Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030810
CDS Infomation

pacid=37428716 polypeptide=PGSC0003DMP400020924 locus=PGSC0003DMG400011805 ID=PGSC0003DMT400030810.v4.03 annot-version=v4.03
Sequence

ATGGGCACAGCTAATATAAGGGATATTTTGACTTGTTTTAGTCCTTCGCTGGACTTCTTT
GCTATAAGCTCTGGTGATGGCCGTATCAAGATATGGGATACTGTGAAGGGTCAGGTACAG
ACCGAGTTTGCAGATATTGTGTCAATGGAGACAGAAAGCTTGTTTAATAAGCCAGGAGGT
CATCTTTCAATGGATTATACTTGCATGAAGTGGTTATCATGTGACAGAAAGAAAAAAAGG
AAGATTGGAACTTCATTGTTGGTGTTAGGTACAGGAAGTGGTGATGTTTTGGCTCTAGAT
GTATCTGCAGGTCATCTGAAATGGAGATTTAGTGATTGCCATCCTGGCGGTGTCAACGCC
ATCTCATTCCCTTCACACGGTTCATTCATTTACACGGCTGGTGCTGATGGACTAGTTTGC
AAAATTGACTCCATGTCCGGGAATTTACTGCATAAGTTTAAAGCTTCCACTAAAGCAATA
TCATCTTTATCCATTTCATCAGATGGGAAAATATTAGCAACAGCAACTTCTCAGTTGAAG
GTTTTCAATTGCTTGGATGACAAAAAGCTCCAGAAATTTACAGGCCACCCTGGGGCTGTC
CGGTGTGTGGTTTTCTCTGAAGATGGGAGACATGTTCTTTCTTCTGCTGTTGGTGACCGA
CATGTAGCAGTTTGGAAGTTAGATGGTAGCAAAAAGAAATCAGCATGCTGCTCGCTGGCA
ATGGATCACCCTGCTGTCTTCTTGGATAGCTACAACATTAAATCTGGAGCTGAAAATGAT
GCAGGCTTGGGTGTTTTGGCCATTTCAGAAATTGGTGTTTGCTACTTTTGGCATGGAAAG
AGCTTTGAGGAATTGCACAATAGGAAGCCCACAAAGATATGTGCATCTTTAGATGAGAAA
ATAATGAAGAAACATAAAGAAACCATGCATAGTATTTTTTCAGCAAAATTGCAATCTATT
GGCACATCTGGTTCTGGCCATATGTTTGTTGCATATGGCTTGCTTATAAAACCATCATTT
GAAAAAGTTATGGTGCAGCCTGGGGAGGATATCAGATTAAAAAGTTCACTGGACGGGATC
CTTCTACCCTTCAGTCAATCTCGCAAATCTAAACAAGCGTCCAACACCCAGAGTCAGGTT
ACTGCTCTCGATCGTGCAAATGCAGAGGGTGCGTTACTTCCTTTGCCCATGATTCTTGAT
CATATTGGCGTGGAGACTGGAATTAAGCCCACAGTTAGCAAAGATGTCATTGGTAAACAA
GCAGAAGATGAGGTCACAATTTGCATGGAGGACCAGTTAAGATCCTTGGGTATAATTAGC
AGCGACAATGATCTCTTGCCTCCCTCAATTCTTGATGCTAAGATTTTGAAAAGAATAAGT
GCTGATGCTAGTGTGCCACAAAAGAAGATGAAAGCAGCTGTTTTATCCATGGAACCACAT
GATGCTTACAACTTTTTGAAAGCCTTGGTGGCTGCATGGCAGTCTAGATCAAGCTTGGGA
ACACATGTTCTTCCATGGATATGCTGTATATTGGTGAACCACAATGAATTTGTTACATCG
CAGGAACCACTGACGCCTCTTCTAGATTCCATGAACAAGCTTACCAAGTCAAAGGGGGTA
GCCCTCAACTCATTATTGCAGTTATCTGGCCGTTTGCAACTCGTAATGGCACAGATTGAG
AAGGCTGATAATAAGAAAAGTCCGACATTAACACTCGAGGGGCAGATGAATGATAGTGAG
GATGATGAGGTAGATGAAGTTATGTATGGCATAGATGAATCTCAAACGAGCAGTGACGGG
GATGACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400020924
PEP Infomation

pacid=37428716 transcript=PGSC0003DMT400030810 locus=PGSC0003DMG400011805 ID=PGSC0003DMT400030810.v4.03 annot-version=v4.03
Sequence

