Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031364
CDS Infomation

pacid=37459317 polypeptide=PGSC0003DMP400021266 locus=PGSC0003DMG400012021 ID=PGSC0003DMT400031364.v4.03 annot-version=v4.03
Sequence

ATGAAAGTACCTGAAAACGATCCGACTAACCCCATTCACTCCAATTCCCTACTCCTTCAA
TCTCTTCTTGATTCTATTCCCCACACCCAAAGCTTCAAAGGCAAATGGTCTTTAATCAGA
ACCAAACTATCTATACTCCAGTCTCACCTTTCTGACCTTTCCACTGCCCCCATTAACGCT
TTCCACAATCCCCTTTACAATGACCTACTTCTTGCGCTTTCTGTTACTCTGAAGGACGCT
TTTTCTCTCTCTTCCATTTGCCACAGTGCGAACCCGCCTGAAGGTAAACTCAAAACCCAG
AATGATATCGATTCAGTTTCTGCAAAAGTTGATAACCATGTAAGGGATTTGGAGGTTCTT
GTTAAGAATGGGGTTCTTCAAGAAAACGGTGCTGTTTCGACGAATATTACATCGAAGAGG
GAGACTATACGGGCGGAATCGAGGAATCTGATAACTCGGCTTCAGATCGGGACGACTGAG
TCGAAGAACTCGGTGTTGGATTCGTTGCTTGGGTTGTTACAGGAAGATGACAAGAATGTA
TTGATTGCAGTAGCTCAAGGGGTTGTTCCGGTGCTTGTGCGGTTACTCGATTCCAGCTCT
TCGCCGGAGATCAAGGAGAAAACAGTCATCGCCATTGCTAAAATCTCAACTGTTGATTCA
AGCAAGCATGTTTTGATCGCCGAAGGTTTGTGTATTCTCAACAATCTTTTAAGGGTTCTT
GAATCTGGGAGTGTTTTGGGGAAGGAAAATTCATGTATAGCTTTGCAAGCATTGGGTCAT
ACAAAGGAGAATGCAAGAGCAATTGGGTCAAGAGGAGGAATTTCATCATTGTTAGAAATT
TGCCAAACGGGAACACCCAATTCTCAAGCTATGGCAGCTGCAGTGCTAAAAAATTTAGCT
GTTTTCGAAGAAATTAGAGAGAATTTCCTTGAAGAAGACGCAATTATGATCCTTTTAAGG
TTATCCAATTCTGGGACAGCATTCGCCCAAGAAAATGCAATTTCTTGCTTGTCTAATTTG
ATTTCTGGAGATACCAATATGAAACTCTTGGTAGCCAGGGAAGGTGGAATCGAAAGCATC
AAGAATTTCTGGGATTCTGCTCCTTCAGTGCAGAGTCTAGAAGCCCTTGTTCTTATGCTA
AGAACGTTAGCTTCTTGCCCATCAATAGCTGATGTAATTGTGGACAATGAATTTTTACCT
CGAATTGTCGGTGTTCTGAATTGTGGGGTTTTAGGTGTTAGGATTGCTGCAGCAAATGCA
ATTTATGATTTGGGATACAACACAAGAACCCGAAAAGAATTAGGCGAAATCGGGTGCATT
CCACCACTGGTGAGACTCACAGAAGGTAAATCCGTGGAAGAGAAAGAAGCAGCTGCAAGT
GCATTGTCAAGTTTGATGATTTATGCCGGAAATAGAAAGATTTTCAGGAAGGAAGAAAGG
GGTATTGTGAATGCAGTTCAACTTTTAGATCCTGTGGTACAAAACTTAGACAAAAGACAC
CCTGTTTCGTTATTGGCTTCGCTTGTTTACTCCAAGAATTGCCGGAAACAAATGGTGGCT
TCAGGGGCTTGTGTGCATTTACAGAAGCTAGCTGAGATGGAGATTGAAGGAGCTAAAAAG
CTCTTGGATTGTCTTGGTAGAGGCAAACTATGGGGAGTTTTCACCAGACATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400021266
PEP Infomation

pacid=37459317 transcript=PGSC0003DMT400031364 locus=PGSC0003DMG400012021 ID=PGSC0003DMT400031364.v4.03 annot-version=v4.03
Sequence

