Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031223
CDS Infomation

pacid=37459944 polypeptide=PGSC0003DMP400021182 locus=PGSC0003DMG400011962 ID=PGSC0003DMT400031223.v4.03 annot-version=v4.03
Sequence

ATGGATACCAAGCATAGCACATCAAATCTACCTTGGATATGGGTGATTGAAACATTGGCA
ACTTTCAAAGAGATAGACACATCTTTACTCATTGATTTGGTTAAGCGGACTCCAGAAATT
TCTGATGAAATGGGAAGAAATGCAAGGGAGCTTGTCTCCTTGAGAGTTTTAGAGACCTTG
TCTGTCCAGGAAATCTCAAATGCAAATAATGATGCTTCAGTTCCCGGTGATAAAATTGAA
TTGGATCGATCAGTGCACTGTGAAGATGTCCTTCGCCACTTATTGTTGGGGGTCTCATCA
GATCAAAAAATGGATGGGCCAGAGGTGTCAAAATGGGATGTTCAGTCATTTATTACCGAA
AAAAGATCTTGCTTGCCAAAATGTGCTTTGCAACAAATTAAGGATACTGTAGATACTACC
AATCCTCTTTCTACATCCTTGGAAGCAAGTAACAGATCGGAGGTCGGCAGTCACTCCAGA
GATGGAGATCGTTTTAATGCTGTTGATTCTAATGGCATTAACCAGAGTTGTGAAGTAGGC
GCTGATGCTCAGCATGAACATGTTTTAACAAGTGGGAATGCAACTCCTTGTTTGGGGGCC
AACACTAATGGCCTGCAAGAAAATCAACCTAGGACTCTGGTTCCTTTTAAGAGGACGATT
GATGCCATTACTGCTCATGAAGTAGAACATAGTGAAACTGAACCCTTATCAGAAAACAGT
TCTGGTACTTGCATAAGGCCCTCCAAAAGGTTTAAGCAGGAAGTCATTAGTCCCAGGTGT
GATGCAGTTCATGATTTTGAATCATCTCAAAAAGATGGTGTTTCAACAGAGTTGTCTGCA
CAAATTCCCCATGCTATTGTCCAAAAAGGGAACTTGGAATATGGAGCTCTTGTTGGGGGA
TTGGATGGTAGTTGTGAGGGTGCTGCATCAAAAATGGTTAGACAGAACATTGATACCAGT
AACCATGATGATCGATTGCCTGAAATAATGATTTCAGAGGAAAAGATCCAAAATGTTGTA
AGTAGCAGCAAAGCTTGTGATGAATTGAGAACATCAAGTGGTTCATCACAGCAGCAGGTA
ATTCATCAGGATTCTTGCATTCATGGAGCTAAAGATCATCGGAAGTGCATTCGGGGAAAT
TTGTTCAAAGATGAACCTTCTGAAGGAGCCAAAAAGAATATTGTGGGAAGTGATGAACCT
GATTTCTCTAGTGACAGTGATGGATATCACAATGAAATGACTGGCCTTTCCGCAAAGAGA
AATGATTTTCTTAGCTCTCAGGGTCAAGATCCCTTGACAACTGAAAATGGTAGAGTGCTC
AATCTTTGTGTGAAATGTAATGAAGGTGGGCAACTGTTGATTTGCAGTTCGAACACCTGC
CCGTTAGTGGTTCATCAGAGCTGCTTGGGTTCTGTTCCCAGCTTCGATAATGGAGGAAAC
TTTTACTGTCCCTTTTGTGCATATTCTCGAGCGATTTCTGAGTACCTAGAAGGTAAAAAG
ATGTCTTTGCTTGCAAGGAAAGATTTGGCTTCATTCGTTGGCGTTGGGGCTAGGCGACAA
TCAAAGAAATCCTCACGTAACTCACGTAGATCAAAGAAGAACCAGTCTAGAGAGGATGAA
GAACTGTGCCATGATAAAAATAATAAGGATGTTTTGAATGATGTCATAGAAGCCAGGAGT
GCTCCAGTCTGTACAAATTCTTTGAATGGTAAAATTACGGAGATGCCTTCACCTCAACCA
GAGGCTTCTGTGACTCATGAACCCGTGGCGGCTGGACCAAGATCCAAGATATCACCACCT
AGATCGCATAGATCAAAGCAGAAACTATCCAGGGAGGAAGAAGAATTGTGTCACAACGAG
GACAGCAAGAAGAAATCCTTGAACCAGGTCCAAGAACCAGGAAATGCTCCAGTCAGTATA
AGTTCTCCTAATGCTGAATTTACACAGATAGGTTCACCTCAACCAGAGGCGTCTGCACCT
CCTGAACTTGTGAGCGGACAGAGTGGTTTTGAAGAAGAAAGTTCTGAAGATGAAGACACA
ATTGCTTCCCGATATTGTGTGCGATTTAGGAATTCAGACAAGAACTATTTCTTCAAATTT
GCAGTACCTATCCTGCAATTTCTCAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400021182
PEP Infomation