MGTANIRDILTCFSPSLDFFAISSGDGRIKIWDTVKGQVQTEFADIVSMETESLFNKPGG
HLSMDYTCMKWLSCDRKKKRKIGTSLLVLGTGSGDVLALDVSAGHLKWRFSDCHPGGVNA
ISFPSHGSFIYTAGADGLVCKIDSMSGNLLHKFKASTKAISSLSISSDGKILATATSQLK
VFNCLDDKKLQKFTGHPGAVRCVVFSEDGRHVLSSAVGDRHVAVWKLDGSKKKSACCSLA
MDHPAVFLDSYNIKSGAENDAGLGVLAISEIGVCYFWHGKSFEELHNRKPTKICASLDEK
IMKKHKETMHSIFSAKLQSIGTSGSGHMFVAYGLLIKPSFEKVMVQPGEDIRLKSSLDGI
LLPFSQSRKSKQASNTQSQVTALDRANAEGALLPLPMILDHIGVETGIKPTVSKDVIGKQ
AEDEVTICMEDQLRSLGIISSDNDLLPPSILDAKILKRISADASVPQKKMKAAVLSMEPH
DAYNFLKALVAAWQSRSSLGTHVLPWICCILVNHNEFVTSQEPLTPLLDSMNKLTKSKGV
ALNSLLQLSGRLQLVMAQIEKADNKKSPTLTLEGQMNDSEDDEVDEVMYGIDESQTSSDG
DD*

Transcript Sequence

Transcript ID

PGSC0003DMT400030810
Transcript Infomation

pacid=37428716 locus=PGSC0003DMG400011805 ID=PGSC0003DMT400030810.v4.03 annot-version=v4.03
Sequence

ATGGGCACAGCTAATATAAGGGATATTTTGACTTGTTTTAGTCCTTCGCTGGACTTCTTT
GCTATAAGCTCTGGTGATGGCCGTATCAAGATATGGGATACTGTGAAGGGTCAGGTACAG
ACCGAGTTTGCAGATATTGTGTCAATGGAGACAGAAAGCTTGTTTAATAAGCCAGGAGGT
CATCTTTCAATGGATTATACTTGCATGAAGTGGTTATCATGTGACAGAAAGAAAAAAAGG
AAGATTGGAACTTCATTGTTGGTGTTAGGTACAGGAAGTGGTGATGTTTTGGCTCTAGAT
GTATCTGCAGGTCATCTGAAATGGAGATTTAGTGATTGCCATCCTGGCGGTGTCAACGCC
ATCTCATTCCCTTCACACGGTTCATTCATTTACACGGCTGGTGCTGATGGACTAGTTTGC
AAAATTGACTCCATGTCCGGGAATTTACTGCATAAGTTTAAAGCTTCCACTAAAGCAATA
TCATCTTTATCCATTTCATCAGATGGGAAAATATTAGCAACAGCAACTTCTCAGTTGAAG
GTTTTCAATTGCTTGGATGACAAAAAGCTCCAGAAATTTACAGGCCACCCTGGGGCTGTC
CGGTGTGTGGTTTTCTCTGAAGATGGGAGACATGTTCTTTCTTCTGCTGTTGGTGACCGA
CATGTAGCAGTTTGGAAGTTAGATGGTAGCAAAAAGAAATCAGCATGCTGCTCGCTGGCA
ATGGATCACCCTGCTGTCTTCTTGGATAGCTACAACATTAAATCTGGAGCTGAAAATGAT
GCAGGCTTGGGTGTTTTGGCCATTTCAGAAATTGGTGTTTGCTACTTTTGGCATGGAAAG
AGCTTTGAGGAATTGCACAATAGGAAGCCCACAAAGATATGTGCATCTTTAGATGAGAAA
ATAATGAAGAAACATAAAGAAACCATGCATAGTATTTTTTCAGCAAAATTGCAATCTATT
GGCACATCTGGTTCTGGCCATATGTTTGTTGCATATGGCTTGCTTATAAAACCATCATTT
GAAAAAGTTATGGTGCAGCCTGGGGAGGATATCAGATTAAAAAGTTCACTGGACGGGATC
CTTCTACCCTTCAGTCAATCTCGCAAATCTAAACAAGCGTCCAACACCCAGAGTCAGGTT
ACTGCTCTCGATCGTGCAAATGCAGAGGGTGCGTTACTTCCTTTGCCCATGATTCTTGAT
CATATTGGCGTGGAGACTGGAATTAAGCCCACAGTTAGCAAAGATGTCATTGGTAAACAA
GCAGAAGATGAGGTCACAATTTGCATGGAGGACCAGTTAAGATCCTTGGGTATAATTAGC
AGCGACAATGATCTCTTGCCTCCCTCAATTCTTGATGCTAAGATTTTGAAAAGAATAAGT
GCTGATGCTAGTGTGCCACAAAAGAAGATGAAAGCAGCTGTTTTATCCATGGAACCACAT
GATGCTTACAACTTTTTGAAAGCCTTGGTGGCTGCATGGCAGTCTAGATCAAGCTTGGGA
ACACATGTTCTTCCATGGATATGCTGTATATTGGTGAACCACAATGAATTTGTTACATCG
CAGGAACCACTGACGCCTCTTCTAGATTCCATGAACAAGCTTACCAAGTCAAAGGGGGTA
GCCCTCAACTCATTATTGCAGTTATCTGGCCGTTTGCAACTCGTAATGGCACAGATTGAG
AAGGCTGATAATAAGAAAAGTCCGACATTAACACTCGAGGGGCAGATGAATGATAGTGAG
GATGATGAGGTAGATGAAGTTATGTATGGCATAGATGAATCTCAAACGAGCAGTGACGGG
GATGACTAG