Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030947
CDS Infomation

pacid=37461058 polypeptide=PGSC0003DMP400021023 locus=PGSC0003DMG400011852 ID=PGSC0003DMT400030947.v4.03 annot-version=v4.03
Sequence

ATGGGGGTTGATTATTACAAAGTATTGGGTGTTGATAAGAACGCTACTGATGATGATTTG
AAGAAAGCTTATAGAAAACTCACCATGAAATGGCACCCTGATAAGAGCCCACAAAGCAAG
AAAGAAGCTGAAGCTGAAGCTAAGTTCAAACACATCTCTGAGGCTTATGATGTGCTTAGC
GACTCCCAGAAAAAAGCTGTGTATGACCAGTATGGTGAAGAAGGGCTGAAGGGTGGGGTA
CCACCACCTGGAGCTGGTGGCCCTGGTGCCGGTTCAACCTACTTTTCTACCGGGGAGGAT
ATGCTCCGTAAGCCAGAGAAGAAATCCAAGAAAAGCAATAAGAATGCTGCCACCGGTGGT
CTTGGGGGAGAGAGTGATGAGTGTGAGGTTAAGAGAGAGAAAAAAAGAGAAGGTGGAAAA
AATTCTGGAAAACCCAACAAAGTCAGTGATGAAGATGTTGTGAAATGTGTTGAGAAAGAG
AAAAAGAATAAGCTGAAGAAAAGCTGCTTGAATGAGCCTTTTGACACCAAAACTAGTGCT
CCTGCAAGTGCAACTGAAATGCGGGACAGTGACAAGGTAGTTGAGACCCTTGGTGAGGTC
TCTGGTGGAGATGTTGTGGACGAGATTAGAAGGAAGAAGAAATCCAAGAAAAACATTAAG
ACTACCAACGGTGTAGAAATGACAAACACTGATATTAAAGCTAAGAGTGATGACTCTTAC
ATCAAGAGAAAGAAAGAAAGAAAACATGGAAAACATTCTAGGAAGTTTAGTGAAGACAGC
GACGAGGTTGCTTCGAGAACTGTTGAAGGGAATAAAAGTAGGAAGTTGAAGAAAAGCTGC
GGGAATGAGCTGGAGAAAATGCATGATACTGAGGATATGCAGGAAGATGTTGCTGAAGTC
AATGAAGGTGATATTTCTTCACCTATAGAGATGGAAGAAAAAAACAAAACAGACAAAGGT
AATATCAAAAAGAGAAAAAGGGTAAACTTAGGACACAACTCTGAAGATCCTACACATGAG
AAGAGTGAAAAGAGAGAGAGATTTTCTGGTCAGGTTCAGATTTTCCCTTCATTGAATGAT
CCAAGTGATGAGAATCATGAGATCGAGGAAGAAAATTTACTGCGTGGCAAGCGATTCTCA
AAGCTAGAAGATGAAGTTGTCAAAGAAGCTGTTCATAAATACATTGAGATACATAACTTA
GGCGAAGAAGGGCTGAAAAAGGTTTTAAATTCTAGATCTTATCCTGAAATTAAGGGTTGC
TGGAAAGAAATAGGGAGAGCTATACCATACAGACCTTCTACTGCAGTTTACTCTCGTGGG
CAGATCCTGTTTCGAAGAAGTGAATCACGTAAATGGACTGAAGAGGAGTATGAGATGGTG
CTGAAGTTCCAGAAAGAGCATGGGAACAAATGGAGGGACTTAGCTGATGAACTTGGAAAA
CATCGGTGGCATGTGAAGGATACATGGCGAAGGCTAAAACATCAGAATAAAGGACAATGG
ACTCAGGAGGAATACCAGAATTTGTTTGATTTAGTAAACACCGATCTGAGACTGAAGCTT
TCTGAAGAGAAGAAATCTAAGCATGGGATGCTACGGGATAATATTGCATGGGGTGCAATA
AGTGAAAGCTTGTCCACGAGAATTGGTGCAAACTGCTGCTCAAAATGGTATGATCAATTA
ACATCACCCATGGTGGCCAAAGGTGAATGGGCGGATTCTGACGACTATCGCCTAGTTGAT
GCACTTTTTGAGCTCGACGCAAGCTGCATCAAGGATGTGGACTGGGACAATCTTCTTGAC
CACAGGGCTGGAGAGATATGTCGAAAGAGATGGAACCAAATGGTTCTTCACATAGGTCAA
CTTGGAAACATGTCATTTCCTGATCAAGTAGAAGTTCTAGCTAAGAGATACCGTCCGGAT
TTGATCCAAGTAAGAGAGGCTTGGGACAGTAAACCAGTCGTTCCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400021023
PEP Infomation

pacid=37461058 transcript=PGSC0003DMT400030947 locus=PGSC0003DMG400011852 ID=PGSC0003DMT400030947.v4.03 annot-version=v4.03
Sequence

