Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031375
CDS Infomation

pacid=37462099 polypeptide=PGSC0003DMP400021274 locus=PGSC0003DMG400012026 ID=PGSC0003DMT400031375.v4.03 annot-version=v4.03
Sequence

ATGGGGTTGCCTCAAGTGCCCTCCAGCAATATTGCTGAGGAAGTGGCCACATCATTGAGC
ACATTTGTTCAAACTCCTGCTAGATTTGCTGGCATGAGTAGTTGTGATATGAGTGGAATG
CACATAAGTTGCCTTAGCAATCGGACATCAGCGGATTTTTCATTCGTCTCGTCTAGGGAT
GTTTCCAGGGATGCTGATATTCTTAGTCTACATAAAGATGGTATGACAAGCATGCATAAA
TTGAGGATTGATTCTGCAGAAAATCATGGCTTCTTCACTCATAATGGTGGAAGGACTACC
CAGAGTCCTGCATCAAGGATTGTTGGGTTCGAATCAAAAAGTGCAATAAAAAGCCATGCT
AGTTTGTTTGAAGCAAATCCATTGGATAGCGTCGATTCATCTACTGTGGTTCGGGACATT
GACAGAATGAGTGAGACTACAAGTTCATTAGTTAGGAAACGCTTGTTGTCTCCTTTGAAT
GGTATGGTTCTTCCAGATAAATTTGCTGGTGAATCTCTGGATATTGGTGGTAGTACTGTT
CGGAGTAATTCCAACTTCACTCGTGATAAATATGGTGCTTCCTCACAAGAACATAAAAAG
GCTCATATAGGCAACACAGACAACTTTAGTAATGAAAATTGGTTCATGCCATCTTTCCCT
AGGGGGAATTGTTTGCCAACTGAAAACTGTGTAGAAGTCTCCTCTTTTGTCATAGATGGT
CCTTTGTTCAATGACGGGGGACCTGAATCTGAGATCCCTTTTACTCCTCCATCCCCTGGG
TTAAACTTTTATGCACATATGATAAAAACACAGTTGAAAGATGGGATAATGGACATGCCC
GGAGAATATACATTCTCGCCACCTCCGTCTCTTTCTCCTCTTGGACCAAAATCTCATATA
AGGTTGGGACGCGCAGAAAGGTTTAGGCATTCCTGGGAGGATCACGATGATAACTACTTA
ACTTTGAAGGATGTGGAACAGTCACTTGATCGAAGGCTTTCAGGCATTTTATCTCCCCGG
AAGGAAGAGGATCGCAAAACAGGAAGTGATCTTTTTCAAGATATTGAAGTTTTTGAGATG
AACTTTGAACGTTCCACACCTGAAAGTATAAGTGTCACGAGGCGGTCCAAGACACAAAAT
TCAGTTCCTACAAATCAATGTGCAAGATTTGGTAGAAGTCTTAGTGGACTGTCTGTCAAA
AGGTCCTTAGTCGGTTCATTCGAGGAGTCACTATTATCTGGTCGTTTGACATCCAGTGTA
GTCAGCCAGAGAATTGATGGTTTTCTTGCCGTCCTTAGTATCACTGGTGGAAATTTCTCG
CCACATCCTCAGAAACTTCCATTTGCTGTAACTAGCGTAGATGGTGATAACTTCTTGCTT
TATTACTCATCAATAGATCTTGGAAGACCAGGTAGTGATGGTAAAGGCTCACAAATCAAG
AACTCTAGCACTAATAATTTACAAACAAACAAGGGCCGCCTACGTATACCGATGAAAGGG
CGCATACAACTGGTTCTAAGCAATCCAGAGAGGACACCTATCCACACATTCTTATGTAGC
TATGATTTGAGTGACATGCCAGCTGGTACTAAGACATTTTTACGTCAAAAGATAAATTTG
TTTATGGATAAAGCTGGAAACAAGAGTTTAGACAGAAAGATGGATAGTGAACCACCGTCA
GTTATTAGTGTTGAGGAATCTATGCTGCATGAAAGCCATTCTACCAAATCTTATGGTACT
GGCAAGGCAGGCCATTGTGGAACCAAACCTGCAAATAGCACTTCAAAGGTGAATGAGAGT
ACTGCTAATTCTAGTGTTCTTCGTTACGCTCTACATCTCTGGTTCTTGTGTCCCTACCCG
AAGAAGAGCACAAAATCAGGTATTCAGTGCAAAGATGATCAGGAGAGACGATTCTACTTG
TATAATGATATGAGAGTAGTTTTCCCTCAACGACATTCAGATGCTGATGAAGGCAAGGTA
TGTCTAATATGGTATATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400021274
PEP Infomation

pacid=37462099 transcript=PGSC0003DMT400031375 locus=PGSC0003DMG400012026 ID=PGSC0003DMT400031375.v4.03 annot-version=v4.03
Sequence

