Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030913
CDS Infomation

pacid=37433325 polypeptide=PGSC0003DMP400021001 locus=PGSC0003DMG400011839 ID=PGSC0003DMT400030913.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTAATTTATCTTTGGAAGATATCAAGAATGAGCAAATTGACCTTGAAAACATT
CCAGTGGAGGAAGTGTTCCAGCAGCTAAAATGTAGCAAAGAGGGATTGTCATCTGCTGAG
GGCCAAAAAAGGGTTGAAATTTTTGGCCCCAACAAACTTGAAGAGAAAAAAGATAACAAG
CTTCTCAAGTTCTTGGGATTCATGTGGAATCCTCTCTCATGGGTTATGGAGTGTGCTGCT
ATCATGGCTATTGTGTTGGCCAATGGAGGAGGCAAGCCACCAGATTGGCCAGATTTCGTT
GGTATCACAGTATTGCTCATTATCAACTCTACCATCAGTTTTATTGAAGAAAACAGTGCA
GGAAATGCTGCATCTGCCCTTATGGCTAATCTTGCTCCCAAAACTAAGATTTTGAGAGAT
GGAAAATGGTCAGAAGAGGAGGCCTCAATCTTGGTTCCAGGTGATATAATTAGCATTAAG
TTGGGAGATATCGTCCCAGCTGATGCTCGTCTTCTCGAGGGTGATCCTTTAAAGGTTGAT
CAGGCTGCACTCACCGGTGAGTCATTGCCCGCCACAAAGTTCCCTGGTGCTGAGGTTTTC
TCTGGTTCCACTGTCAAGCAAGGAGAAATTGAGGCAATTGTCATTGCCACTGGTGTTCAC
ACTTTCTTTGGAAAGGCTGCTCATCTTGTAGACAGCACAAACAATGTTGGCCATTTCCAG
AAGGTGTTGACAGCCATTGGAAACTTCTGTATCTGCTCTATTGCTGTGGGAATGGTGATT
GAGATAGTAGTGATGTACCCAATTCAGAAGCGTAACTACAGAGATGGAATCGACAACTTG
CTTGTGTTGCTCATCGGAGGTATCCCAATTGCCATGCCAACAGTCTTATCTGTGACCATG
GCTATTGGATCTCATAGGCTTGCACAACAAGGTGCCATTACTAAGAGGATGACTGCTATT
GAGGAAATGGCTGGTATGGATGTTCTTTGCAGTGACAAAACCGGTACCCTCACCCTCAAC
AAGCTCACTGTTGACAAAAACTTAATTGAGGTTTTCCCTAAAGATGCAGACAAGGATACT
GTTATGTTGCTTGGTGCTAGGGCTTCCAGGATCGAAAACCAGGATGCTATTGATACTTGT
ATCGTTAACATGTTGGGTGATCCTAAGGAGGCAAGAGCAGGCATCCAAGAGGTTCACTTC
TTGCCTTTCAATCCAGTTGAAAAGCGTACAGCCATTACCTATATCGATGACAAAGGAAAC
TGGCACAGGGCTAGCAAAGGAGCTCCCGAGCAAATTATTGAACTTTGTGAGCTCAAGGGA
GATATCAAGAAGAAGGCCTTAGAAATCATTGACGACTATGCCAACCGTGGCCTTCGTTCT
TTGGGTTTGGCAAGACAGACTGTACCTGAGAAGAACAAGGAAAGTGAAGGCTCACCTTGG
GAGTTTGTTGGCCTTTTGCCCCTTTTTGATCCTCCAAGGCACGACAGTGCTGAAACTATC
CGCAAAGCTCTTGAACTTGGGGTTGCTGTCAAGATGATCACTGGTGACCAGCTTGCCATC
GGTAAGGAAACTGCACGTAGGCTTGGCATGGGAACCAACATGTATCCTTCTTCAGCTCTT
CTTGGAGAGCACAAGGATGCAGCCATTGCTTCAATTCCCGTCGATGAGCTAATTGAAAAG
GCAGATGGTTTTGCTGGAGTCTTCCCAGAGCATAAATACGAGATCGTGAAGAAGCTCCAA
GATATGAAACACATTTGTGGTATGACGGGAGATGGAGTGAATGATGCACCAGCACTCAAG
AAGGCAGACATTGGTATTGCTGTGGATGACGCAACAGACGCTGCTAGAAGTGCATCTGAT
ATCGTCTTGACTGAGCCAGGTCTTAGTGTCATCGTGAGTGCTGTGCTAACAAGCAGAGCC
ATCTTCCAGAGGATGAAGAACTACACAATCTATGCAGTTTCCATCACAATCCGTGTTGTG
ATGGGATTCATGCTCATTGCCCTTATCTGGAAGTTCGACTTCTCTCCCTTTATGGTCCTT
ATCATTGCCATACTCAATGACGGAACCATCATGACCATCTCTAAGGACAGGGTTGTGCCA
TCTCCATTGCCCGACTCATGGAAACTGAATGAAATCTTTGCCACTGGTGTTGTCCTCGGA
ACCTACCAAGCTATCATGACTGTTGTGTTCTTCTACCTTGCAGCTGACACTGATTTCTTC
ACTGAAAACTTCCATGTTCGATCAATCAGAAACTCTCCAAATGAGCTTACAGCTGCACTT
TACCTTCAAGTGAGTATCATCAGTCAAGCTCTCATCTTCGTGACCAGGTCACGAAGCTGG
TCCTTTGTGGAACGCCCTGGCCTTATGCTCGTAGGAGCTTTCTTTGCAGCCCAATTGGTT
GCTACAGTGCTTGCTGTATATGCAGACTGGGAATTCGCCAGGATCAAGGGAGTTGGCTGG
GGATGGGCAGCAGTCATCTGGGTCTACACTATTATTACCTACTTACCTCAAGATGTTCTT
AAATTCATCATCCGTTTCGGCTTGAGTGGAAGGGCATGGGACACAATGATCCAAAACAAG
ACTGCCTTCACAACCAAGAAGGACTATGGAAGGGGTGAGAGGGAAGCACAATGGGCTCTA
GCGCAACGTACACTTCATGGTCTCCAGACACCTGAAGCCGCTGGCCTATTCAACGACAAG
AACTACAGGGAACTGTCTGAGATTGCTGAACAAGCTAAACGTCGTGCTGAAGTTGCAAGG
CTGAGGGAGCTCCACACACTTAAGGGACATGTTGAATCAGTTGTCAAGCTAAAGGGACTA
GATATTGAAACCATTCAACAACACTATACTGTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021001
PEP Infomation

