Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030799
CDS Infomation

pacid=37428606 polypeptide=PGSC0003DMP400020915 locus=PGSC0003DMG400011801 ID=PGSC0003DMT400030799.v4.03 annot-version=v4.03
Sequence

ATGGCAGATGTTCAGGCTCCCATTCGCCCTAAGAGGAAGAAAAACATTATGGACCTTCTT
GTCCAGTTCAGATGGATCGTCGTTATCTTCGTCGTCCTTCCTCTCTCTTTCCTGTATTAT
TTCTCTATATATCTTGGGGATGTTAGATCTGAGTGCAAATCATACAAGCAGCGCCAGAAG
GAGCATGATGAAAATGTTAAAAAGGTTGTGAAGCGTCTTAAGGATAGGAATGCATCTAAG
GATGGTCTTGTCTGCACAGCTAGAAAGCCCTGGGTTGCTGTTGGAATGAGAAATGTGGAC
TACAAGCGTGCTCGTCATTTTGAAGTTGATCTTTCTCCATTTAGAAATGTTCTTAACATT
GACACGGAGCGAATGATTGCTAAAGTCGAGCCTCTAGTCAATATGGGCCAAATCTCTAGA
GTTACTGTCCCTATGAATGTTTCCCTCGCAGTTGTTGCTGAGCTTGATGATCTAACCGTT
GGTGGTCTGATCAACGGCTATGGGATTGAAGGAAGTTCTCACATTTATGGACTGTTCTCA
GACACTGTTGTGTCATATGAAGTTGTTCTAGCAGACGGGCAGGTAGTTAGAGCTACAAAG
GACAATGAATATTCTGATCTTTTCTATGCTATTCCATGGTCTCAAGGGACTCTGGGGCTT
CTGGTTTCAGCTGAGATCAAGCTCATTCCAATCAAGGAATACATGAAACTTACCTACAAA
CCTGTAGTTGGTAATTTGAAAGAGATTGCTCAGGCTTATATAGATTCTTTTTCACCTAAA
GATGGGGATCAGGATAACCGTGAAAAAGTTCCGGACTTTGTAGAAACCATGGTGTACACT
CCCACAGAAGCTGTTTGCATGACTGGTAGATATGCTTCAAAAGAAGAGGCCAAGAAGAAG
GGCAATGTGATCAACAATGTTGGTTGGTGGTTCAAAACCTGGTTTTACCAGCACGCTCAA
ACTGCACTCAAGAAGGGGGAATTCGTGGAGTACATTCCAACTAGGGAATACTACCACAGG
CACACAAGATGCTTGTATTGGGAAGGGAAACTTATCCTTCCATTCGGTGATCAGTGGTGG
TTTAGGTTTTTCTTTGGATGGGCCATGCCTCCCAAGGTTTCTCTACTTAAAGCCACTCAA
GGTGAATACATTAGGAACTATTACCATGAAAACCATGTCATTCAGGATATGCTTGTTCCT
CTTTACAAGGTTGGCGATGCTCTTGAGTGGGTCAACCGTGAGATGGAGGTGTATCCCCTC
TGGCTCTGCCCCCACAGACTCTACAGGCTGCCTCTTAAAACAATGGTGTACCCTGAACCA
GGTTTTGAGCTGCACAAGAGGCAGGGTGACACAAAATATGCTCAAATGTACACTGATGTT
GGTGTCTACTATGCTCCTGGACCTATTTTGAGGGGTGAGGTCTTTGATGGTATAGAGGCA
GTCCGTAAGTTGGAGAGTTGGTTGATTGAAAACCATGGATTCCAGCCACAATACGCTGTC
TCTGAGCTGACGGAAAAGAACTTCTGGAGGATGTTTGATGGAAGCCTATACGAGAACTGC
AGAAAAAAGTACAGAGCCATCGGAACCTTCATGAGTGTGTACTATAAGTCTAAGAAAGGA
AAGAAGACCGAGAAGGAGGTGCAGGACGCTGAGCAAGAGACTGCTGAAGTTGAGACCCCA
GAAGTTGATGAGCCTGAAGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400020915
PEP Infomation

pacid=37428606 transcript=PGSC0003DMT400030799 locus=PGSC0003DMG400011801 ID=PGSC0003DMT400030799.v4.03 annot-version=v4.03
Sequence

