Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030976
CDS Infomation

pacid=37478121 polypeptide=PGSC0003DMP400021041 locus=PGSC0003DMG400011868 ID=PGSC0003DMT400030976.v4.03 annot-version=v4.03
Sequence

ATGCAGAGGTTTGTAACAGCAAGGGCAAAATGGGTAGGAGAGTTGCGAGGTTTATCGCAG
CGTTGTTATTCTCAATTTGGCTTAGCATCCCAAAAGGACGATGATATGATCATCAATCCT
CGGATGCCGCACTTCGACTACTCTCCGCCGCCGTACAATGGACCCTCCGCCGATGAAATT
TTGAGCAAACGGAAGGAATTTCTTAGCCCTTCTATGTTTTACTTCTATGAAAAAAACCCG
CTGCATTTGGTACATGGAAAGATGCAATACTTATTTGACAGCAATGGACGTCGATATCTT
GATGCATTTGGAGGAATTGCAACTGTATCTTGTGGACACTGCCACCCTGATGTGGTAGAG
GCCATCGTAAACCAAACCAAACGCTTACAGCACTCGACTATCTTATACCTCAATAACGCA
ATTACTGATTTTGCTGAGGCACTTGCTTCTAAGTTACCTGGTGATCTCAAGGTTGTGTTC
TTCACCAATTCCGGGACTGAGGCAAATGAGTTAGCAATTATGATGGCAAGATTATACACC
GGTTGTCATGATATCATTTCTCTAAGGAATGCTTACCATGGAAATGCAGCTGCCACTATG
AGCACCACTGGGCAAAGCGTATGGAAATTCAACGTAGTACAGAGTGGAGTTCATCATGCC
ATAAACCCTGACCCATACAGAGGTGTTTTCGGTTCTGATGGTGAGAAGTATGCGAAGGAC
GTTGAAGATCTTATCCTATTTGGAACATCTGGAAGGGTTGCTGCTTTTATGTCTGAAGCT
ATACAGGGTGTTGGTGGGATAGTTGAATTGGCTCCAGGTTACTTGCCTGCTGCATACAGC
GCTGTACGAAAAGCTGGAGGCCTTTGTATTGCAGATGAGGTTCAATCTGGATTTGCTCGC
ACTGGAAGCCACTTCTGGGGATTTGAGAACCAAGGAGTGGTTCCCGACATAGTGACAATG
GCAAAAGGCATTGGAAATGGAATACCCCTTGGAGCTGTGGTAACGACTCCTGAGATTGCA
GAGGTCTTGTGCCATAGTAATTATTTCAACACATTTGGTGGAAATCCTGTTTGTACTTCT
GCAGGACTTGCTGTCCTTAGAGTGATTGAAAAAGAAAACCTTCAAGAAAATGCTCATGTT
GTTGGTTCCTACTTGAAAGAGCGCCTTATGGCTATCAAAAATAAGCATGAAATTGTTGGT
GATGTGAGGGGAAGAGGACTGCTTCTAGGTGTTGAACTAGTGACTGACCGCAAACTGAAA
ACTCCTGCTAAAGCTGAAACTCTTCATATCATGGACAAGATGAAAGAAATGGGAGTACTA
GTTGGCAAGGGTGGATTCCGTGGAAATGTCTTCAGAATTACTCCTCCACTTTGTTTCACT
AAAGAAGATGCAGATTTCGTGGCGGATGTGATGGATTGTGCAATGTCAAAGATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400021041
PEP Infomation

pacid=37478121 transcript=PGSC0003DMT400030976 locus=PGSC0003DMG400011868 ID=PGSC0003DMT400030976.v4.03 annot-version=v4.03
Sequence