pacid=37433325 transcript=PGSC0003DMT400030913 locus=PGSC0003DMG400011839 ID=PGSC0003DMT400030913.v4.03 annot-version=v4.03
Sequence

MASNLSLEDIKNEQIDLENIPVEEVFQQLKCSKEGLSSAEGQKRVEIFGPNKLEEKKDNK
LLKFLGFMWNPLSWVMECAAIMAIVLANGGGKPPDWPDFVGITVLLIINSTISFIEENSA
GNAASALMANLAPKTKILRDGKWSEEEASILVPGDIISIKLGDIVPADARLLEGDPLKVD
QAALTGESLPATKFPGAEVFSGSTVKQGEIEAIVIATGVHTFFGKAAHLVDSTNNVGHFQ
KVLTAIGNFCICSIAVGMVIEIVVMYPIQKRNYRDGIDNLLVLLIGGIPIAMPTVLSVTM
AIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFPKDADKDT
VMLLGARASRIENQDAIDTCIVNMLGDPKEARAGIQEVHFLPFNPVEKRTAITYIDDKGN
WHRASKGAPEQIIELCELKGDIKKKALEIIDDYANRGLRSLGLARQTVPEKNKESEGSPW
EFVGLLPLFDPPRHDSAETIRKALELGVAVKMITGDQLAIGKETARRLGMGTNMYPSSAL
LGEHKDAAIASIPVDELIEKADGFAGVFPEHKYEIVKKLQDMKHICGMTGDGVNDAPALK
KADIGIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRVV
MGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVVPSPLPDSWKLNEIFATGVVLG
TYQAIMTVVFFYLAADTDFFTENFHVRSIRNSPNELTAALYLQVSIISQALIFVTRSRSW
SFVERPGLMLVGAFFAAQLVATVLAVYADWEFARIKGVGWGWAAVIWVYTIITYLPQDVL
KFIIRFGLSGRAWDTMIQNKTAFTTKKDYGRGEREAQWALAQRTLHGLQTPEAAGLFNDK
NYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV*

