Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031245
CDS Infomation

pacid=37431995 polypeptide=PGSC0003DMP400021196 locus=PGSC0003DMG400011974 ID=PGSC0003DMT400031245.v4.03 annot-version=v4.03
Sequence

ATGGCTACTCCTCTCAAGAATACCAATAGACTTTCTCTTGCAATGGAAAGAACTGGCCAA
TGGGTATTTTCACAAGAAATTCCAACTGATGTTATTGTTGAAGTAGGTGAAGCAAACTTT
AATCTTCACAAGTTCATGCTAGTAGCAAAGAGCAATTACATAAGGAAACTTATACTTGAT
ACTAAAGAAAGTGATGTAAGTCGTATAAACTTATCGGATATTCCTGGAGGGCCAGAGATG
TTTGAGAAGGCAGCTAAGTTCTGCTACGGAGTTAACTTTGAAATCACAGTACATAACGTT
GCTGCTCTTCGTTGTGCTGCTGAATATCTTCAAATGACTGATAAATACTGTGACAACAAT
CTCGCAAGCCGAACAGAGGATTTTCTAGCTCAAGTTGCCTTGACTAGCCTTTCTGGTGCA
CTTGTTGTGTTAAAGTCATGTGAAAATCTTCTTCCTCTTGCACATGATCTCAATATCATT
CAAAGATGTGTTGACATCGCCGGTGCTAAGGCGTGTGTGGAAGCGAATTTTCCTAGCAGA
TCACCACCAAATTGGTGGACGGAAGAGTTAACTATCTTAGATGTAGCTTTTTTCGAGAGA
ATTATTGTTGCAATGAAAGCTCGTGGGGCAAAAGCACTAACAATAGCAAGTGCTATAATC
ACATATACAGAGAGATCTCTTCGTGATCTTGTACGTGACCACTCAGGAAACAACACGAGA
TTAATGGAACCAGAGGATTCGGATATGAGAATGCATCAACGGGAACTTCTGGAGTCGATT
GTGACTCTGTTGCCTGCGGAGAAAGCAGCTTTTCCAATCAATTTCTTGTGTTGTCTCCTG
CGTACAGCTATTTTCTTAAGAGCAGCCAGTAGCTGCAAGAATGAATTGGAGAAAAGGATA
TCAGCAATACTAGAACATGTGACAGTCGATGATTTGTTAGTGTTATCTTTTACTTATGAT
GGAGAAAGACTATTCGATCTTGAGAGCGTTAGGAGAATCATTTCTGGATTTATGGAGAAA
GAGAAGAGTGTAGCAGTGTTTAAAGGTGGTGATTTTGGAGATGTTTGTACCACGGCAATG
CAGAGAGTTGCAAAGACTGTCGATGCATATCTTGGTGAAATCGCTACTTTTGGAGATCTC
AGTATATCAAAATTCAATGGAATTGCTATTTTGGTTCCTAAGGGCGCGAGAAAAGCTGAT
GATGATCTTTATAGAGCTGTTGATATCTACTTGAAGGCACATCCACATTTGGATGAAATT
GAAAGAGAAAAAGTGTGCAGTGTGATGGATCCTCTGAAACTATCACATGAAGCCAGAGTC
CATGCTTCTCAAAACAAACGTTTGCCGGTGCAAATAGTCCTTCATGCTCTCTATTTCGAT
CAATTAAAGTTAAGGAGCGGGGCAGCAGATGATACCAATAACAACATGCCTGAAGCCATG
GCAACAAGGAATCAATTACAAGCCGATGTTTCCCTCGTAAAGGAAAATGAAGTTTTAAGA
ACAGAGTTGCTAAAGATGAAGATGTACATAGCAGATATACAGAAAACAACAACTTCTACT
CAAGGAACATCAAAAGGGGGTTTGAAGAAGACAACTTTCTTCTCTTCTGTCTCCAAAACA
TTAGGCAAATTCAATCCCTTTAAACATGGATCAAAGGACACTTCGAATATTGTTGATGAT
GCTGCTCTAGATCTTACTAAGCCTAGGAGGAGAAGATTTTCCATATCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021196
PEP Infomation

pacid=37431995 transcript=PGSC0003DMT400031245 locus=PGSC0003DMG400011974 ID=PGSC0003DMT400031245.v4.03 annot-version=v4.03
Sequence

