAGTGGTTGAGTGGAGTGGGGTTC
TGTGAGAGTAATATAAGCTTTGCAAATCATTGTCAAGCAAAATTGTTGTTGGGGCTATTC
AATGATGGGTATAGGGTGGAGGAAATTGGGACCAATAAGTTGGTTTTAGGATGGAAGTCC
CGGCGCCTACTTTCTGCTTCTATTTGGACCACAATGGATATTGACTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021345
PEP Infomation

pacid=37464550 transcript=PGSC0003DMT400031475 locus=PGSC0003DMG400012071 ID=PGSC0003DMT400031475.v4.03 annot-version=v4.03
Sequence

MAMMVDETISDFDCYGSLSTPTTTITTTTTSSSSEDDHGCTWNDWSPVFDWDAFSGGDNF
QDLIESMIQGSGNCFHNSEEDSAEIMEEEEEEESGDSNNNQSEDINGLKLVHLLMAAAEA
LTGVNKSRELARVILVRLKELASPNGATNMERLAAHFTDALQALLDGAASGTLHAKLMFS
PNYKDEHHQGDVLAAFQLLQDMSPFVKFGHFTANQAIFESVTHDRRVHIVDYDIMEGIQW
ASLMQALVSRKDGPPTPHLRITALSRSGSGRRSFGTVQETGRRLTAFATSIGQPFSFHHC
RLDSDEIFKPTNLKLVRGEALIINCMLHLPHFSYRASDSVASFLSGSKTLNPRLVTLVEE
ELRPIGDEEGFMGRFMDTLHHYSALYDSLEAGFPLQSRARALVERVFLGPRITGSLARIY
RARGEEERCSWGEWLSGVGFCESNISFANHCQAKLLLGLFNDGYRVEEIGTNKLVLGWKS
RRLLSASIWTTMDIDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400031475
Transcript Infomation

pacid=37464550 locus=PGSC0003DMG400012071 ID=PGSC0003DMT400031475.v4.03 annot-version=v4.03
Sequence

ATGGCTATGATGGTTGATGAAACCATCTCAGATTTTGATTGTTATGGTAGTTTAAGCACA
CCCACTACAACTATCACTACAACAACAACCTCTTCTTCTTCCGAAGATGATCATGGTTGT
ACATGGAATGACTGGTCGCCGGTTTTCGATTGGGATGCGTTTTCCGGTGGCGATAATTTC
CAAGATCTAATTGAATCTATGATCCAGGGATCGGGTAATTGCTTTCACAACTCCGAAGAG
GATTCTGCTGAGATTATGGAGGAAGAAGAAGAAGAAGAATCAGGAGACTCTAATAACAAC
CAATCGGAAGATATTAACGGGCTGAAGCTTGTTCACCTCCTCATGGCGGCAGCGGAGGCG
TTAACCGGCGTGAATAAAAGCCGTGAGTTGGCTCGAGTGATATTGGTTCGGCTCAAGGAA
TTGGCGTCCCCAAACGGCGCTACCAATATGGAGAGATTGGCCGCGCATTTCACTGACGCC
TTGCAGGCGTTGCTCGACGGCGCTGCTTCCGGTACGTTACACGCTAAGCTCATGTTTTCC
CCAAATTACAAAGACGAACACCATCAGGGAGATGTTCTAGCAGCTTTTCAGCTATTGCAG
GACATGTCTCCTTTTGTCAAATTTGGGCATTTTACAGCAAATCAAGCTATATTCGAATCG
GTAACCCATGATCGAAGAGTACATATTGTGGATTACGATATAATGGAAGGAATTCAATGG
GCATCGTTAATGCAAGCATTGGTGTCCAGAAAAGATGGCCCCCCAACTCCCCACCTTCGG
ATCACAGCATTGTCAAGGAGCGGCAGCGGCCGTCGGTCATTCGGAACGGTCCAAGAGACC
GGCCGTCGGTTAACGGCTTTCGCTACATCTATCGGTCAGCCATTTTCATTTCATCACTGC
AGATTGGACTCGGACGAAATATTTAAGCCAACAAATCTCAAGTTAGTTAGAGGCGAAGCT
CTAATTATTAATTGCATGCTTCATTTGCCTCATTTTAGCTATCGGGCCTCGGATTCAGTT
GCTTCGTTCCTATCTGGATCTAAGACACTGAATCCGAGACTCGTGACCCTAGTCGAAGAG
GAACTAAGGCCAATAGGAGACGAAGAAGGGTTCATGGGTCGGTTCATGGATACTTTACAC
CACTACTCAGCACTCTATGATTCGCTTGAGGCAGGATTCCCTTTGCAAAGCCGAGCTCGG
GCATTGGTGGAGCGGGTATTCCTCGGGCCTCGAATAACTGGGTCGTTGGCCCGAATCTAC
CGGGCCCGAGGAGAGGAAGAAAGGTGCTCATGGGGGGAGTGGTTGAGTGGAGTGGGGTTC
TGTGAGAGTAATATAAGCTTTGCAAATCATTGTCAAGCAAAATTGTTGTTGGGGCTATTC
AATGATGGGTATAGGGTGGAGGAAATTGGGACCAATAAGTTGGTTTTAGGATGGAAGTCC
CGGCGCCTACTTTCTGCTTCTATTTGGACCACAATGGATATTGACTTGTAA