Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031301
CDS Infomation

pacid=37450991 polypeptide=PGSC0003DMP400021228 locus=PGSC0003DMG400011997 ID=PGSC0003DMT400031301.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTGCAAATGGGATCTCCACTGCCTCTATTCTTCTTTCTTCCTCTAAACAGGTG
GGGTTGAAAGAAAGAAGGGTGAATCAATTGCAGAGACAGAAATTCAACAATAAGGCTTCA
AAGAGCCGATTAGTAGTAAGGGCAAATGCTAAAGATATTGCATTTGACCAGAAATCAAGA
GCTGCCCTTCAAGCAGGAATTGATAAGCTCGTTAATGTTGTCGGTCTCACTCTTGGTCCT
AAGGGGAGGAATGTGGTTTTAGACGACTATGATACCCCGAAAGTAGTTAACGATGGGGTC
ACGATTGCTCGTGCCATAGAGCTAGCTGATGCCATGGAAAATGCAGGCGCCACCCTTATC
AGAGAGGTTGCAAGCCTAACCAATGATGCTGCTGGTGACGGGACAACAACTGCATCCGTT
CTTGCCCGGGAAATCATTAAGCATGGTCTTTTAAGTGTTACATCTGGTGCAAATCCAGTC
TCTCTGAAGAGGGGCATTGACAAAACTGTAAATGCTTTGGTTGCAATGCTAGAAAGGAGG
GCTAGGCCTGTTAAAGGTCGTGATGACATCAAAGCTATTGCTTCTATCTCTGCTGGAAAT
GATGATGAGATCGGAACCATGATTGCTGATGCAATTGACAAAGTTGGTCCTGATGGTGTT
CTATCGATTGAGTCATCCTCTTCCTTTGAAACCACTGTTCGTGTTGAAGAAGGGATGGAG
ATTGATAAGGGATATATTTCCCCACAATTCATCACCAATCAGGAGAAACTAGTTGTTGAA
TTTGAGAATGCTCGAGTGTTGGTTACAGATTACGATATTTCAGCAATCAAGGATATTATG
CCCCTCTTGGAGAAGGCAACTCAATTACGAGCCCCTCTACTCATTATTGCTGGAGAAGTA
ACTGGAGAAGCTTTAGCTACTCTTATTGTGAACAAGCTGCGAGGTATACTGAATGTTGCT
GCCATCAGAGCACCTGGTTTTGGTCAAAGGAGGAAGGCTCTTCTTCAAGATATTGCCATT
GTAACAGGAGCCGAGTACCAGGCAGCTGATTTGTGTATGCCGGTTGAGAATACCCCGGTC
GAAGCACTTGGTTTTGCTAGAAAGGTGACTATCACCAAGGACTCAACAACCATCCTTGCT
GATGATGTGTCGAAGGACGAGATACAGGCTAGGATTTCTCAGATTAAAAAGGAGTTGGAC
AAGTCAGAATCAGTGTCTGACTCCGAGAAACTTTCTGAGAGAATTGCAAAGTTGTCTGGA
GGTGTTGCTGTCATAAAGGTTGGTGCTGCAACAGAAGCTGAGCTTGAGGACCGCAAGCTT
AGAATTGAGGATGCAAAAAATGCAACTTTTGCTGCAATTGAAGAGGGAATCGTACCTGGT
GGTGGTGCTGCGTTGGTTCATCTATCAAATAATGTCCCTGCCATTAAGGACAATCTTGAA
GATCCTGATGAGAAGTTGGGCGCTGACATTGTGCAGAAGGCATTAGTAGCTCCGGCATCT
TTGATAGCTCAGAATGCTGGGGTTGAAGGGGAAGTAGTAGTGGAGAAGATAAAGGCTAGC
AAATGGAGGATGGGTTACAATGCAATGACTGACAAGTATGAGGATTTAGTAGAAGCTGGT
GTCATCGACCCAGCCATGGTAACAAGATGTGCCTTGCAGAATGCAGCGTCAGTTGCAGGA
ATGGTTCTCACTACTCAAGCAATTGTCGTGGACAAAAAAATGCCTAATGCACCAGCATTT
GCTCCTCCACAAGGACTTCCCATGATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021228
PEP Infomation

pacid=37450991 transcript=PGSC0003DMT400031301 locus=PGSC0003DMG400011997 ID=PGSC0003DMT400031301.v4.03 annot-version=v4.03
Sequence

