Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030670
CDS Infomation

pacid=37433341 polypeptide=PGSC0003DMP400020829 locus=PGSC0003DMG400011749 ID=PGSC0003DMT400030670.v4.03 annot-version=v4.03
Sequence

ATGGTAGCAACCTGCAACAATGGCGAAATCCTCCATGTTCTTTTCCTTCCCTTCTTATCC
GCTGGTCATTTCATCCCATTAGTTAACGCCGCAAGGCTATTCGCCTCCCGCGGTGTTAAA
GCCACAATCCTCACTACCCCTCATAATGCCTTACTTTTCAAATCTACTATTGACGATGAT
GTTCGAATTTCCGGATTTCCCATTTCTATCGTAACTATTAAATTCCCCTCTGCTGAAGTT
GGGTTGCCTGAAGGAATTGAGAGCTTTAACTCTGCCACTTCACCTGAAATGCCCCATAAA
ATTTTTTATGCTCTTTCTCTTCTACAAAAGCCAATGGAAGATAAAATTCGTGAACTCCGT
CCTGATTGCATTTTTTCTGATATGTACTTCCCTTGGACAGTAGATATTGCTGATGAGCTT
CACATCCCTCGTATTTTGTACAATTTGTCTGCTTACATGTGCTACAGCATTATGCACAAC
CTTAAGCTTTACAGACCTCACAAGCAGCCTAATCTAGACGAATCTCAAAGTTTCGTGGTT
CCTGGTTTACCTGATGAGATGAAGTTCAAGTTATCCCAACTGACAGATGATCTGAGAAAA
CCGGATGACCAAAAGACTGGTTTTGACGAATTGCTCGATAAAGTACGAGATTCGGAGGAA
CGAAGCTATGGCATTGTTCATGATACATTTTATGAGCTAGAACCTGCATATGTCGACTAC
TACCAGAAATTAAAGAAACCAAAATGTTGGCATTTTGGTCCGCTCTCTCATTTTGCATCC
AAAATCCGTAGTAAGGAGCTAATTGCTGAGCATAACAACAATGAGATTGTTGTAGATTGG
TTGAATGCACAGAAACCTAAATCGGTTCTCTATGTATCTTTCGGAAGCATGGCTAGATTT
CCTGAGAGCCAACTGAATGAAATATCCCAAGCTCTGGATGCTTCAAATGTTCCTTTCATT
TTTGTATTGAGGCCTAATGAAGAAACGGCGTCGTGGTTGCCAGTTGGTAATTTAGAGGAC
AAGACTAAAAAGGGTTTGTACATCAAAGGGTGGGTCCCACAGCTTACGATCATGGAACAT
TCAGCAACAGGCGGGTTCATGACTCATTGTGGTACTAATTCGGTTCTGGAAGCCATCACT
TTTGGCGTGCCAATGATAACATGGCCACTTTATGCTGATCAATTCTACAACGAGAAGGTA
GTCGAGGTTAGGGGATTGGGAATCAAAATCGGGATAGATGTATGGAATGATGGGATTGAG
ATCACGGGCCCTGTAATAGAAAGCGCCAAGATTAGAGAAGCAATTGAGAGACTAATGATC
AGTAATGGTTCTGAGGAAATTATGAATATTAGGGATAGAGTAATGGCTATGAGCAAAATG
GCTCAGAATGCAACAAATGAAGGTGGATCTTCATGGAACAATCTCACTGCTCTCATTCAA
CATATCAAGAATTTTAATCTTAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400020829
PEP Infomation

pacid=37433341 transcript=PGSC0003DMT400030670 locus=PGSC0003DMG400011749 ID=PGSC0003DMT400030670.v4.03 annot-version=v4.03
Sequence