MADVQAPIRPKRKKNIMDLLVQFRWIVVIFVVLPLSFLYYFSIYLGDVRSECKSYKQRQK
EHDENVKKVVKRLKDRNASKDGLVCTARKPWVAVGMRNVDYKRARHFEVDLSPFRNVLNI
DTERMIAKVEPLVNMGQISRVTVPMNVSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFS
DTVVSYEVVLADGQVVRATKDNEYSDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTYK
PVVGNLKEIAQAYIDSFSPKDGDQDNREKVPDFVETMVYTPTEAVCMTGRYASKEEAKKK
GNVINNVGWWFKTWFYQHAQTALKKGEFVEYIPTREYYHRHTRCLYWEGKLILPFGDQWW
FRFFFGWAMPPKVSLLKATQGEYIRNYYHENHVIQDMLVPLYKVGDALEWVNREMEVYPL
WLCPHRLYRLPLKTMVYPEPGFELHKRQGDTKYAQMYTDVGVYYAPGPILRGEVFDGIEA
VRKLESWLIENHGFQPQYAVSELTEKNFWRMFDGSLYENCRKKYRAIGTFMSVYYKSKKG
KKTEKEVQDAEQETAEVETPEVDEPED*

Transcript Sequence

Transcript ID

PGSC0003DMT400030799
Transcript Infomation

pacid=37428606 locus=PGSC0003DMG400011801 ID=PGSC0003DMT400030799.v4.03 annot-version=v4.03
Sequence

ATGGCAGATGTTCAGGCTCCCATTCGCCCTAAGAGGAAGAAAAACATTATGGACCTTCTT
GTCCAGTTCAGATGGATCGTCGTTATCTTCGTCGTCCTTCCTCTCTCTTTCCTGTATTAT
TTCTCTATATATCTTGGGGATGTTAGATCTGAGTGCAAATCATACAAGCAGCGCCAGAAG
GAGCATGATGAAAATGTTAAAAAGGTTGTGAAGCGTCTTAAGGATAGGAATGCATCTAAG
GATGGTCTTGTCTGCACAGCTAGAAAGCCCTGGGTTGCTGTTGGAATGAGAAATGTGGAC
TACAAGCGTGCTCGTCATTTTGAAGTTGATCTTTCTCCATTTAGAAATGTTCTTAACATT
GACACGGAGCGAATGATTGCTAAAGTCGAGCCTCTAGTCAATATGGGCCAAATCTCTAGA
GTTACTGTCCCTATGAATGTTTCCCTCGCAGTTGTTGCTGAGCTTGATGATCTAACCGTT
GGTGGTCTGATCAACGGCTATGGGATTGAAGGAAGTTCTCACATTTATGGACTGTTCTCA
GACACTGTTGTGTCATATGAAGTTGTTCTAGCAGACGGGCAGGTAGTTAGAGCTACAAAG
GACAATGAATATTCTGATCTTTTCTATGCTATTCCATGGTCTCAAGGGACTCTGGGGCTT
CTGGTTTCAGCTGAGATCAAGCTCATTCCAATCAAGGAATACATGAAACTTACCTACAAA
CCTGTAGTTGGTAATTTGAAAGAGATTGCTCAGGCTTATATAGATTCTTTTTCACCTAAA
GATGGGGATCAGGATAACCGTGAAAAAGTTCCGGACTTTGTAGAAACCATGGTGTACACT
CCCACAGAAGCTGTTTGCATGACTGGTAGATATGCTTCAAAAGAAGAGGCCAAGAAGAAG
GGCAATGTGATCAACAATGTTGGTTGGTGGTTCAAAACCTGGTTTTACCAGCACGCTCAA
ACTGCACTCAAGAAGGGGGAATTCGTGGAGTACATTCCAACTAGGGAATACTACCACAGG
CACACAAGATGCTTGTATTGGGAAGGGAAACTTATCCTTCCATTCGGTGATCAGTGGTGG
TTTAGGTTTTTCTTTGGATGGGCCATGCCTCCCAAGGTTTCTCTACTTAAAGCCACTCAA
GGTGAATACATTAGGAACTATTACCATGAAAACCATGTCATTCAGGATATGCTTGTTCCT
CTTTACAAGGTTGGCGATGCTCTTGAGTGGGTCAACCGTGAGATGGAGGTGTATCCCCTC
TGGCTCTGCCCCCACAGACTCTACAGGCTGCCTCTTAAAACAATGGTGTACCCTGAACCA
GGTTTTGAGCTGCACAAGAGGCAGGGTGACACAAAATATGCTCAAATGTACACTGATGTT
GGTGTCTACTATGCTCCTGGACCTATTTTGAGGGGTGAGGTCTTTGATGGTATAGAGGCA
GTCCGTAAGTTGGAGAGTTGGTTGATTGAAAACCATGGATTCCAGCCACAATACGCTGTC
TCTGAGCTGACGGAAAAGAACTTCTGGAGGATGTTTGATGGAAGCCTATACGAGAACTGC
AGAAAAAAGTACAGAGCCATCGGAACCTTCATGAGTGTGTACTATAAGTCTAAGAAAGGA
AAGAAGACCGAGAAGGAGGTGCAGGACGCTGAGCAAGAGACTGCTGAAGTTGAGACCCCA
GAAGTTGATGAGCCTGAAGATTGA