Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031321
CDS Infomation

pacid=37453430 polypeptide=PGSC0003DMP400021243 locus=PGSC0003DMG400012003 ID=PGSC0003DMT400031321.v4.03 annot-version=v4.03
Sequence

ATGACTAACCAGGCCGAGTCATCTGACTCAAAAGGTGCGAAGAAGGATTTCTCTACCGCG
ATTTTGGAGAGGAAGAAGTCTCCTAATCGGCTTGTTGTTGATGAGGCGGTCAACGATGAT
AACTCTGTTGTTGCACTGCACCCTGCTACTATGGAGAAGCTACAGCTCTTCCGTGGAGAT
ACAATTCTCATCAAGGGAAAGAAAAGGAAGGATACAGTTGTCATTGCACTTGCCGATGAA
ACATGCGATGAGCCGAAGATTAGGATGAACAAGGTTGTCCGTTCAAATTTGAGGGTCCGT
CTTGGAGATGTTGTGTCTGTGCACCAATGCCCAGATGTTAAGTATGGGAAGCGTGTCCAC
ATACTTCCTATAGATGATACAATAGAAGGTCTCACTGGGGATTTGTTTGATGCGTTTCTG
AAACCTTACTTTTTGGAAGCATATCGTCCTTTGAGAAAAGGAGACAATTTCCTTGTTAGA
GGAGGGATGAGAAGTGTGGAATTCAAAGTCATTGAGACTGACCCAGGGGAGTATTGTGTT
GTTGCTCCAGACACTGAAATCTTTTGTGAGGGGGAGCCTGTTAAAAGGGAGGACGAGGAG
AGACTGGACGAAGTTGGCTATGATGACGTTGGTGGTGTGAGAAAACAGATGGCTCAGATT
CGTGAACTGGTGGAATTACCATTGAGGCATCCTCAACTTTTCAAATCCATTGGTGTGAAA
CCACCAAAGGGGATTTTACTTTATGGACCCCCTGGTTCTGGGAAGACCCTGATAGCCAGA
GCAGTGGCTAATGAAACAGGTGCATTTTTCTTTTGCATTAATGGACCAGAAATCATGTCC
AAATTGGCTGGTGAGAGTGAAAGCAATCTCAGGAAGGCATTCGAAGAGGCTGAGAAAAAT
GCTCCATCTATTATATTCATTGATGAGATTGATTCAATTGCTCCCAAGCGAGAGAAGACA
CATGGTGAAGTTGAGAGAAGGATTGTTTCACAGCTCCTGACTCTGATGGATGGACTGAAA
TCTCGTGCTCATGTCATAGTTATGGGAGCTACCAATCGTCCTAACAGCATTGATCCTGCT
CTCAGAAGGTTTGGTAGGTTTGATAGGGAAATTGACATTGGTGTTCCTGATGAAATTGGA
CGTCTTGAAGTTCTTCGTATTCATACCAAGAATATGAAGCTTGCAGAAGAAGTTGATTTG
GAAAGAATATCAAAAGATACACATGGTTATGTCGGTGCAGATCTTGCTGCTCTTTGCACT
GAAGCTGCACTTCAGTGCATTAGAGAGAAAATGGATGTCATTGATCTGGAAGATGATTCC
ATTGATGCTGAAATATTGAATTCAATGGCTGTCACAAATGAGCACTTCCAAACTGCTCTA
GGAACAAGCAATCCATCTGCATTGCGTGAAACAGTTGTTGAAGTGCCTAATGTCTCATGG
GAAGATATTGGAGGTCTTGAAAATGTCAAAAGAGAGCTTCAAGAGACTGTTCAATACCCA
GTGGAGCATCCGGAGAAGTTCGAGAAATTTGGTATGTCACCTTCAAAAGGTGTTCTTTTC
TATGGTCCTCCAGGATGTGGGAAAACTCTTCTTGCCAAGGCAATTGCAAATGAGTGTCAA
GCCAATTTCATTAGTATCAAAGGACCTGAGCTGCTTACCATGTGGTTTGGAGAGAGTGAG
GCCAATGTCCGTGAAATTTTTGACAAGGCTAGACAATCTGCACCCTGTGTCCTCTTCTTT
GATGAGCTCGACTCTATTGCCACTCAGAGGGGAAGCAGTAGTGGTGATGCTGGTGGAGCA
GCTGATCGGGTTCTGAACCAACTTCTGACTGAAATGGATGGCATGAATGCAAAGAAAACA
GTTTTTATTATTGGGGCCACAAACAGGCCTGATATTATTGACCCTGCACTTCTGCGACCT
GGTCGACTTGACCAGTTAATTTATATCCCACTGCCCGATGAAGACTCACGCCATCAGATT
TTCAAGGCATGTCTTAGAAAATCTCCCCTATCAAAAGATATTGATTTGAGAGCTCTTGCC
AAGTATACTCAGGGATTTAGTGGAGCTGATATCACTGAGATCTGTCAACGGGCATGCAAA
TATGCCATAAGAGAGAACATTGAGAAAGATATAGAAAAGGAAAAGAGGCGAGCAGAGAAT
CCTGATTCTATGGATGAGGATGCTGATGATGAGATATCAGAGATTAAGCCTGCTCATTTT
GAGGAGTCCATGAAGTATGCACGACGAAGTGTGAGTGATGCCGATATTCGTAAATACCAG
GCATTTGCTCAGACCTTACAGCAATCTCGAGGTTTTGGAACTGAATTTCGGTTTTCTGAG
ACCAGTGGTGGGGCTGCTGCATCTGACCCCTTCACAACTTCTAATGCTGGAGCTGATGAT
GATGACTTGTATAGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021243
PEP Infomation