MVATCNNGEILHVLFLPFLSAGHFIPLVNAARLFASRGVKATILTTPHNALLFKSTIDDD
VRISGFPISIVTIKFPSAEVGLPEGIESFNSATSPEMPHKIFYALSLLQKPMEDKIRELR
PDCIFSDMYFPWTVDIADELHIPRILYNLSAYMCYSIMHNLKLYRPHKQPNLDESQSFVV
PGLPDEMKFKLSQLTDDLRKPDDQKTGFDELLDKVRDSEERSYGIVHDTFYELEPAYVDY
YQKLKKPKCWHFGPLSHFASKIRSKELIAEHNNNEIVVDWLNAQKPKSVLYVSFGSMARF
PESQLNEISQALDASNVPFIFVLRPNEETASWLPVGNLEDKTKKGLYIKGWVPQLTIMEH
SATGGFMTHCGTNSVLEAITFGVPMITWPLYADQFYNEKVVEVRGLGIKIGIDVWNDGIE
ITGPVIESAKIREAIERLMISNGSEEIMNIRDRVMAMSKMAQNATNEGGSSWNNLTALIQ
HIKNFNLN*

Transcript Sequence

Transcript ID

PGSC0003DMT400030670
Transcript Infomation

pacid=37433341 locus=PGSC0003DMG400011749 ID=PGSC0003DMT400030670.v4.03 annot-version=v4.03
Sequence

ATGGTAGCAACCTGCAACAATGGCGAAATCCTCCATGTTCTTTTCCTTCCCTTCTTATCC
GCTGGTCATTTCATCCCATTAGTTAACGCCGCAAGGCTATTCGCCTCCCGCGGTGTTAAA
GCCACAATCCTCACTACCCCTCATAATGCCTTACTTTTCAAATCTACTATTGACGATGAT
GTTCGAATTTCCGGATTTCCCATTTCTATCGTAACTATTAAATTCCCCTCTGCTGAAGTT
GGGTTGCCTGAAGGAATTGAGAGCTTTAACTCTGCCACTTCACCTGAAATGCCCCATAAA
ATTTTTTATGCTCTTTCTCTTCTACAAAAGCCAATGGAAGATAAAATTCGTGAACTCCGT
CCTGATTGCATTTTTTCTGATATGTACTTCCCTTGGACAGTAGATATTGCTGATGAGCTT
CACATCCCTCGTATTTTGTACAATTTGTCTGCTTACATGTGCTACAGCATTATGCACAAC
CTTAAGCTTTACAGACCTCACAAGCAGCCTAATCTAGACGAATCTCAAAGTTTCGTGGTT
CCTGGTTTACCTGATGAGATGAAGTTCAAGTTATCCCAACTGACAGATGATCTGAGAAAA
CCGGATGACCAAAAGACTGGTTTTGACGAATTGCTCGATAAAGTACGAGATTCGGAGGAA
CGAAGCTATGGCATTGTTCATGATACATTTTATGAGCTAGAACCTGCATATGTCGACTAC
TACCAGAAATTAAAGAAACCAAAATGTTGGCATTTTGGTCCGCTCTCTCATTTTGCATCC
AAAATCCGTAGTAAGGAGCTAATTGCTGAGCATAACAACAATGAGATTGTTGTAGATTGG
TTGAATGCACAGAAACCTAAATCGGTTCTCTATGTATCTTTCGGAAGCATGGCTAGATTT
CCTGAGAGCCAACTGAATGAAATATCCCAAGCTCTGGATGCTTCAAATGTTCCTTTCATT
TTTGTATTGAGGCCTAATGAAGAAACGGCGTCGTGGTTGCCAGTTGGTAATTTAGAGGAC
AAGACTAAAAAGGGTTTGTACATCAAAGGGTGGGTCCCACAGCTTACGATCATGGAACAT
TCAGCAACAGGCGGGTTCATGACTCATTGTGGTACTAATTCGGTTCTGGAAGCCATCACT
TTTGGCGTGCCAATGATAACATGGCCACTTTATGCTGATCAATTCTACAACGAGAAGGTA
GTCGAGGTTAGGGGATTGGGAATCAAAATCGGGATAGATGTATGGAATGATGGGATTGAG
ATCACGGGCCCTGTAATAGAAAGCGCCAAGATTAGAGAAGCAATTGAGAGACTAATGATC
AGTAATGGTTCTGAGGAAATTATGAATATTAGGGATAGAGTAATGGCTATGAGCAAAATG
GCTCAGAATGCAACAAATGAAGGTGGATCTTCATGGAACAATCTCACTGCTCTCATTCAA
CATATCAAGAATTTTAATCTTAATTAG