MQRFVTARAKWVGELRGLSQRCYSQFGLASQKDDDMIINPRMPHFDYSPPPYNGPSADEI
LSKRKEFLSPSMFYFYEKNPLHLVHGKMQYLFDSNGRRYLDAFGGIATVSCGHCHPDVVE
AIVNQTKRLQHSTILYLNNAITDFAEALASKLPGDLKVVFFTNSGTEANELAIMMARLYT
GCHDIISLRNAYHGNAAATMSTTGQSVWKFNVVQSGVHHAINPDPYRGVFGSDGEKYAKD
VEDLILFGTSGRVAAFMSEAIQGVGGIVELAPGYLPAAYSAVRKAGGLCIADEVQSGFAR
TGSHFWGFENQGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLCHSNYFNTFGGNPVCTS
AGLAVLRVIEKENLQENAHVVGSYLKERLMAIKNKHEIVGDVRGRGLLLGVELVTDRKLK
TPAKAETLHIMDKMKEMGVLVGKGGFRGNVFRITPPLCFTKEDADFVADVMDCAMSKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400030976
Transcript Infomation

pacid=37478121 locus=PGSC0003DMG400011868 ID=PGSC0003DMT400030976.v4.03 annot-version=v4.03
Sequence

ATGCAGAGGTTTGTAACAGCAAGGGCAAAATGGGTAGGAGAGTTGCGAGGTTTATCGCAG
CGTTGTTATTCTCAATTTGGCTTAGCATCCCAAAAGGACGATGATATGATCATCAATCCT
CGGATGCCGCACTTCGACTACTCTCCGCCGCCGTACAATGGACCCTCCGCCGATGAAATT
TTGAGCAAACGGAAGGAATTTCTTAGCCCTTCTATGTTTTACTTCTATGAAAAAAACCCG
CTGCATTTGGTACATGGAAAGATGCAATACTTATTTGACAGCAATGGACGTCGATATCTT
GATGCATTTGGAGGAATTGCAACTGTATCTTGTGGACACTGCCACCCTGATGTGGTAGAG
GCCATCGTAAACCAAACCAAACGCTTACAGCACTCGACTATCTTATACCTCAATAACGCA
ATTACTGATTTTGCTGAGGCACTTGCTTCTAAGTTACCTGGTGATCTCAAGGTTGTGTTC
TTCACCAATTCCGGGACTGAGGCAAATGAGTTAGCAATTATGATGGCAAGATTATACACC
GGTTGTCATGATATCATTTCTCTAAGGAATGCTTACCATGGAAATGCAGCTGCCACTATG
AGCACCACTGGGCAAAGCGTATGGAAATTCAACGTAGTACAGAGTGGAGTTCATCATGCC
ATAAACCCTGACCCATACAGAGGTGTTTTCGGTTCTGATGGTGAGAAGTATGCGAAGGAC
GTTGAAGATCTTATCCTATTTGGAACATCTGGAAGGGTTGCTGCTTTTATGTCTGAAGCT
ATACAGGGTGTTGGTGGGATAGTTGAATTGGCTCCAGGTTACTTGCCTGCTGCATACAGC
GCTGTACGAAAAGCTGGAGGCCTTTGTATTGCAGATGAGGTTCAATCTGGATTTGCTCGC
ACTGGAAGCCACTTCTGGGGATTTGAGAACCAAGGAGTGGTTCCCGACATAGTGACAATG
GCAAAAGGCATTGGAAATGGAATACCCCTTGGAGCTGTGGTAACGACTCCTGAGATTGCA
GAGGTCTTGTGCCATAGTAATTATTTCAACACATTTGGTGGAAATCCTGTTTGTACTTCT
GCAGGACTTGCTGTCCTTAGAGTGATTGAAAAAGAAAACCTTCAAGAAAATGCTCATGTT
GTTGGTTCCTACTTGAAAGAGCGCCTTATGGCTATCAAAAATAAGCATGAAATTGTTGGT
GATGTGAGGGGAAGAGGACTGCTTCTAGGTGTTGAACTAGTGACTGACCGCAAACTGAAA
ACTCCTGCTAAAGCTGAAACTCTTCATATCATGGACAAGATGAAAGAAATGGGAGTACTA
GTTGGCAAGGGTGGATTCCGTGGAAATGTCTTCAGAATTACTCCTCCACTTTGTTTCACT
AAAGAAGATGCAGATTTCGTGGCGGATGTGATGGATTGTGCAATGTCAAAGATATAA