Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400031178
CDS Infomation

pacid=37479449 polypeptide=PGSC0003DMP400021149 locus=PGSC0003DMG400011941 ID=PGSC0003DMT400031178.v4.03 annot-version=v4.03
Sequence

ATGGCTATATCAAATCGGTTACTGTCGTTAGTTCTCTTCTCGTTGATGGTTACTTGTGCA
TTCGCTGAAAAACCTAGAGGTGTTACTTATGATGGTCGTTCCATGATCGTCAATGGTGAA
AGAGAATTGCTCTTTTCTGGTTCCATTCATTATCCTCGTATGCCTCCTCAGATGTGGCCA
GACATTATAAGGAAAGCTAAGGAGGGAGGTTTAAACCTTATTCAGACTTATGTTTTCTGG
AATATCCACGAGCCCGTTCAAGGCCAGTTCAACTTTGAAGGAAACTATGACGTTGTCAAG
TTCATCAAGGAAATTGCTCGACAGGGCTTGTATGTCACCCTCAGGATCGGACCATATATC
GAGGCTGAATGGAATCAAGGAGGATTCCCATACTGGCTAAGGGAGGTCCCAAACATCACC
TTCCGTTCTTACAATGAACCATTCATCTACCACATGAAAAAGTACTCAGAAATGGTCATT
GATTTGATGAAGAAGGAAAAGTTGTTTGCACCTCAAGGAGGCCCTATCATCATGGCTCAA
ATCGAAAATGAATACAACAATGTTCAACTAGCTTACAGAGATAATGGTAAGAAATACGTC
GAGTGGGCTGCCAATATGGCAACTTCACTATACGATGGAGTCCCATGGATCATGTGTAAG
CAAAAGGATGCCCCTCCACATATCATCAACACATGCAATGGAAGGCATTGTGCAGATACA
TTCAAAGGTCCCAATGGTCCTAACAAACCTTCTCTATGGACTGAAAATTGGACCGCTCAG
TACAGGACATTCGGAGATCCACCATCACAAAGAGCAGCAGAGGATATTGCATTCTCTGTA
GCCCGTTTCTTCGCAAAGAATGGAACTCTTACAAACTATTACATGTACTATGGTGGAACC
AACTATGGAAGGACAAGCTCATCATTCGTGACAACTCGTTACTATGATGAAGCTCCTCTT
GATGAGTTCGGTTTGTTTAGGGAACCAAAATGGAGTCATTTGAGGGATTTACACAGGGCT
TTGAGGCTATCCAGAAGGGCTCTCCTTTGGGGAACTCCCACAGTACAAAAAGTTAACAGA
GACATTGAGATTACAATTTATGAGAAGAAAGGAAGTGATTGTGCTGCATTTTTAACCAAC
AACCACACAACTAACCCCGCGACAGTCAAATTCAGGGGTAAAGATTATTACCTACCTGAG
AAATCCGTTAGCATTCTCCCCGACTGCAAGACTGTTGTCTACAACACTCAAACGATTGTG
TCTCAACACAATTCAAGGAACTTTGTGGCATCAGAGAAGGCAAAGGGTCTAAAATGGGAA
AAGTACCAAGAAAAAGTCCCAACCATAAGTGAATTATCACTTAAAAACAGGGAACCTTTG
GAACTTTATACTTTGACTAAGGATACCTCAGATTATGCTTGGTACAGTACAAGTATCAAA
TTCGATCGCCATGACTTGCCCATGAGACCTGACATCCTCCCCGTGCTACAAATCGCAAGT
ATGGGTCATGCATTAGCTGCCTTTGTTAACGGAGAATACATTGGGTTTGGACATGGTAAC
AACATCGAGAAGAGCTTCGTATTCCAGAAGCCTATCGTGTTGAAGCCTGGAACTAACACC
ATCTCAATTCTAGCTGAGACAGTTGGCTTCCCGAATAGCGGAGCCTACATGGAAAAGAGG
TTTGCTGGACCCAGAGCAATAACCATTCAAGGTTTGATGGCTGGTACTCTTGATATAACT
CAAAACGATTGGGGACATGAGGTTGGTGTATTTGGAGAGAAAGAGCAATTATTCAGTGAA
GAGGGTGCAAAGAAAGTAAAATGGACACCAGTAACTGGTCCTACTAATGGAGCTGTTACT
TGGTACAAGACCACCTTTGAAGCACCTGAAGGCAACAACCCATTGGCTGTGAAAATGGAC
AAAATGCAAAAGGGTATGATGTGGGTGAATGGTAATAGCCTTGGTCGTTATTGGTCATCT
TTCCTCTCCCCACTTGGACAACCCACTCAGTTCGAGTATCACATTCCAAGAGCTTTCTTG
AAGCCAACTGACAATGTCCTAGTTGTGTTTGAGGAAACCGGTGGTAATCCAGCAGATATT
GAAATCCAAACAGTAAACAGAGACACAATATGCAGTATCATCACGGAATATCATCCTCCA
AATGTAAAATCATGGGAGAGATCTGGTACTAACTTTGTCGCGATAGTAGAAGATCTCAAA
ACAGGAGCACATTTAACATGCCCAGACGACAAAATCATCGAAAAAGTTGAATTTGCTAGT
TATGGTAATCCAGATGGTGCTTGTGGAAACTTGATTGTTGGAACTTGCAATTCAGCAAAG
AGTATGCAAGTTGCAGAAGAGAAATGCTTAGGGAAGAACTCGTGCACAATCCCAATTGAG
AGAGAAATTTACGACGAGCCGAGCAAGGACCCATGCCCTGACATCTTTAAGACTTTGGCT
GTTCAAATGAAGTGTGGGAACAAGAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021149
PEP Infomation