pacid=37459944 transcript=PGSC0003DMT400031223 locus=PGSC0003DMG400011962 ID=PGSC0003DMT400031223.v4.03 annot-version=v4.03
Sequence

MDTKHSTSNLPWIWVIETLATFKEIDTSLLIDLVKRTPEISDEMGRNARELVSLRVLETL
SVQEISNANNDASVPGDKIELDRSVHCEDVLRHLLLGVSSDQKMDGPEVSKWDVQSFITE
KRSCLPKCALQQIKDTVDTTNPLSTSLEASNRSEVGSHSRDGDRFNAVDSNGINQSCEVG
ADAQHEHVLTSGNATPCLGANTNGLQENQPRTLVPFKRTIDAITAHEVEHSETEPLSENS
SGTCIRPSKRFKQEVISPRCDAVHDFESSQKDGVSTELSAQIPHAIVQKGNLEYGALVGG
LDGSCEGAASKMVRQNIDTSNHDDRLPEIMISEEKIQNVVSSSKACDELRTSSGSSQQQV
IHQDSCIHGAKDHRKCIRGNLFKDEPSEGAKKNIVGSDEPDFSSDSDGYHNEMTGLSAKR
NDFLSSQGQDPLTTENGRVLNLCVKCNEGGQLLICSSNTCPLVVHQSCLGSVPSFDNGGN
FYCPFCAYSRAISEYLEGKKMSLLARKDLASFVGVGARRQSKKSSRNSRRSKKNQSREDE
ELCHDKNNKDVLNDVIEARSAPVCTNSLNGKITEMPSPQPEASVTHEPVAAGPRSKISPP
RSHRSKQKLSREEEELCHNEDSKKKSLNQVQEPGNAPVSISSPNAEFTQIGSPQPEASAP
PELVSGQSGFEEESSEDEDTIASRYCVRFRNSDKNYFFKFAVPILQFLK*

Transcript Sequence

Transcript ID

PGSC0003DMT400031223
Transcript Infomation

pacid=37459944 locus=PGSC0003DMG400011962 ID=PGSC0003DMT400031223.v4.03 annot-version=v4.03
Sequence

