Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031240
CDS Infomation

pacid=37433986 polypeptide=PGSC0003DMP400021191 locus=PGSC0003DMG400011971 ID=PGSC0003DMT400031240.v4.03 annot-version=v4.03
Sequence

ATGACGACGAAAGCAGAGCTTGTTTTCATTCCTTCGGCGGGAGCAGGTCACCTTATCTCC
GCCGTTGAAATTGCAAAGCTCATTCTCAACAGAGATGAGAGGTTCTGCATCTCTATCCTC
ATTATGAAGCTTCCAATGGATTTCGGTACTCAATCTTACATCGAATCACTCTCATCTATA
CCCCGTTTGCAGTTCGTTGACATCTCCGTTGACGAGAAAACTATTGGTGGATTCATGTCA
AATAAGGAGACCTTCTTCATAAACTTCATTCAGAGTCATAAACCAAAAGTAAAAGATTTT
TTGAATAACTCCAGCTTTTCTAGATCTAATTCTCGTCTCGCAGGCTTCGTTCTCGACATG
TTCTGCACCCCTATGATAGACGTGGCCAATGAATTTTGTGTTCCTAGTTACATTTTTCTT
ACCTCAAGTGCTGCTTTCCTTGCCCTATGTTTTCATTTTGAATCTCTAAAAAAGGTACAT
CATATTGACACCTCCAAATACAAGCATTCCAATGAAGAATTAATAATCCCGGGTTTTAAA
AACCCATATCCTGCGAAATTCTTGCCTACCATGGCAACGGATCAAGGGGTCATGTATGCC
ATGTTCTTCGATTTGGTTACTCGTTTCAAAGAGATGAAGGGTATTATGGTCAACACCTTC
GCCGATCTAGAACCTTTTCCTCTTCAGTCTCTTTCAGTTCCGCGAATTTATCCAGTTGGT
CCAGTGGTGAATTTTAAGGAAGGAGGTCATGGTCGAAACAGTCCATCCGAAACAGAAAGC
ATTATCAAATGGTTAGATGATCAGCCAGAGTCCTCTGTAGTGTTTTTGTGCTTCGGAAGT
ATGGGAAGCTTTGAAATCGAACAGATCAATGAAATAGCAATTGCACTTGAGTTTAGTGGT
CATAGATTCTTATGGTCCTTACGAAGACCACTACCAAAGGGGCAAATCGGTCTTCCGAGT
AATTATGAGAATGTTGAGGAAGTGCTACCAGAAGGGTTTATTGAAAGGACAAATGAGGTT
GGCAAAGTGATAGGATGGGCACCTCAAGTGGCAATACTATCTCATCGAGCAGTTGGTGGA
TTTGTATCGCATTGTGGATGGAACTCTATACTCGAAAGCTTGTATTTTGGGGTACCAATA
GCCACTTGGCCTCTTTTTGCTGAACAACAAATGAATGCGTTTGCGTTGGTTAAAGAGTTG
GGAGTGGGAGTGGAGATTCGAATGGACTATTTCGTGGGGAAATATGAGCATGTCGACATT
GTGACTGCCAAGGAAATTGAAAGTGGCATACGACTGTTGATGGCTAATGGCGATGACAAT
GAAATAAGGAAAAAGGCGAAGGAGATGAAAGAGAAAAGCAATGCAGCTATGAAGGAGGGT
GGTTCATCTTATGCATCTCTTGGGCTTCTAATTGAGGATCTCATTAGTAACATTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400021191
PEP Infomation

pacid=37433986 transcript=PGSC0003DMT400031240 locus=PGSC0003DMG400011971 ID=PGSC0003DMT400031240.v4.03 annot-version=v4.03
Sequence

