Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031466
CDS Infomation

pacid=37468773 polypeptide=PGSC0003DMP400021340 locus=PGSC0003DMG400012067 ID=PGSC0003DMT400031466.v4.03 annot-version=v4.03
Sequence

ATGGACAGGCGGCTGAATGAAGCAGTTTTGAGGGGAGATGTTGAAGCCATTCAAAAACTG
ATTGAAGAAGATTCAAACATAGTAAAACAAAGCATTGAGGGTTCATTACAACAAACCATA
TTGCATCTAGCAGCTAGACTTGGTCATGTTGAATTGGTGAGGGAGATTGTGAAGTTGTTC
CCGGAGATGGTGTCCGCGGAGAATCGGGATCAGGAGACGCCCTTACATGAAGCATGTAGA
GAAGGGAGAGTAGAAATTGTGAGAATTCTGGTTGAGAATGATCCATCGATTGCTTATAAG
ACAAATTTGTGGGATAAGAGTGTGCTTTATGTAGCATGTGAGAGAGGGAGGATTGAAGTG
GTTAAGTATTTGTTACATAATAATAATATGCACATGTTGTTGATGCTTGAAGTTGATATG
TCCACTACTTCACTTCATGCTGCAGCTTCATCAGGCCATACAGATATAACAAGAGAATTG
CTAAAGCTAGACATGGACCTTACTGGTTTACAAGATAATGAAGGCAGAACTCCACTTCAT
TGGGCAGTCATTAAAGGAAGAGTGAACATTATAGCTGAGATACTCTCAGTGAGTCTTGAA
TCTTCTGAAATGACAACAAAACATGGTGAGACTATTCTTCATTTGGCTGTCAAGAACAAT
CACTTTGAAGTACTCAAGTTCTTGATGGAGACTCTTGATGTTTCAAATCTCATGAATTAT
CAAGATACTGATGGAAACACCATTCTACATTTGGCTACTGTTAGGAAACTCACCACTATG
ATTATTTATCTACTTAAGCTTGGTGTTGAAGTAAATGCTTTGAATCAAAAAGGATATACA
TCATTAGATGTAGTTGAAGCAGATGCAAGTAACTCTGGTGCTCTTGCAATCATCCCTGCA
TTACAAGAAGCTGGTGCCAAAAGATGTGACCAATTACCACCAAAATTTTCAAGACATCCA
ACAGGTTTTCACTCTCCGTCCTCATCATCTCAACATTCTTATTATAGTAATCATCATCAT
CAAAGGAAGCATAATTATAGCGGTACTAGGACAAAAAAAATCAAGCTCCAAAGTGAAGGT
CTAAGGAATGCAAGAAAAACGATAACAATTGTTGCAGTACTAATAGCAACTGTGACATTT
GCTGCTGGTGTTAATCCTCCTGGTGGATTTAATGAAGAAAATGGAAAAGCATTATTGGGT
AAAAAAACCGCGTTTAAGGTGTTTTTGGTATGTAACATTGTGGCACTTTTCCTTTCCCTT
GGAATTGTTAATGTCCTTGTTAGTGTTATCCCATTCAAGAGAAGAACAATGATGAAATTA
ATGGTGGCAACACATAAAGTAATGTGGATTTCAACATTATTTATGGCATCAGCTTATATT
GCTGCAATATGGTCAATATTGCCACAAGGAAAGGGGGATCATTGGGTGCTAAGTGAAGTT
GTGATCATAGGAGGAGGGTGCACTATGGCTGTGTTTCTAAGTTTGGGGATTTTGTTAGTG
AGACAATGGAAAAGGAAGAGTGAATGGAGAAAAAAAAGAGAGAATCATAAGAAGATGAAA
GAGGGAAGTCCTAAGAGTAATACAAGTACAGTTCAAGAAATGAAAGTGGTGAAGAAAGAA
AGTCATGAAGGTAGTACCAACTCAGATGTTGATAGCTCAGATCATGGTTATCATTTGTTT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400021340
PEP Infomation

pacid=37468773 transcript=PGSC0003DMT400031466 locus=PGSC0003DMG400012067 ID=PGSC0003DMT400031466.v4.03 annot-version=v4.03
Sequence