MGVDYYKVLGVDKNATDDDLKKAYRKLTMKWHPDKSPQSKKEAEAEAKFKHISEAYDVLS
DSQKKAVYDQYGEEGLKGGVPPPGAGGPGAGSTYFSTGEDMLRKPEKKSKKSNKNAATGG
LGGESDECEVKREKKREGGKNSGKPNKVSDEDVVKCVEKEKKNKLKKSCLNEPFDTKTSA
PASATEMRDSDKVVETLGEVSGGDVVDEIRRKKKSKKNIKTTNGVEMTNTDIKAKSDDSY
IKRKKERKHGKHSRKFSEDSDEVASRTVEGNKSRKLKKSCGNELEKMHDTEDMQEDVAEV
NEGDISSPIEMEEKNKTDKGNIKKRKRVNLGHNSEDPTHEKSEKRERFSGQVQIFPSLND
PSDENHEIEEENLLRGKRFSKLEDEVVKEAVHKYIEIHNLGEEGLKKVLNSRSYPEIKGC
WKEIGRAIPYRPSTAVYSRGQILFRRSESRKWTEEEYEMVLKFQKEHGNKWRDLADELGK
HRWHVKDTWRRLKHQNKGQWTQEEYQNLFDLVNTDLRLKLSEEKKSKHGMLRDNIAWGAI
SESLSTRIGANCCSKWYDQLTSPMVAKGEWADSDDYRLVDALFELDASCIKDVDWDNLLD
HRAGEICRKRWNQMVLHIGQLGNMSFPDQVEVLAKRYRPDLIQVREAWDSKPVVP*

Transcript Sequence

Transcript ID

PGSC0003DMT400030947
Transcript Infomation

pacid=37461058 locus=PGSC0003DMG400011852 ID=PGSC0003DMT400030947.v4.03 annot-version=v4.03
Sequence

ATGGGGGTTGATTATTACAAAGTATTGGGTGTTGATAAGAACGCTACTGATGATGATTTG
AAGAAAGCTTATAGAAAACTCACCATGAAATGGCACCCTGATAAGAGCCCACAAAGCAAG
AAAGAAGCTGAAGCTGAAGCTAAGTTCAAACACATCTCTGAGGCTTATGATGTGCTTAGC
GACTCCCAGAAAAAAGCTGTGTATGACCAGTATGGTGAAGAAGGGCTGAAGGGTGGGGTA
CCACCACCTGGAGCTGGTGGCCCTGGTGCCGGTTCAACCTACTTTTCTACCGGGGAGGAT
ATGCTCCGTAAGCCAGAGAAGAAATCCAAGAAAAGCAATAAGAATGCTGCCACCGGTGGT
CTTGGGGGAGAGAGTGATGAGTGTGAGGTTAAGAGAGAGAAAAAAAGAGAAGGTGGAAAA
AATTCTGGAAAACCCAACAAAGTCAGTGATGAAGATGTTGTGAAATGTGTTGAGAAAGAG
AAAAAGAATAAGCTGAAGAAAAGCTGCTTGAATGAGCCTTTTGACACCAAAACTAGTGCT
CCTGCAAGTGCAACTGAAATGCGGGACAGTGACAAGGTAGTTGAGACCCTTGGTGAGGTC
TCTGGTGGAGATGTTGTGGACGAGATTAGAAGGAAGAAGAAATCCAAGAAAAACATTAAG
ACTACCAACGGTGTAGAAATGACAAACACTGATATTAAAGCTAAGAGTGATGACTCTTAC
ATCAAGAGAAAGAAAGAAAGAAAACATGGAAAACATTCTAGGAAGTTTAGTGAAGACAGC
GACGAGGTTGCTTCGAGAACTGTTGAAGGGAATAAAAGTAGGAAGTTGAAGAAAAGCTGC
GGGAATGAGCTGGAGAAAATGCATGATACTGAGGATATGCAGGAAGATGTTGCTGAAGTC
AATGAAGGTGATATTTCTTCACCTATAGAGATGGAAGAAAAAAACAAAACAGACAAAGGT
AATATCAAAAAGAGAAAAAGGGTAAACTTAGGACACAACTCTGAAGATCCTACACATGAG
AAGAGTGAAAAGAGAGAGAGATTTTCTGGTCAGGTTCAGATTTTCCCTTCATTGAATGAT
CCAAGTGATGAGAATCATGAGATCGAGGAAGAAAATTTACTGCGTGGCAAGCGATTCTCA
AAGCTAGAAGATGAAGTTGTCAAAGAAGCTGTTCATAAATACATTGAGATACATAACTTA
GGCGAAGAAGGGCTGAAAAAGGTTTTAAATTCTAGATCTTATCCTGAAATTAAGGGTTGC
TGGAAAGAAATAGGGAGAGCTATACCATACAGACCTTCTACTGCAGTTTACTCTCGTGGG
CAGATCCTGTTTCGAAGAAGTGAATCACGTAAATGGACTGAAGAGGAGTATGAGATGGTG
CTGAAGTTCCAGAAAGAGCATGGGAACAAATGGAGGGACTTAGCTGATGAACTTGGAAAA
CATCGGTGGCATGTGAAGGATACATGGCGAAGGCTAAAACATCAGAATAAAGGACAATGG
ACTCAGGAGGAATACCAGAATTTGTTTGATTTAGTAAACACCGATCTGAGACTGAAGCTT
TCTGAAGAGAAGAAATCTAAGCATGGGATGCTACGGGATAATATTGCATGGGGTGCAATA
AGTGAAAGCTTGTCCACGAGAATTGGTGCAAACTGCTGCTCAAAATGGTATGATCAATTA
ACATCACCCATGGTGGCCAAAGGTGAATGGGCGGATTCTGACGACTATCGCCTAGTTGAT
GCACTTTTTGAGCTCGACGCAAGCTGCATCAAGGATGTGGACTGGGACAATCTTCTTGAC
CACAGGGCTGGAGAGATATGTCGAAAGAGATGGAACCAAATGGTTCTTCACATAGGTCAA
CTTGGAAACATGTCATTTCCTGATCAAGTAGAAGTTCTAGCTAAGAGATACCGTCCGGAT
TTGATCCAAGTAAGAGAGGCTTGGGACAGTAAACCAGTCGTTCCATGA