MTTKAELVFIPSAGAGHLISAVEIAKLILNRDERFCISILIMKLPMDFGTQSYIESLSSI
PRLQFVDISVDEKTIGGFMSNKETFFINFIQSHKPKVKDFLNNSSFSRSNSRLAGFVLDM
FCTPMIDVANEFCVPSYIFLTSSAAFLALCFHFESLKKVHHIDTSKYKHSNEELIIPGFK
NPYPAKFLPTMATDQGVMYAMFFDLVTRFKEMKGIMVNTFADLEPFPLQSLSVPRIYPVG
PVVNFKEGGHGRNSPSETESIIKWLDDQPESSVVFLCFGSMGSFEIEQINEIAIALEFSG
HRFLWSLRRPLPKGQIGLPSNYENVEEVLPEGFIERTNEVGKVIGWAPQVAILSHRAVGG
FVSHCGWNSILESLYFGVPIATWPLFAEQQMNAFALVKELGVGVEIRMDYFVGKYEHVDI
VTAKEIESGIRLLMANGDDNEIRKKAKEMKEKSNAAMKEGGSSYASLGLLIEDLISNIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400031240
Transcript Infomation

pacid=37433986 locus=PGSC0003DMG400011971 ID=PGSC0003DMT400031240.v4.03 annot-version=v4.03
Sequence

ATGACGACGAAAGCAGAGCTTGTTTTCATTCCTTCGGCGGGAGCAGGTCACCTTATCTCC
GCCGTTGAAATTGCAAAGCTCATTCTCAACAGAGATGAGAGGTTCTGCATCTCTATCCTC
ATTATGAAGCTTCCAATGGATTTCGGTACTCAATCTTACATCGAATCACTCTCATCTATA
CCCCGTTTGCAGTTCGTTGACATCTCCGTTGACGAGAAAACTATTGGTGGATTCATGTCA
AATAAGGAGACCTTCTTCATAAACTTCATTCAGAGTCATAAACCAAAAGTAAAAGATTTT
TTGAATAACTCCAGCTTTTCTAGATCTAATTCTCGTCTCGCAGGCTTCGTTCTCGACATG
TTCTGCACCCCTATGATAGACGTGGCCAATGAATTTTGTGTTCCTAGTTACATTTTTCTT
ACCTCAAGTGCTGCTTTCCTTGCCCTATGTTTTCATTTTGAATCTCTAAAAAAGGTACAT
CATATTGACACCTCCAAATACAAGCATTCCAATGAAGAATTAATAATCCCGGGTTTTAAA
AACCCATATCCTGCGAAATTCTTGCCTACCATGGCAACGGATCAAGGGGTCATGTATGCC
ATGTTCTTCGATTTGGTTACTCGTTTCAAAGAGATGAAGGGTATTATGGTCAACACCTTC
GCCGATCTAGAACCTTTTCCTCTTCAGTCTCTTTCAGTTCCGCGAATTTATCCAGTTGGT
CCAGTGGTGAATTTTAAGGAAGGAGGTCATGGTCGAAACAGTCCATCCGAAACAGAAAGC
ATTATCAAATGGTTAGATGATCAGCCAGAGTCCTCTGTAGTGTTTTTGTGCTTCGGAAGT
ATGGGAAGCTTTGAAATCGAACAGATCAATGAAATAGCAATTGCACTTGAGTTTAGTGGT
CATAGATTCTTATGGTCCTTACGAAGACCACTACCAAAGGGGCAAATCGGTCTTCCGAGT
AATTATGAGAATGTTGAGGAAGTGCTACCAGAAGGGTTTATTGAAAGGACAAATGAGGTT
GGCAAAGTGATAGGATGGGCACCTCAAGTGGCAATACTATCTCATCGAGCAGTTGGTGGA
TTTGTATCGCATTGTGGATGGAACTCTATACTCGAAAGCTTGTATTTTGGGGTACCAATA
GCCACTTGGCCTCTTTTTGCTGAACAACAAATGAATGCGTTTGCGTTGGTTAAAGAGTTG
GGAGTGGGAGTGGAGATTCGAATGGACTATTTCGTGGGGAAATATGAGCATGTCGACATT
GTGACTGCCAAGGAAATTGAAAGTGGCATACGACTGTTGATGGCTAATGGCGATGACAAT
GAAATAAGGAAAAAGGCGAAGGAGATGAAAGAGAAAAGCAATGCAGCTATGAAGGAGGGT
GGTTCATCTTATGCATCTCTTGGGCTTCTAATTGAGGATCTCATTAGTAACATTTCTTGA