MDRRLNEAVLRGDVEAIQKLIEEDSNIVKQSIEGSLQQTILHLAARLGHVELVREIVKLF
PEMVSAENRDQETPLHEACREGRVEIVRILVENDPSIAYKTNLWDKSVLYVACERGRIEV
VKYLLHNNNMHMLLMLEVDMSTTSLHAAASSGHTDITRELLKLDMDLTGLQDNEGRTPLH
WAVIKGRVNIIAEILSVSLESSEMTTKHGETILHLAVKNNHFEVLKFLMETLDVSNLMNY
QDTDGNTILHLATVRKLTTMIIYLLKLGVEVNALNQKGYTSLDVVEADASNSGALAIIPA
LQEAGAKRCDQLPPKFSRHPTGFHSPSSSSQHSYYSNHHHQRKHNYSGTRTKKIKLQSEG
LRNARKTITIVAVLIATVTFAAGVNPPGGFNEENGKALLGKKTAFKVFLVCNIVALFLSL
GIVNVLVSVIPFKRRTMMKLMVATHKVMWISTLFMASAYIAAIWSILPQGKGDHWVLSEV
VIIGGGCTMAVFLSLGILLVRQWKRKSEWRKKRENHKKMKEGSPKSNTSTVQEMKVVKKE
SHEGSTNSDVDSSDHGYHLF*

Transcript Sequence

Transcript ID

PGSC0003DMT400031466
Transcript Infomation

pacid=37468773 locus=PGSC0003DMG400012067 ID=PGSC0003DMT400031466.v4.03 annot-version=v4.03
Sequence

ATGGACAGGCGGCTGAATGAAGCAGTTTTGAGGGGAGATGTTGAAGCCATTCAAAAACTG
ATTGAAGAAGATTCAAACATAGTAAAACAAAGCATTGAGGGTTCATTACAACAAACCATA
TTGCATCTAGCAGCTAGACTTGGTCATGTTGAATTGGTGAGGGAGATTGTGAAGTTGTTC
CCGGAGATGGTGTCCGCGGAGAATCGGGATCAGGAGACGCCCTTACATGAAGCATGTAGA
GAAGGGAGAGTAGAAATTGTGAGAATTCTGGTTGAGAATGATCCATCGATTGCTTATAAG
ACAAATTTGTGGGATAAGAGTGTGCTTTATGTAGCATGTGAGAGAGGGAGGATTGAAGTG
GTTAAGTATTTGTTACATAATAATAATATGCACATGTTGTTGATGCTTGAAGTTGATATG
TCCACTACTTCACTTCATGCTGCAGCTTCATCAGGCCATACAGATATAACAAGAGAATTG
CTAAAGCTAGACATGGACCTTACTGGTTTACAAGATAATGAAGGCAGAACTCCACTTCAT
TGGGCAGTCATTAAAGGAAGAGTGAACATTATAGCTGAGATACTCTCAGTGAGTCTTGAA
TCTTCTGAAATGACAACAAAACATGGTGAGACTATTCTTCATTTGGCTGTCAAGAACAAT
CACTTTGAAGTACTCAAGTTCTTGATGGAGACTCTTGATGTTTCAAATCTCATGAATTAT
CAAGATACTGATGGAAACACCATTCTACATTTGGCTACTGTTAGGAAACTCACCACTATG
ATTATTTATCTACTTAAGCTTGGTGTTGAAGTAAATGCTTTGAATCAAAAAGGATATACA
TCATTAGATGTAGTTGAAGCAGATGCAAGTAACTCTGGTGCTCTTGCAATCATCCCTGCA
TTACAAGAAGCTGGTGCCAAAAGATGTGACCAATTACCACCAAAATTTTCAAGACATCCA
ACAGGTTTTCACTCTCCGTCCTCATCATCTCAACATTCTTATTATAGTAATCATCATCAT
CAAAGGAAGCATAATTATAGCGGTACTAGGACAAAAAAAATCAAGCTCCAAAGTGAAGGT
CTAAGGAATGCAAGAAAAACGATAACAATTGTTGCAGTACTAATAGCAACTGTGACATTT
GCTGCTGGTGTTAATCCTCCTGGTGGATTTAATGAAGAAAATGGAAAAGCATTATTGGGT
AAAAAAACCGCGTTTAAGGTGTTTTTGGTATGTAACATTGTGGCACTTTTCCTTTCCCTT
GGAATTGTTAATGTCCTTGTTAGTGTTATCCCATTCAAGAGAAGAACAATGATGAAATTA
ATGGTGGCAACACATAAAGTAATGTGGATTTCAACATTATTTATGGCATCAGCTTATATT
GCTGCAATATGGTCAATATTGCCACAAGGAAAGGGGGATCATTGGGTGCTAAGTGAAGTT
GTGATCATAGGAGGAGGGTGCACTATGGCTGTGTTTCTAAGTTTGGGGATTTTGTTAGTG
AGACAATGGAAAAGGAAGAGTGAATGGAGAAAAAAAAGAGAGAATCATAAGAAGATGAAA
GAGGGAAGTCCTAAGAGTAATACAAGTACAGTTCAAGAAATGAAAGTGGTGAAGAAAGAA
AGTCATGAAGGTAGTACCAACTCAGATGTTGATAGCTCAGATCATGGTTATCATTTGTTT
TAA