pacid=37453430 transcript=PGSC0003DMT400031321 locus=PGSC0003DMG400012003 ID=PGSC0003DMT400031321.v4.03 annot-version=v4.03
Sequence

MTNQAESSDSKGAKKDFSTAILERKKSPNRLVVDEAVNDDNSVVALHPATMEKLQLFRGD
TILIKGKKRKDTVVIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGLTGDLFDAFLKPYFLEAYRPLRKGDNFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEEVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDIDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRAEN
PDSMDEDADDEISEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFSE
TSGGAAASDPFTTSNAGADDDDLYS*

Transcript Sequence

Transcript ID

PGSC0003DMT400031321
Transcript Infomation

pacid=37453430 locus=PGSC0003DMG400012003 ID=PGSC0003DMT400031321.v4.03 annot-version=v4.03
Sequence

ATGACTAACCAGGCCGAGTCATCTGACTCAAAAGGTGCGAAGAAGGATTTCTCTACCGCG
ATTTTGGAGAGGAAGAAGTCTCCTAATCGGCTTGTTGTTGATGAGGCGGTCAACGATGAT
AACTCTGTTGTTGCACTGCACCCTGCTACTATGGAGAAGCTACAGCTCTTCCGTGGAGAT
ACAATTCTCATCAAGGGAAAGAAAAGGAAGGATACAGTTGTCATTGCACTTGCCGATGAA
ACATGCGATGAGCCGAAGATTAGGATGAACAAGGTTGTCCGTTCAAATTTGAGGGTCCGT
CTTGGAGATGTTGTGTCTGTGCACCAATGCCCAGATGTTAAGTATGGGAAGCGTGTCCAC
ATACTTCCTATAGATGATACAATAGAAGGTCTCACTGGGGATTTGTTTGATGCGTTTCTG
AAACCTTACTTTTTGGAAGCATATCGTCCTTTGAGAAAAGGAGACAATTTCCTTGTTAGA
GGAGGGATGAGAAGTGTGGAATTCAAAGTCATTGAGACTGACCCAGGGGAGTATTGTGTT
GTTGCTCCAGACACTGAAATCTTTTGTGAGGGGGAGCCTGTTAAAAGGGAGGACGAGGAG
AGACTGGACGAAGTTGGCTATGATGACGTTGGTGGTGTGAGAAAACAGATGGCTCAGATT
CGTGAACTGGTGGAATTACCATTGAGGCATCCTCAACTTTTCAAATCCATTGGTGTGAAA
CCACCAAAGGGGATTTTACTTTATGGACCCCCTGGTTCTGGGAAGACCCTGATAGCCAGA
GCAGTGGCTAATGAAACAGGTGCATTTTTCTTTTGCATTAATGGACCAGAAATCATGTCC