pacid=37479449 transcript=PGSC0003DMT400031178 locus=PGSC0003DMG400011941 ID=PGSC0003DMT400031178.v4.03 annot-version=v4.03
Sequence

MAISNRLLSLVLFSLMVTCAFAEKPRGVTYDGRSMIVNGERELLFSGSIHYPRMPPQMWP
DIIRKAKEGGLNLIQTYVFWNIHEPVQGQFNFEGNYDVVKFIKEIARQGLYVTLRIGPYI
EAEWNQGGFPYWLREVPNITFRSYNEPFIYHMKKYSEMVIDLMKKEKLFAPQGGPIIMAQ
IENEYNNVQLAYRDNGKKYVEWAANMATSLYDGVPWIMCKQKDAPPHIINTCNGRHCADT
FKGPNGPNKPSLWTENWTAQYRTFGDPPSQRAAEDIAFSVARFFAKNGTLTNYYMYYGGT
NYGRTSSSFVTTRYYDEAPLDEFGLFREPKWSHLRDLHRALRLSRRALLWGTPTVQKVNR
DIEITIYEKKGSDCAAFLTNNHTTNPATVKFRGKDYYLPEKSVSILPDCKTVVYNTQTIV
SQHNSRNFVASEKAKGLKWEKYQEKVPTISELSLKNREPLELYTLTKDTSDYAWYSTSIK
FDRHDLPMRPDILPVLQIASMGHALAAFVNGEYIGFGHGNNIEKSFVFQKPIVLKPGTNT
ISILAETVGFPNSGAYMEKRFAGPRAITIQGLMAGTLDITQNDWGHEVGVFGEKEQLFSE
EGAKKVKWTPVTGPTNGAVTWYKTTFEAPEGNNPLAVKMDKMQKGMMWVNGNSLGRYWSS
FLSPLGQPTQFEYHIPRAFLKPTDNVLVVFEETGGNPADIEIQTVNRDTICSIITEYHPP
NVKSWERSGTNFVAIVEDLKTGAHLTCPDDKIIEKVEFASYGNPDGACGNLIVGTCNSAK
SMQVAEEKCLGKNSCTIPIEREIYDEPSKDPCPDIFKTLAVQMKCGNKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400031178
Transcript Infomation

pacid=37479449 locus=PGSC0003DMG400011941 ID=PGSC0003DMT400031178.v4.03 annot-version=v4.03
Sequence