MASANGISTASILLSSSKQVGLKERRVNQLQRQKFNNKASKSRLVVRANAKDIAFDQKSR
AALQAGIDKLVNVVGLTLGPKGRNVVLDDYDTPKVVNDGVTIARAIELADAMENAGATLI
REVASLTNDAAGDGTTTASVLAREIIKHGLLSVTSGANPVSLKRGIDKTVNALVAMLERR
ARPVKGRDDIKAIASISAGNDDEIGTMIADAIDKVGPDGVLSIESSSSFETTVRVEEGME
IDKGYISPQFITNQEKLVVEFENARVLVTDYDISAIKDIMPLLEKATQLRAPLLIIAGEV
TGEALATLIVNKLRGILNVAAIRAPGFGQRRKALLQDIAIVTGAEYQAADLCMPVENTPV
EALGFARKVTITKDSTTILADDVSKDEIQARISQIKKELDKSESVSDSEKLSERIAKLSG
GVAVIKVGAATEAELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSNNVPAIKDNLE
DPDEKLGADIVQKALVAPASLIAQNAGVEGEVVVEKIKASKWRMGYNAMTDKYEDLVEAG
VIDPAMVTRCALQNAASVAGMVLTTQAIVVDKKMPNAPAFAPPQGLPMM*

Transcript Sequence

Transcript ID

PGSC0003DMT400031301
Transcript Infomation

pacid=37450991 locus=PGSC0003DMG400011997 ID=PGSC0003DMT400031301.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTGCAAATGGGATCTCCACTGCCTCTATTCTTCTTTCTTCCTCTAAACAGGTG
GGGTTGAAAGAAAGAAGGGTGAATCAATTGCAGAGACAGAAATTCAACAATAAGGCTTCA
AAGAGCCGATTAGTAGTAAGGGCAAATGCTAAAGATATTGCATTTGACCAGAAATCAAGA
GCTGCCCTTCAAGCAGGAATTGATAAGCTCGTTAATGTTGTCGGTCTCACTCTTGGTCCT
AAGGGGAGGAATGTGGTTTTAGACGACTATGATACCCCGAAAGTAGTTAACGATGGGGTC
ACGATTGCTCGTGCCATAGAGCTAGCTGATGCCATGGAAAATGCAGGCGCCACCCTTATC
AGAGAGGTTGCAAGCCTAACCAATGATGCTGCTGGTGACGGGACAACAACTGCATCCGTT
CTTGCCCGGGAAATCATTAAGCATGGTCTTTTAAGTGTTACATCTGGTGCAAATCCAGTC
TCTCTGAAGAGGGGCATTGACAAAACTGTAAATGCTTTGGTTGCAATGCTAGAAAGGAGG
GCTAGGCCTGTTAAAGGTCGTGATGACATCAAAGCTATTGCTTCTATCTCTGCTGGAAAT
GATGATGAGATCGGAACCATGATTGCTGATGCAATTGACAAAGTTGGTCCTGATGGTGTT
CTATCGATTGAGTCATCCTCTTCCTTTGAAACCACTGTTCGTGTTGAAGAAGGGATGGAG
ATTGATAAGGGATATATTTCCCCACAATTCATCACCAATCAGGAGAAACTAGTTGTTGAA
TTTGAGAATGCTCGAGTGTTGGTTACAGATTACGATATTTCAGCAATCAAGGATATTATG
CCCCTCTTGGAGAAGGCAACTCAATTACGAGCCCCTCTACTCATTATTGCTGGAGAAGTA
ACTGGAGAAGCTTTAGCTACTCTTATTGTGAACAAGCTGCGAGGTATACTGAATGTTGCT
GCCATCAGAGCACCTGGTTTTGGTCAAAGGAGGAAGGCTCTTCTTCAAGATATTGCCATT
GTAACAGGAGCCGAGTACCAGGCAGCTGATTTGTGTATGCCGGTTGAGAATACCCCGGTC
GAAGCACTTGGTTTTGCTAGAAAGGTGACTATCACCAAGGACTCAACAACCATCCTTGCT
GATGATGTGTCGAAGGACGAGATACAGGCTAGGATTTCTCAGATTAAAAAGGAGTTGGAC
AAGTCAGAATCAGTGTCTGACTCCGAGAAACTTTCTGAGAGAATTGCAAAGTTGTCTGGA
GGTGTTGCTGTCATAAAGGTTGGTGCTGCAACAGAAGCTGAGCTTGAGGACCGCAAGCTT
AGAATTGAGGATGCAAAAAATGCAACTTTTGCTGCAATTGAAGAGGGAATCGTACCTGGT
GGTGGTGCTGCGTTGGTTCATCTATCAAATAATGTCCCTGCCATTAAGGACAATCTTGAA
GATCCTGATGAGAAGTTGGGCGCTGACATTGTGCAGAAGGCATTAGTAGCTCCGGCATCT
TTGATAGCTCAGAATGCTGGGGTTGAAGGGGAAGTAGTAGTGGAGAAGATAAAGGCTAGC
AAATGGAGGATGGGTTACAATGCAATGACTGACAAGTATGAGGATTTAGTAGAAGCTGGT
GTCATCGACCCAGCCATGGTAACAAGATGTGCCTTGCAGAATGCAGCGTCAGTTGCAGGA
ATGGTTCTCACTACTCAAGCAATTGTCGTGGACAAAAAAATGCCTAATGCACCAGCATTT
GCTCCTCCACAAGGACTTCCCATGATGTAA