Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030891
CDS Infomation

pacid=37431582 polypeptide=PGSC0003DMP400020986 locus=PGSC0003DMG400011834 ID=PGSC0003DMT400030891.v4.03 annot-version=v4.03
Sequence

ATGGCGCTTATAATCCAAAACCCATTTCTATTTTCTACAAAATTATCACAAAGTCGTGGC
CTTTTACACTGTTTTTCTGCTGTTTCACAAAAGCCCCTCAGATATGCTGTTCTTGGTGCT
GGATTTGCTGGATTGTCTGTGGCTTGGCATTTGTTGCAACAAAGTTCAGAGGAATCAAAT
CTTTGCATAGACATATACGATGAAGTTGGCATTGGTGGAGGTGCATCTGGAATGTCTGGT
GGACTCCTTCATCCCTATTCCCCCAAAGTTAAGCTTCTGTGGCGGGGAGAAGAGTGCTGG
AAAGAAAGTTTAAAGCTTCTAAATGTTGCTGAAGATGCTCGATCTTCCAAGTCCTTAGAC
ATGGTTATGCCCAAAACTGGGCTAAAAGAAGGCGACTTTATAGTCAGGAGAAGCGGACTC
GTGAGACCAGTGCTCTCTGTGAAGAATATGCACATGATGAATGATAATGCTCAAAACTGC
ATTGCCAGCTGCAGAATTGAGTCGATTCACAAGGATGCTGCACAGAAGCTTGTACCTGAT
TTGTGTGTGCCCCTGGACTTAGCCTTCCATATGCCTGAAGCCGTGAATGTTAATCCTCAG
AATTATCTTGAGGCTCTCTACTTAGCATGCAAAACTTTTGTGAAATCCAAGTGCAGTTTG
GGCATTTCATGTAAAGAGTTAAATTTGCACAAGGAATCAGTTCTTAATCTTCTAGAATTA
GCAGGTGATTATGATGCAGTGATCGTATGTCTAGGTTCTGGAGCAGCCTTTCTTCCTGAA
CTCTCTGGAAGGCTTCCTTTGAGAATGTGTAGGGGTGTTATTGCTCACTTGCAGCTCCCT
GATCACATCAGAGAGGATTATCCAGAAAACAGCCCCTCTATACTTTCAGATGCATGGCTT
GCTGTCCAAGGACCTCAAACATTGTATTTGGGGTCAACATGGGAATGGAAATCGAGGAAT
TTTTCGAGACACGTTCCCCAAGAAGAAGCCTCCAAAGCTCTTGCAGAGTTACTACCGAAG
GCATCTGCTGTATATCCAGCTATAAAGAATTGGACCGTAAAAGGAACATGTGCAGGGCTA
AGGGCAATGCCGCCACTCACTGCAGAAGGATCACTTCCACTCTTGGGTTGTGTAGATGAA
TTCATTGGCGGCCCAACAGAATGTAAGTACTGGTTATTTACAGGGCTTGGTTCCAGGGGT
TTGTTCTACCATGCTTTGCTTGGAAAACTGATGGCACAGGCTGTTCTTTCATGTAATGAA
GACTTGATCCCTTCTGAATTAACGTCATGGAAGCATCGAGTGAAGCAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400020986
PEP Infomation

pacid=37431582 transcript=PGSC0003DMT400030891 locus=PGSC0003DMG400011834 ID=PGSC0003DMT400030891.v4.03 annot-version=v4.03
Sequence

MALIIQNPFLFSTKLSQSRGLLHCFSAVSQKPLRYAVLGAGFAGLSVAWHLLQQSSEESN
LCIDIYDEVGIGGGASGMSGGLLHPYSPKVKLLWRGEECWKESLKLLNVAEDARSSKSLD
MVMPKTGLKEGDFIVRRSGLVRPVLSVKNMHMMNDNAQNCIASCRIESIHKDAAQKLVPD
LCVPLDLAFHMPEAVNVNPQNYLEALYLACKTFVKSKCSLGISCKELNLHKESVLNLLEL
AGDYDAVIVCLGSGAAFLPELSGRLPLRMCRGVIAHLQLPDHIREDYPENSPSILSDAWL
AVQGPQTLYLGSTWEWKSRNFSRHVPQEEASKALAELLPKASAVYPAIKNWTVKGTCAGL
RAMPPLTAEGSLPLLGCVDEFIGGPTECKYWLFTGLGSRGLFYHALLGKLMAQAVLSCNE
DLIPSELTSWKHRVKQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400030891
Transcript Infomation

pacid=37431582 locus=PGSC0003DMG400011834 ID=PGSC0003DMT400030891.v4.03 annot-version=v4.03
Sequence

ATGGCGCTTATAATCCAAAACCCATTTCTATTTTCTACAAAATTATCACAAAGTCGTGGC
CTTTTACACTGTTTTTCTGCTGTTTCACAAAAGCCCCTCAGATATGCTGTTCTTGGTGCT
GGATTTGCTGGATTGTCTGTGGCTTGGCATTTGTTGCAACAAAGTTCAGAGGAATCAAAT
CTTTGCATAGACATATACGATGAAGTTGGCATTGGTGGAGGTGCATCTGGAATGTCTGGT
GGACTCCTTCATCCCTATTCCCCCAAAGTTAAGCTTCTGTGGCGGGGAGAAGAGTGCTGG
AAAGAAAGTTTAAAGCTTCTAAATGTTGCTGAAGATGCTCGATCTTCCAAGTCCTTAGAC
ATGGTTATGCCCAAAACTGGGCTAAAAGAAGGCGACTTTATAGTCAGGAGAAGCGGACTC
GTGAGACCAGTGCTCTCTGTGAAGAATATGCACATGATGAATGATAATGCTCAAAACTGC
ATTGCCAGCTGCAGAATTGAGTCGATTCACAAGGATGCTGCACAGAAGCTTGTACCTGAT
TTGTGTGTGCCCCTGGACTTAGCCTTCCATATGCCTGAAGCCGTGAATGTTAATCCTCAG
AATTATCTTGAGGCTCTCTACTTAGCATGCAAAACTTTTGTGAAATCCAAGTGCAGTTTG
GGCATTTCATGTAAAGAGTTAAATTTGCACAAGGAATCAGTTCTTAATCTTCTAGAATTA
GCAGGTGATTATGATGCAGTGATCGTATGTCTAGGTTCTGGAGCAGCCTTTCTTCCTGAA
CTCTCTGGAAGGCTTCCTTTGAGAATGTGTAGGGGTGTTATTGCTCACTTGCAGCTCCCT
GATCACATCAGAGAGGATTATCCAGAAAACAGCCCCTCTATACTTTCAGATGCATGGCTT
GCTGTCCAAGGACCTCAAACATTGTATTTGGGGTCAACATGGGAATGGAAATCGAGGAAT
TTTTCGAGACACGTTCCCCAAGAAGAAGCCTCCAAAGCTCTTGCAGAGTTACTACCGAAG
GCATCTGCTGTATATCCAGCTATAAAGAATTGGACCGTAAAAGGAACATGTGCAGGGCTA
AGGGCAATGCCGCCACTCACTGCAGAAGGATCACTTCCACTCTTGGGTTGTGTAGATGAA
TTCATTGGCGGCCCAACAGAATGTAAGTACTGGTTATTTACAGGGCTTGGTTCCAGGGGT
TTGTTCTACCATGCTTTGCTTGGAAAACTGATGGCACAGGCTGTTCTTTCATGTAATGAA
GACTTGATCCCTTCTGAATTAACGTCATGGAAGCATCGAGTGAAGCAATAA