ATGGCTATATCAAATCGGTTACTGTCGTTAGTTCTCTTCTCGTTGATGGTTACTTGTGCA
TTCGCTGAAAAACCTAGAGGTGTTACTTATGATGGTCGTTCCATGATCGTCAATGGTGAA
AGAGAATTGCTCTTTTCTGGTTCCATTCATTATCCTCGTATGCCTCCTCAGATGTGGCCA
GACATTATAAGGAAAGCTAAGGAGGGAGGTTTAAACCTTATTCAGACTTATGTTTTCTGG
AATATCCACGAGCCCGTTCAAGGCCAGTTCAACTTTGAAGGAAACTATGACGTTGTCAAG
TTCATCAAGGAAATTGCTCGACAGGGCTTGTATGTCACCCTCAGGATCGGACCATATATC
GAGGCTGAATGGAATCAAGGAGGATTCCCATACTGGCTAAGGGAGGTCCCAAACATCACC
TTCCGTTCTTACAATGAACCATTCATCTACCACATGAAAAAGTACTCAGAAATGGTCATT
GATTTGATGAAGAAGGAAAAGTTGTTTGCACCTCAAGGAGGCCCTATCATCATGGCTCAA
ATCGAAAATGAATACAACAATGTTCAACTAGCTTACAGAGATAATGGTAAGAAATACGTC
GAGTGGGCTGCCAATATGGCAACTTCACTATACGATGGAGTCCCATGGATCATGTGTAAG
CAAAAGGATGCCCCTCCACATATCATCAACACATGCAATGGAAGGCATTGTGCAGATACA
TTCAAAGGTCCCAATGGTCCTAACAAACCTTCTCTATGGACTGAAAATTGGACCGCTCAG
TACAGGACATTCGGAGATCCACCATCACAAAGAGCAGCAGAGGATATTGCATTCTCTGTA
GCCCGTTTCTTCGCAAAGAATGGAACTCTTACAAACTATTACATGTACTATGGTGGAACC
AACTATGGAAGGACAAGCTCATCATTCGTGACAACTCGTTACTATGATGAAGCTCCTCTT
GATGAGTTCGGTTTGTTTAGGGAACCAAAATGGAGTCATTTGAGGGATTTACACAGGGCT
TTGAGGCTATCCAGAAGGGCTCTCCTTTGGGGAACTCCCACAGTACAAAAAGTTAACAGA
GACATTGAGATTACAATTTATGAGAAGAAAGGAAGTGATTGTGCTGCATTTTTAACCAAC
AACCACACAACTAACCCCGCGACAGTCAAATTCAGGGGTAAAGATTATTACCTACCTGAG
AAATCCGTTAGCATTCTCCCCGACTGCAAGACTGTTGTCTACAACACTCAAACGATTGTG
TCTCAACACAATTCAAGGAACTTTGTGGCATCAGAGAAGGCAAAGGGTCTAAAATGGGAA
AAGTACCAAGAAAAAGTCCCAACCATAAGTGAATTATCACTTAAAAACAGGGAACCTTTG
GAACTTTATACTTTGACTAAGGATACCTCAGATTATGCTTGGTACAGTACAAGTATCAAA
TTCGATCGCCATGACTTGCCCATGAGACCTGACATCCTCCCCGTGCTACAAATCGCAAGT
ATGGGTCATGCATTAGCTGCCTTTGTTAACGGAGAATACATTGGGTTTGGACATGGTAAC
AACATCGAGAAGAGCTTCGTATTCCAGAAGCCTATCGTGTTGAAGCCTGGAACTAACACC
ATCTCAATTCTAGCTGAGACAGTTGGCTTCCCGAATAGCGGAGCCTACATGGAAAAGAGG
TTTGCTGGACCCAGAGCAATAACCATTCAAGGTTTGATGGCTGGTACTCTTGATATAACT
CAAAACGATTGGGGACATGAGGTTGGTGTATTTGGAGAGAAAGAGCAATTATTCAGTGAA
GAGGGTGCAAAGAAAGTAAAATGGACACCAGTAACTGGTCCTACTAATGGAGCTGTTACT
TGGTACAAGACCACCTTTGAAGCACCTGAAGGCAACAACCCATTGGCTGTGAAAATGGAC
AAAATGCAAAAGGGTATGATGTGGGTGAATGGTAATAGCCTTGGTCGTTATTGGTCATCT
TTCCTCTCCCCACTTGGACAACCCACTCAGTTCGAGTATCACATTCCAAGAGCTTTCTTG
AAGCCAACTGACAATGTCCTAGTTGTGTTTGAGGAAACCGGTGGTAATCCAGCAGATATT
GAAATCCAAACAGTAAACAGAGACACAATATGCAGTATCATCACGGAATATCATCCTCCA
AATGTAAAATCATGGGAGAGATCTGGTACTAACTTTGTCGCGATAGTAGAAGATCTCAAA
ACAGGAGCACATTTAACATGCCCAGACGACAAAATCATCGAAAAAGTTGAATTTGCTAGT
TATGGTAATCCAGATGGTGCTTGTGGAAACTTGATTGTTGGAACTTGCAATTCAGCAAAG
AGTATGCAAGTTGCAGAAGAGAAATGCTTAGGGAAGAACTCGTGCACAATCCCAATTGAG
AGAGAAATTTACGACGAGCCGAGCAAGGACCCATGCCCTGACATCTTTAAGACTTTGGCT
GTTCAAATGAAGTGTGGGAACAAGAACTAA