ATGGATACCAAGCATAGCACATCAAATCTACCTTGGATATGGGTGATTGAAACATTGGCA
ACTTTCAAAGAGATAGACACATCTTTACTCATTGATTTGGTTAAGCGGACTCCAGAAATT
TCTGATGAAATGGGAAGAAATGCAAGGGAGCTTGTCTCCTTGAGAGTTTTAGAGACCTTG
TCTGTCCAGGAAATCTCAAATGCAAATAATGATGCTTCAGTTCCCGGTGATAAAATTGAA
TTGGATCGATCAGTGCACTGTGAAGATGTCCTTCGCCACTTATTGTTGGGGGTCTCATCA
GATCAAAAAATGGATGGGCCAGAGGTGTCAAAATGGGATGTTCAGTCATTTATTACCGAA
AAAAGATCTTGCTTGCCAAAATGTGCTTTGCAACAAATTAAGGATACTGTAGATACTACC
AATCCTCTTTCTACATCCTTGGAAGCAAGTAACAGATCGGAGGTCGGCAGTCACTCCAGA
GATGGAGATCGTTTTAATGCTGTTGATTCTAATGGCATTAACCAGAGTTGTGAAGTAGGC
GCTGATGCTCAGCATGAACATGTTTTAACAAGTGGGAATGCAACTCCTTGTTTGGGGGCC
AACACTAATGGCCTGCAAGAAAATCAACCTAGGACTCTGGTTCCTTTTAAGAGGACGATT
GATGCCATTACTGCTCATGAAGTAGAACATAGTGAAACTGAACCCTTATCAGAAAACAGT
TCTGGTACTTGCATAAGGCCCTCCAAAAGGTTTAAGCAGGAAGTCATTAGTCCCAGGTGT
GATGCAGTTCATGATTTTGAATCATCTCAAAAAGATGGTGTTTCAACAGAGTTGTCTGCA
CAAATTCCCCATGCTATTGTCCAAAAAGGGAACTTGGAATATGGAGCTCTTGTTGGGGGA
TTGGATGGTAGTTGTGAGGGTGCTGCATCAAAAATGGTTAGACAGAACATTGATACCAGT
AACCATGATGATCGATTGCCTGAAATAATGATTTCAGAGGAAAAGATCCAAAATGTTGTA
AGTAGCAGCAAAGCTTGTGATGAATTGAGAACATCAAGTGGTTCATCACAGCAGCAGGTA
ATTCATCAGGATTCTTGCATTCATGGAGCTAAAGATCATCGGAAGTGCATTCGGGGAAAT
TTGTTCAAAGATGAACCTTCTGAAGGAGCCAAAAAGAATATTGTGGGAAGTGATGAACCT
GATTTCTCTAGTGACAGTGATGGATATCACAATGAAATGACTGGCCTTTCCGCAAAGAGA
AATGATTTTCTTAGCTCTCAGGGTCAAGATCCCTTGACAACTGAAAATGGTAGAGTGCTC
AATCTTTGTGTGAAATGTAATGAAGGTGGGCAACTGTTGATTTGCAGTTCGAACACCTGC
CCGTTAGTGGTTCATCAGAGCTGCTTGGGTTCTGTTCCCAGCTTCGATAATGGAGGAAAC
TTTTACTGTCCCTTTTGTGCATATTCTCGAGCGATTTCTGAGTACCTAGAAGGTAAAAAG
ATGTCTTTGCTTGCAAGGAAAGATTTGGCTTCATTCGTTGGCGTTGGGGCTAGGCGACAA
TCAAAGAAATCCTCACGTAACTCACGTAGATCAAAGAAGAACCAGTCTAGAGAGGATGAA
GAACTGTGCCATGATAAAAATAATAAGGATGTTTTGAATGATGTCATAGAAGCCAGGAGT
GCTCCAGTCTGTACAAATTCTTTGAATGGTAAAATTACGGAGATGCCTTCACCTCAACCA
GAGGCTTCTGTGACTCATGAACCCGTGGCGGCTGGACCAAGATCCAAGATATCACCACCT
AGATCGCATAGATCAAAGCAGAAACTATCCAGGGAGGAAGAAGAATTGTGTCACAACGAG
GACAGCAAGAAGAAATCCTTGAACCAGGTCCAAGAACCAGGAAATGCTCCAGTCAGTATA
AGTTCTCCTAATGCTGAATTTACACAGATAGGTTCACCTCAACCAGAGGCGTCTGCACCT
CCTGAACTTGTGAGCGGACAGAGTGGTTTTGAAGAAGAAAGTTCTGAAGATGAAGACACA
ATTGCTTCCCGATATTGTGTGCGATTTAGGAATTCAGACAAGAACTATTTCTTCAAATTT
GCAGTACCTATCCTGCAATTTCTCAAGTGA