Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030857
CDS Infomation

pacid=37452997 polypeptide=PGSC0003DMP400020961 locus=PGSC0003DMG400011823 ID=PGSC0003DMT400030857.v4.03 annot-version=v4.03
Sequence

ATGGAGAATGACAGCGAGTCTAAGCCGTCAGTGATGATCACAAATGACGACGGAATTGAT
GCTCCCGGCTTGAGATCTCTTGTTCGCGTTCTTGTCTCCTCTAATCTCTTCAATGTCCTC
GTTTGTGCTCCCGATTCTGAAAAATCAGCTGTTAGCCATTGTGTCTCATGGCAACACCCT
CTTTCCGTCAAGAAGGTGGACATCAGTGGAGCAACAGCCTTTGCAGTTTCTGGAACCCCA
GCAGACTGCACTTCCATCGGGATCTCCAAAGTGCTCTTCCCCTTTGTACCTGATCTGGTT
GTCAGCGGTATTAATAAGGGTAGCAATTGCGGTTATCACATTGTTTACTCAGGGACAGTG
GCTGGTGCACGAGAGGCTTTCTTCAATGGTGTTCCTTCTGTCTCATTGTCATATGAATGG
GTTGCTGGAAAAAGCAAGGATGATGATTTCGTATTGGCCGCTGAAGCTTGCATGCCAATC
ATTACAGCTATATCGACTGAGATCAAGAATAATACTTATCCTCAAAATTGCTTTCTTAAC
ATAGATGTACCAGCTGATGTTGCCAATTGCAAGGGTTATCGTCTGACGAAGCAAGGCAAG
ACTATTTTCAAAATGGGATGGAGGCAAGTTGTTTCAGAAGCACAAGGAGGAAGAATGTTA
TCCACAATGACAATGGATTCATCAGCTAGTAAAGAGGCATCTGTGGAAGAGAGCACCTTA
AGCACAGGACAAGAACACCTAATATTTAAGAGAGAAGTTAGGGGAACACAAATGGATGAA
GGTGATAATGATTACTCTTTCCTTCGACAAGGATATATAACTGTTACACCCCTTGGCGCC
TTATCTCCTCCACCGATGGATGGAGTTGAATTCTTCGAAGGATGGCTGCCTGGTGTGCAC
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400020961
PEP Infomation

pacid=37452997 transcript=PGSC0003DMT400030857 locus=PGSC0003DMG400011823 ID=PGSC0003DMT400030857.v4.03 annot-version=v4.03
Sequence

MENDSESKPSVMITNDDGIDAPGLRSLVRVLVSSNLFNVLVCAPDSEKSAVSHCVSWQHP
LSVKKVDISGATAFAVSGTPADCTSIGISKVLFPFVPDLVVSGINKGSNCGYHIVYSGTV
AGAREAFFNGVPSVSLSYEWVAGKSKDDDFVLAAEACMPIITAISTEIKNNTYPQNCFLN
IDVPADVANCKGYRLTKQGKTIFKMGWRQVVSEAQGGRMLSTMTMDSSASKEASVEESTL
STGQEHLIFKREVRGTQMDEGDNDYSFLRQGYITVTPLGALSPPPMDGVEFFEGWLPGVH
*

Transcript Sequence

Transcript ID

PGSC0003DMT400030857
Transcript Infomation

pacid=37452997 locus=PGSC0003DMG400011823 ID=PGSC0003DMT400030857.v4.03 annot-version=v4.03
Sequence

ATGGAGAATGACAGCGAGTCTAAGCCGTCAGTGATGATCACAAATGACGACGGAATTGAT
GCTCCCGGCTTGAGATCTCTTGTTCGCGTTCTTGTCTCCTCTAATCTCTTCAATGTCCTC
GTTTGTGCTCCCGATTCTGAAAAATCAGCTGTTAGCCATTGTGTCTCATGGCAACACCCT
CTTTCCGTCAAGAAGGTGGACATCAGTGGAGCAACAGCCTTTGCAGTTTCTGGAACCCCA
GCAGACTGCACTTCCATCGGGATCTCCAAAGTGCTCTTCCCCTTTGTACCTGATCTGGTT
GTCAGCGGTATTAATAAGGGTAGCAATTGCGGTTATCACATTGTTTACTCAGGGACAGTG
GCTGGTGCACGAGAGGCTTTCTTCAATGGTGTTCCTTCTGTCTCATTGTCATATGAATGG
GTTGCTGGAAAAAGCAAGGATGATGATTTCGTATTGGCCGCTGAAGCTTGCATGCCAATC
ATTACAGCTATATCGACTGAGATCAAGAATAATACTTATCCTCAAAATTGCTTTCTTAAC
ATAGATGTACCAGCTGATGTTGCCAATTGCAAGGGTTATCGTCTGACGAAGCAAGGCAAG
ACTATTTTCAAAATGGGATGGAGGCAAGTTGTTTCAGAAGCACAAGGAGGAAGAATGTTA
TCCACAATGACAATGGATTCATCAGCTAGTAAAGAGGCATCTGTGGAAGAGAGCACCTTA
AGCACAGGACAAGAACACCTAATATTTAAGAGAGAAGTTAGGGGAACACAAATGGATGAA
GGTGATAATGATTACTCTTTCCTTCGACAAGGATATATAACTGTTACACCCCTTGGCGCC
TTATCTCCTCCACCGATGGATGGAGTTGAATTCTTCGAAGGATGGCTGCCTGGTGTGCAC
TAG