MGLPQVPSSNIAEEVATSLSTFVQTPARFAGMSSCDMSGMHISCLSNRTSADFSFVSSRD
VSRDADILSLHKDGMTSMHKLRIDSAENHGFFTHNGGRTTQSPASRIVGFESKSAIKSHA
SLFEANPLDSVDSSTVVRDIDRMSETTSSLVRKRLLSPLNGMVLPDKFAGESLDIGGSTV
RSNSNFTRDKYGASSQEHKKAHIGNTDNFSNENWFMPSFPRGNCLPTENCVEVSSFVIDG
PLFNDGGPESEIPFTPPSPGLNFYAHMIKTQLKDGIMDMPGEYTFSPPPSLSPLGPKSHI
RLGRAERFRHSWEDHDDNYLTLKDVEQSLDRRLSGILSPRKEEDRKTGSDLFQDIEVFEM
NFERSTPESISVTRRSKTQNSVPTNQCARFGRSLSGLSVKRSLVGSFEESLLSGRLTSSV
VSQRIDGFLAVLSITGGNFSPHPQKLPFAVTSVDGDNFLLYYSSIDLGRPGSDGKGSQIK
NSSTNNLQTNKGRLRIPMKGRIQLVLSNPERTPIHTFLCSYDLSDMPAGTKTFLRQKINL
FMDKAGNKSLDRKMDSEPPSVISVEESMLHESHSTKSYGTGKAGHCGTKPANSTSKVNES
TANSSVLRYALHLWFLCPYPKKSTKSGIQCKDDQERRFYLYNDMRVVFPQRHSDADEGKV
CLIWYI*

Transcript Sequence

Transcript ID

PGSC0003DMT400031375
Transcript Infomation

pacid=37462099 locus=PGSC0003DMG400012026 ID=PGSC0003DMT400031375.v4.03 annot-version=v4.03
Sequence

ATGGGGTTGCCTCAAGTGCCCTCCAGCAATATTGCTGAGGAAGTGGCCACATCATTGAGC
ACATTTGTTCAAACTCCTGCTAGATTTGCTGGCATGAGTAGTTGTGATATGAGTGGAATG
CACATAAGTTGCCTTAGCAATCGGACATCAGCGGATTTTTCATTCGTCTCGTCTAGGGAT
GTTTCCAGGGATGCTGATATTCTTAGTCTACATAAAGATGGTATGACAAGCATGCATAAA
TTGAGGATTGATTCTGCAGAAAATCATGGCTTCTTCACTCATAATGGTGGAAGGACTACC
CAGAGTCCTGCATCAAGGATTGTTGGGTTCGAATCAAAAAGTGCAATAAAAAGCCATGCT
AGTTTGTTTGAAGCAAATCCATTGGATAGCGTCGATTCATCTACTGTGGTTCGGGACATT
GACAGAATGAGTGAGACTACAAGTTCATTAGTTAGGAAACGCTTGTTGTCTCCTTTGAAT
GGTATGGTTCTTCCAGATAAATTTGCTGGTGAATCTCTGGATATTGGTGGTAGTACTGTT
CGGAGTAATTCCAACTTCACTCGTGATAAATATGGTGCTTCCTCACAAGAACATAAAAAG
GCTCATATAGGCAACACAGACAACTTTAGTAATGAAAATTGGTTCATGCCATCTTTCCCT
AGGGGGAATTGTTTGCCAACTGAAAACTGTGTAGAAGTCTCCTCTTTTGTCATAGATGGT
CCTTTGTTCAATGACGGGGGACCTGAATCTGAGATCCCTTTTACTCCTCCATCCCCTGGG
TTAAACTTTTATGCACATATGATAAAAACACAGTTGAAAGATGGGATAATGGACATGCCC
GGAGAATATACATTCTCGCCACCTCCGTCTCTTTCTCCTCTTGGACCAAAATCTCATATA
AGGTTGGGACGCGCAGAAAGGTTTAGGCATTCCTGGGAGGATCACGATGATAACTACTTA
ACTTTGAAGGATGTGGAACAGTCACTTGATCGAAGGCTTTCAGGCATTTTATCTCCCCGG
AAGGAAGAGGATCGCAAAACAGGAAGTGATCTTTTTCAAGATATTGAAGTTTTTGAGATG
AACTTTGAACGTTCCACACCTGAAAGTATAAGTGTCACGAGGCGGTCCAAGACACAAAAT
TCAGTTCCTACAAATCAATGTGCAAGATTTGGTAGAAGTCTTAGTGGACTGTCTGTCAAA
AGGTCCTTAGTCGGTTCATTCGAGGAGTCACTATTATCTGGTCGTTTGACATCCAGTGTA
GTCAGCCAGAGAATTGATGGTTTTCTTGCCGTCCTTAGTATCACTGGTGGAAATTTCTCG
CCACATCCTCAGAAACTTCCATTTGCTGTAACTAGCGTAGATGGTGATAACTTCTTGCTT
TATTACTCATCAATAGATCTTGGAAGACCAGGTAGTGATGGTAAAGGCTCACAAATCAAG
AACTCTAGCACTAATAATTTACAAACAAACAAGGGCCGCCTACGTATACCGATGAAAGGG
CGCATACAACTGGTTCTAAGCAATCCAGAGAGGACACCTATCCACACATTCTTATGTAGC
TATGATTTGAGTGACATGCCAGCTGGTACTAAGACATTTTTACGTCAAAAGATAAATTTG
TTTATGGATAAAGCTGGAAACAAGAGTTTAGACAGAAAGATGGATAGTGAACCACCGTCA
GTTATTAGTGTTGAGGAATCTATGCTGCATGAAAGCCATTCTACCAAATCTTATGGTACT
GGCAAGGCAGGCCATTGTGGAACCAAACCTGCAAATAGCACTTCAAAGGTGAATGAGAGT
ACTGCTAATTCTAGTGTTCTTCGTTACGCTCTACATCTCTGGTTCTTGTGTCCCTACCCG
AAGAAGAGCACAAAATCAGGTATTCAGTGCAAAGATGATCAGGAGAGACGATTCTACTTG
TATAATGATATGAGAGTAGTTTTCCCTCAACGACATTCAGATGCTGATGAAGGCAAGGTA
TGTCTAATATGGTATATATGA