Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030740
CDS Infomation

pacid=37452545 polypeptide=PGSC0003DMP400020870 locus=PGSC0003DMG400011776 ID=PGSC0003DMT400030740.v4.03 annot-version=v4.03
Sequence

ATGACTACTATTCCGGTTATTGATTTTTCAAAACTTGATGGAGAGGAAAGAGCCCAAACT
TTGGCTCAAATTTCCAAAGGTTGTGAAGAATGGGGATTCTTTCAGTTGGTGAATCATGGG
ATTCCAGTGGAGTTGTTAGAAAGGGTGAAGAAGGTGGGTGGAGAATGCTTTAAGTTGGAA
AGAGAAGAAGTTTTCAACAAGTCAAGAGCAGTCAATTTGCTTAATGAGTTTGTGGAAAGC
AATAAAAATGGCAAAGTTGAAAATGTGGATTGGGAAGATGTATTCCTTCTAACTGATGAT
AATCATAATCAATGGCCCTCCAACACTCCTCAATTCAAGGAAACAATGAATGAGTATAGA
TCAGAGGTGAAAAAGCTAGCAGAAAGAGTGTTGGAAGTAATGGATGAAAATTTAGGTTTA
TCAAAAGGTTACATCAAGAAAGCCTTCAATAACAATAATAATGGTGCATTTTTTGGTACA
AAAGTGAGCCATTACCCACCATGTCCACATCCAGAAAAGGTGAATGGTCTTAGAGCTCAC
ACTGATGCTGGTGGTGTCATTTTGCTCTTTCAAGATGATCAAGTCGATGGTCTTCAAATC
CTCAAAGACGGACAATGGATCGATGTACCTCCTATCCCCAACGCCATTGTGATCAACACA
GGTGATCAAATCGAAGTGCTTAGCAATGGGAAATACAAGAGCGTTTGGCACCGTGTCTTG
TCAAAACCAGATGGGAATAGGAGATCCATTGCTTCATTCTATAATCCTTCATTGAAAGCC
ACTATTTCTCCAGCACCAGAGCTACTAATTTTGGAGGAAAAAAAAGTGGATCAATTAATT
GCTACTTATCCAACTTTTGTGTTTGGGAATTACATGAATGTTTATAATGAGCAAAAGTTC
CTTCCTAAAGAGCCAAGGTTTCAAGCTGTGGCTGCAATCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400020870
PEP Infomation

pacid=37452545 transcript=PGSC0003DMT400030740 locus=PGSC0003DMG400011776 ID=PGSC0003DMT400030740.v4.03 annot-version=v4.03
Sequence

MTTIPVIDFSKLDGEERAQTLAQISKGCEEWGFFQLVNHGIPVELLERVKKVGGECFKLE
REEVFNKSRAVNLLNEFVESNKNGKVENVDWEDVFLLTDDNHNQWPSNTPQFKETMNEYR
SEVKKLAERVLEVMDENLGLSKGYIKKAFNNNNNGAFFGTKVSHYPPCPHPEKVNGLRAH
TDAGGVILLFQDDQVDGLQILKDGQWIDVPPIPNAIVINTGDQIEVLSNGKYKSVWHRVL
SKPDGNRRSIASFYNPSLKATISPAPELLILEEKKVDQLIATYPTFVFGNYMNVYNEQKF
LPKEPRFQAVAAI*

Transcript Sequence

Transcript ID

PGSC0003DMT400030740
Transcript Infomation

pacid=37452545 locus=PGSC0003DMG400011776 ID=PGSC0003DMT400030740.v4.03 annot-version=v4.03
Sequence

ATGACTACTATTCCGGTTATTGATTTTTCAAAACTTGATGGAGAGGAAAGAGCCCAAACT
TTGGCTCAAATTTCCAAAGGTTGTGAAGAATGGGGATTCTTTCAGTTGGTGAATCATGGG
ATTCCAGTGGAGTTGTTAGAAAGGGTGAAGAAGGTGGGTGGAGAATGCTTTAAGTTGGAA
AGAGAAGAAGTTTTCAACAAGTCAAGAGCAGTCAATTTGCTTAATGAGTTTGTGGAAAGC
AATAAAAATGGCAAAGTTGAAAATGTGGATTGGGAAGATGTATTCCTTCTAACTGATGAT
AATCATAATCAATGGCCCTCCAACACTCCTCAATTCAAGGAAACAATGAATGAGTATAGA
TCAGAGGTGAAAAAGCTAGCAGAAAGAGTGTTGGAAGTAATGGATGAAAATTTAGGTTTA
TCAAAAGGTTACATCAAGAAAGCCTTCAATAACAATAATAATGGTGCATTTTTTGGTACA
AAAGTGAGCCATTACCCACCATGTCCACATCCAGAAAAGGTGAATGGTCTTAGAGCTCAC
ACTGATGCTGGTGGTGTCATTTTGCTCTTTCAAGATGATCAAGTCGATGGTCTTCAAATC
CTCAAAGACGGACAATGGATCGATGTACCTCCTATCCCCAACGCCATTGTGATCAACACA
GGTGATCAAATCGAAGTGCTTAGCAATGGGAAATACAAGAGCGTTTGGCACCGTGTCTTG
TCAAAACCAGATGGGAATAGGAGATCCATTGCTTCATTCTATAATCCTTCATTGAAAGCC
ACTATTTCTCCAGCACCAGAGCTACTAATTTTGGAGGAAAAAAAAGTGGATCAATTAATT
GCTACTTATCCAACTTTTGTGTTTGGGAATTACATGAATGTTTATAATGAGCAAAAGTTC
CTTCCTAAAGAGCCAAGGTTTCAAGCTGTGGCTGCAATCTGA