AAATTGGCTGGTGAGAGTGAAAGCAATCTCAGGAAGGCATTCGAAGAGGCTGAGAAAAAT
GCTCCATCTATTATATTCATTGATGAGATTGATTCAATTGCTCCCAAGCGAGAGAAGACA
CATGGTGAAGTTGAGAGAAGGATTGTTTCACAGCTCCTGACTCTGATGGATGGACTGAAA
TCTCGTGCTCATGTCATAGTTATGGGAGCTACCAATCGTCCTAACAGCATTGATCCTGCT
CTCAGAAGGTTTGGTAGGTTTGATAGGGAAATTGACATTGGTGTTCCTGATGAAATTGGA
CGTCTTGAAGTTCTTCGTATTCATACCAAGAATATGAAGCTTGCAGAAGAAGTTGATTTG
GAAAGAATATCAAAAGATACACATGGTTATGTCGGTGCAGATCTTGCTGCTCTTTGCACT
GAAGCTGCACTTCAGTGCATTAGAGAGAAAATGGATGTCATTGATCTGGAAGATGATTCC
ATTGATGCTGAAATATTGAATTCAATGGCTGTCACAAATGAGCACTTCCAAACTGCTCTA
GGAACAAGCAATCCATCTGCATTGCGTGAAACAGTTGTTGAAGTGCCTAATGTCTCATGG
GAAGATATTGGAGGTCTTGAAAATGTCAAAAGAGAGCTTCAAGAGACTGTTCAATACCCA
GTGGAGCATCCGGAGAAGTTCGAGAAATTTGGTATGTCACCTTCAAAAGGTGTTCTTTTC
TATGGTCCTCCAGGATGTGGGAAAACTCTTCTTGCCAAGGCAATTGCAAATGAGTGTCAA
GCCAATTTCATTAGTATCAAAGGACCTGAGCTGCTTACCATGTGGTTTGGAGAGAGTGAG
GCCAATGTCCGTGAAATTTTTGACAAGGCTAGACAATCTGCACCCTGTGTCCTCTTCTTT
GATGAGCTCGACTCTATTGCCACTCAGAGGGGAAGCAGTAGTGGTGATGCTGGTGGAGCA
GCTGATCGGGTTCTGAACCAACTTCTGACTGAAATGGATGGCATGAATGCAAAGAAAACA
GTTTTTATTATTGGGGCCACAAACAGGCCTGATATTATTGACCCTGCACTTCTGCGACCT
GGTCGACTTGACCAGTTAATTTATATCCCACTGCCCGATGAAGACTCACGCCATCAGATT
TTCAAGGCATGTCTTAGAAAATCTCCCCTATCAAAAGATATTGATTTGAGAGCTCTTGCC
AAGTATACTCAGGGATTTAGTGGAGCTGATATCACTGAGATCTGTCAACGGGCATGCAAA
TATGCCATAAGAGAGAACATTGAGAAAGATATAGAAAAGGAAAAGAGGCGAGCAGAGAAT
CCTGATTCTATGGATGAGGATGCTGATGATGAGATATCAGAGATTAAGCCTGCTCATTTT
GAGGAGTCCATGAAGTATGCACGACGAAGTGTGAGTGATGCCGATATTCGTAAATACCAG
GCATTTGCTCAGACCTTACAGCAATCTCGAGGTTTTGGAACTGAATTTCGGTTTTCTGAG
ACCAGTGGTGGGGCTGCTGCATCTGACCCCTTCACAACTTCTAATGCTGGAGCTGATGAT
GATGACTTGTATAGCTAA