Transcript Sequence

Transcript ID

PGSC0003DMT400030913
Transcript Infomation

pacid=37433325 locus=PGSC0003DMG400011839 ID=PGSC0003DMT400030913.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTAATTTATCTTTGGAAGATATCAAGAATGAGCAAATTGACCTTGAAAACATT
CCAGTGGAGGAAGTGTTCCAGCAGCTAAAATGTAGCAAAGAGGGATTGTCATCTGCTGAG
GGCCAAAAAAGGGTTGAAATTTTTGGCCCCAACAAACTTGAAGAGAAAAAAGATAACAAG
CTTCTCAAGTTCTTGGGATTCATGTGGAATCCTCTCTCATGGGTTATGGAGTGTGCTGCT
ATCATGGCTATTGTGTTGGCCAATGGAGGAGGCAAGCCACCAGATTGGCCAGATTTCGTT
GGTATCACAGTATTGCTCATTATCAACTCTACCATCAGTTTTATTGAAGAAAACAGTGCA
GGAAATGCTGCATCTGCCCTTATGGCTAATCTTGCTCCCAAAACTAAGATTTTGAGAGAT
GGAAAATGGTCAGAAGAGGAGGCCTCAATCTTGGTTCCAGGTGATATAATTAGCATTAAG
TTGGGAGATATCGTCCCAGCTGATGCTCGTCTTCTCGAGGGTGATCCTTTAAAGGTTGAT
CAGGCTGCACTCACCGGTGAGTCATTGCCCGCCACAAAGTTCCCTGGTGCTGAGGTTTTC
TCTGGTTCCACTGTCAAGCAAGGAGAAATTGAGGCAATTGTCATTGCCACTGGTGTTCAC
ACTTTCTTTGGAAAGGCTGCTCATCTTGTAGACAGCACAAACAATGTTGGCCATTTCCAG
AAGGTGTTGACAGCCATTGGAAACTTCTGTATCTGCTCTATTGCTGTGGGAATGGTGATT
GAGATAGTAGTGATGTACCCAATTCAGAAGCGTAACTACAGAGATGGAATCGACAACTTG
CTTGTGTTGCTCATCGGAGGTATCCCAATTGCCATGCCAACAGTCTTATCTGTGACCATG
GCTATTGGATCTCATAGGCTTGCACAACAAGGTGCCATTACTAAGAGGATGACTGCTATT
GAGGAAATGGCTGGTATGGATGTTCTTTGCAGTGACAAAACCGGTACCCTCACCCTCAAC
AAGCTCACTGTTGACAAAAACTTAATTGAGGTTTTCCCTAAAGATGCAGACAAGGATACT
GTTATGTTGCTTGGTGCTAGGGCTTCCAGGATCGAAAACCAGGATGCTATTGATACTTGT
ATCGTTAACATGTTGGGTGATCCTAAGGAGGCAAGAGCAGGCATCCAAGAGGTTCACTTC
TTGCCTTTCAATCCAGTTGAAAAGCGTACAGCCATTACCTATATCGATGACAAAGGAAAC
TGGCACAGGGCTAGCAAAGGAGCTCCCGAGCAAATTATTGAACTTTGTGAGCTCAAGGGA
GATATCAAGAAGAAGGCCTTAGAAATCATTGACGACTATGCCAACCGTGGCCTTCGTTCT
TTGGGTTTGGCAAGACAGACTGTACCTGAGAAGAACAAGGAAAGTGAAGGCTCACCTTGG
GAGTTTGTTGGCCTTTTGCCCCTTTTTGATCCTCCAAGGCACGACAGTGCTGAAACTATC
CGCAAAGCTCTTGAACTTGGGGTTGCTGTCAAGATGATCACTGGTGACCAGCTTGCCATC
GGTAAGGAAACTGCACGTAGGCTTGGCATGGGAACCAACATGTATCCTTCTTCAGCTCTT
CTTGGAGAGCACAAGGATGCAGCCATTGCTTCAATTCCCGTCGATGAGCTAATTGAAAAG
GCAGATGGTTTTGCTGGAGTCTTCCCAGAGCATAAATACGAGATCGTGAAGAAGCTCCAA
GATATGAAACACATTTGTGGTATGACGGGAGATGGAGTGAATGATGCACCAGCACTCAAG
AAGGCAGACATTGGTATTGCTGTGGATGACGCAACAGACGCTGCTAGAAGTGCATCTGAT
ATCGTCTTGACTGAGCCAGGTCTTAGTGTCATCGTGAGTGCTGTGCTAACAAGCAGAGCC
ATCTTCCAGAGGATGAAGAACTACACAATCTATGCAGTTTCCATCACAATCCGTGTTGTG
ATGGGATTCATGCTCATTGCCCTTATCTGGAAGTTCGACTTCTCTCCCTTTATGGTCCTT
ATCATTGCCATACTCAATGACGGAACCATCATGACCATCTCTAAGGACAGGGTTGTGCCA
TCTCCATTGCCCGACTCATGGAAACTGAATGAAATCTTTGCCACTGGTGTTGTCCTCGGA
ACCTACCAAGCTATCATGACTGTTGTGTTCTTCTACCTTGCAGCTGACACTGATTTCTTC
ACTGAAAACTTCCATGTTCGATCAATCAGAAACTCTCCAAATGAGCTTACAGCTGCACTT
TACCTTCAAGTGAGTATCATCAGTCAAGCTCTCATCTTCGTGACCAGGTCACGAAGCTGG
TCCTTTGTGGAACGCCCTGGCCTTATGCTCGTAGGAGCTTTCTTTGCAGCCCAATTGGTT
GCTACAGTGCTTGCTGTATATGCAGACTGGGAATTCGCCAGGATCAAGGGAGTTGGCTGG
GGATGGGCAGCAGTCATCTGGGTCTACACTATTATTACCTACTTACCTCAAGATGTTCTT
AAATTCATCATCCGTTTCGGCTTGAGTGGAAGGGCATGGGACACAATGATCCAAAACAAG
ACTGCCTTCACAACCAAGAAGGACTATGGAAGGGGTGAGAGGGAAGCACAATGGGCTCTA
GCGCAACGTACACTTCATGGTCTCCAGACACCTGAAGCCGCTGGCCTATTCAACGACAAG
AACTACAGGGAACTGTCTGAGATTGCTGAACAAGCTAAACGTCGTGCTGAAGTTGCAAGG
CTGAGGGAGCTCCACACACTTAAGGGACATGTTGAATCAGTTGTCAAGCTAAAGGGACTA
GATATTGAAACCATTCAACAACACTATACTGTCTAA