MATPLKNTNRLSLAMERTGQWVFSQEIPTDVIVEVGEANFNLHKFMLVAKSNYIRKLILD
TKESDVSRINLSDIPGGPEMFEKAAKFCYGVNFEITVHNVAALRCAAEYLQMTDKYCDNN
LASRTEDFLAQVALTSLSGALVVLKSCENLLPLAHDLNIIQRCVDIAGAKACVEANFPSR
SPPNWWTEELTILDVAFFERIIVAMKARGAKALTIASAIITYTERSLRDLVRDHSGNNTR
LMEPEDSDMRMHQRELLESIVTLLPAEKAAFPINFLCCLLRTAIFLRAASSCKNELEKRI
SAILEHVTVDDLLVLSFTYDGERLFDLESVRRIISGFMEKEKSVAVFKGGDFGDVCTTAM
QRVAKTVDAYLGEIATFGDLSISKFNGIAILVPKGARKADDDLYRAVDIYLKAHPHLDEI
EREKVCSVMDPLKLSHEARVHASQNKRLPVQIVLHALYFDQLKLRSGAADDTNNNMPEAM
ATRNQLQADVSLVKENEVLRTELLKMKMYIADIQKTTTSTQGTSKGGLKKTTFFSSVSKT
LGKFNPFKHGSKDTSNIVDDAALDLTKPRRRRFSIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400031245
Transcript Infomation

pacid=37431995 locus=PGSC0003DMG400011974 ID=PGSC0003DMT400031245.v4.03 annot-version=v4.03
Sequence

ATGGCTACTCCTCTCAAGAATACCAATAGACTTTCTCTTGCAATGGAAAGAACTGGCCAA
TGGGTATTTTCACAAGAAATTCCAACTGATGTTATTGTTGAAGTAGGTGAAGCAAACTTT
AATCTTCACAAGTTCATGCTAGTAGCAAAGAGCAATTACATAAGGAAACTTATACTTGAT
ACTAAAGAAAGTGATGTAAGTCGTATAAACTTATCGGATATTCCTGGAGGGCCAGAGATG
TTTGAGAAGGCAGCTAAGTTCTGCTACGGAGTTAACTTTGAAATCACAGTACATAACGTT
GCTGCTCTTCGTTGTGCTGCTGAATATCTTCAAATGACTGATAAATACTGTGACAACAAT
CTCGCAAGCCGAACAGAGGATTTTCTAGCTCAAGTTGCCTTGACTAGCCTTTCTGGTGCA
CTTGTTGTGTTAAAGTCATGTGAAAATCTTCTTCCTCTTGCACATGATCTCAATATCATT
CAAAGATGTGTTGACATCGCCGGTGCTAAGGCGTGTGTGGAAGCGAATTTTCCTAGCAGA
TCACCACCAAATTGGTGGACGGAAGAGTTAACTATCTTAGATGTAGCTTTTTTCGAGAGA
ATTATTGTTGCAATGAAAGCTCGTGGGGCAAAAGCACTAACAATAGCAAGTGCTATAATC
ACATATACAGAGAGATCTCTTCGTGATCTTGTACGTGACCACTCAGGAAACAACACGAGA
TTAATGGAACCAGAGGATTCGGATATGAGAATGCATCAACGGGAACTTCTGGAGTCGATT
GTGACTCTGTTGCCTGCGGAGAAAGCAGCTTTTCCAATCAATTTCTTGTGTTGTCTCCTG
CGTACAGCTATTTTCTTAAGAGCAGCCAGTAGCTGCAAGAATGAATTGGAGAAAAGGATA
TCAGCAATACTAGAACATGTGACAGTCGATGATTTGTTAGTGTTATCTTTTACTTATGAT
GGAGAAAGACTATTCGATCTTGAGAGCGTTAGGAGAATCATTTCTGGATTTATGGAGAAA
GAGAAGAGTGTAGCAGTGTTTAAAGGTGGTGATTTTGGAGATGTTTGTACCACGGCAATG
CAGAGAGTTGCAAAGACTGTCGATGCATATCTTGGTGAAATCGCTACTTTTGGAGATCTC
AGTATATCAAAATTCAATGGAATTGCTATTTTGGTTCCTAAGGGCGCGAGAAAAGCTGAT
GATGATCTTTATAGAGCTGTTGATATCTACTTGAAGGCACATCCACATTTGGATGAAATT
GAAAGAGAAAAAGTGTGCAGTGTGATGGATCCTCTGAAACTATCACATGAAGCCAGAGTC
CATGCTTCTCAAAACAAACGTTTGCCGGTGCAAATAGTCCTTCATGCTCTCTATTTCGAT
CAATTAAAGTTAAGGAGCGGGGCAGCAGATGATACCAATAACAACATGCCTGAAGCCATG
GCAACAAGGAATCAATTACAAGCCGATGTTTCCCTCGTAAAGGAAAATGAAGTTTTAAGA
ACAGAGTTGCTAAAGATGAAGATGTACATAGCAGATATACAGAAAACAACAACTTCTACT
CAAGGAACATCAAAAGGGGGTTTGAAGAAGACAACTTTCTTCTCTTCTGTCTCCAAAACA
TTAGGCAAATTCAATCCCTTTAAACATGGATCAAAGGACACTTCGAATATTGTTGATGAT
GCTGCTCTAGATCTTACTAAGCCTAGGAGGAGAAGATTTTCCATATCTTAA