MKVPENDPTNPIHSNSLLLQSLLDSIPHTQSFKGKWSLIRTKLSILQSHLSDLSTAPINA
FHNPLYNDLLLALSVTLKDAFSLSSICHSANPPEGKLKTQNDIDSVSAKVDNHVRDLEVL
VKNGVLQENGAVSTNITSKRETIRAESRNLITRLQIGTTESKNSVLDSLLGLLQEDDKNV
LIAVAQGVVPVLVRLLDSSSSPEIKEKTVIAIAKISTVDSSKHVLIAEGLCILNNLLRVL
ESGSVLGKENSCIALQALGHTKENARAIGSRGGISSLLEICQTGTPNSQAMAAAVLKNLA
VFEEIRENFLEEDAIMILLRLSNSGTAFAQENAISCLSNLISGDTNMKLLVAREGGIESI
KNFWDSAPSVQSLEALVLMLRTLASCPSIADVIVDNEFLPRIVGVLNCGVLGVRIAAANA
IYDLGYNTRTRKELGEIGCIPPLVRLTEGKSVEEKEAAASALSSLMIYAGNRKIFRKEER
GIVNAVQLLDPVVQNLDKRHPVSLLASLVYSKNCRKQMVASGACVHLQKLAEMEIEGAKK
LLDCLGRGKLWGVFTRH*

Transcript Sequence

Transcript ID

PGSC0003DMT400031364
Transcript Infomation

pacid=37459317 locus=PGSC0003DMG400012021 ID=PGSC0003DMT400031364.v4.03 annot-version=v4.03
Sequence

ATGAAAGTACCTGAAAACGATCCGACTAACCCCATTCACTCCAATTCCCTACTCCTTCAA
TCTCTTCTTGATTCTATTCCCCACACCCAAAGCTTCAAAGGCAAATGGTCTTTAATCAGA
ACCAAACTATCTATACTCCAGTCTCACCTTTCTGACCTTTCCACTGCCCCCATTAACGCT
TTCCACAATCCCCTTTACAATGACCTACTTCTTGCGCTTTCTGTTACTCTGAAGGACGCT
TTTTCTCTCTCTTCCATTTGCCACAGTGCGAACCCGCCTGAAGGTAAACTCAAAACCCAG
AATGATATCGATTCAGTTTCTGCAAAAGTTGATAACCATGTAAGGGATTTGGAGGTTCTT
GTTAAGAATGGGGTTCTTCAAGAAAACGGTGCTGTTTCGACGAATATTACATCGAAGAGG
GAGACTATACGGGCGGAATCGAGGAATCTGATAACTCGGCTTCAGATCGGGACGACTGAG
TCGAAGAACTCGGTGTTGGATTCGTTGCTTGGGTTGTTACAGGAAGATGACAAGAATGTA
TTGATTGCAGTAGCTCAAGGGGTTGTTCCGGTGCTTGTGCGGTTACTCGATTCCAGCTCT
TCGCCGGAGATCAAGGAGAAAACAGTCATCGCCATTGCTAAAATCTCAACTGTTGATTCA
AGCAAGCATGTTTTGATCGCCGAAGGTTTGTGTATTCTCAACAATCTTTTAAGGGTTCTT
GAATCTGGGAGTGTTTTGGGGAAGGAAAATTCATGTATAGCTTTGCAAGCATTGGGTCAT
ACAAAGGAGAATGCAAGAGCAATTGGGTCAAGAGGAGGAATTTCATCATTGTTAGAAATT
TGCCAAACGGGAACACCCAATTCTCAAGCTATGGCAGCTGCAGTGCTAAAAAATTTAGCT
GTTTTCGAAGAAATTAGAGAGAATTTCCTTGAAGAAGACGCAATTATGATCCTTTTAAGG
TTATCCAATTCTGGGACAGCATTCGCCCAAGAAAATGCAATTTCTTGCTTGTCTAATTTG
ATTTCTGGAGATACCAATATGAAACTCTTGGTAGCCAGGGAAGGTGGAATCGAAAGCATC
AAGAATTTCTGGGATTCTGCTCCTTCAGTGCAGAGTCTAGAAGCCCTTGTTCTTATGCTA
AGAACGTTAGCTTCTTGCCCATCAATAGCTGATGTAATTGTGGACAATGAATTTTTACCT
CGAATTGTCGGTGTTCTGAATTGTGGGGTTTTAGGTGTTAGGATTGCTGCAGCAAATGCA
ATTTATGATTTGGGATACAACACAAGAACCCGAAAAGAATTAGGCGAAATCGGGTGCATT
CCACCACTGGTGAGACTCACAGAAGGTAAATCCGTGGAAGAGAAAGAAGCAGCTGCAAGT
GCATTGTCAAGTTTGATGATTTATGCCGGAAATAGAAAGATTTTCAGGAAGGAAGAAAGG
GGTATTGTGAATGCAGTTCAACTTTTAGATCCTGTGGTACAAAACTTAGACAAAAGACAC
CCTGTTTCGTTATTGGCTTCGCTTGTTTACTCCAAGAATTGCCGGAAACAAATGGTGGCT
TCAGGGGCTTGTGTGCATTTACAGAAGCTAGCTGAGATGGAGATTGAAGGAGCTAAAAAG
CTCTTGGATTGTCTTGGTAGAGGCAAACTATGGGGAGTTTTCACCAGACATTGA