Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030650
CDS Infomation

pacid=37431542 polypeptide=PGSC0003DMP400020813 locus=PGSC0003DMG400011740 ID=PGSC0003DMT400030650.v4.03 annot-version=v4.03
Sequence

ATGGCGATGGAACAGAATGAAGAAACTGCAATGCCGCATGTTGTGTTCATACCATACGCC
ATGACGAGTCATATAACTCCATTGGTACATATTGCTAGACTCTTCGCCCTCCATGGCCTC
AAAGTTACTATCATTGCCCCTCAGCATAATGCTCTTCTTTTTCAGTCCTCTGTCGATAGA
GACCGTCTCTTTTCGGGCAGCAATATTACTGTCCGGACAATTCAATTTCCGTCTGAGGAA
GTTGGATTACCTGTAGGAATTGAAAACTTCATCGCAAGCCCTTCTATGGAAATAGTTGGC
AAAGTTCACTATGGGTTTATTCTGCTCCAAAAGATTATGGAGCAACTAATTCGGGAGATC
AATCCAAACTGCATTGTTTCCGATATGTTCTTCCCTTGGACTGTTGATTTAGCTGAGGAG
ATGCAAATTCCGAGATTTTCTTTTCAACCAGCCACTTCCATACATCAATGTGCTTGGGTT
TTAATTAGGGAATTTAAACCTTACAAGAATGTGGCGTCGGATTCTGAAAGGTTTTTGATT
CCTGGTTTGCCTCTCGACATCAAAATGAAAGTCTCAGAGATTGAAGATTTTCTTAAAGAG
GAAACTGAGTACACAAAGACAGTAGATGACGTTTTACAAGCTGAGGTTCGTAGCCATGGT
ATTATTCATAACACTTGCTCTGAGCTGGAACCTGGCGTTGCCCAACTCTACGAAAAAGCT
AGAGGAGTAAAAGGGTGGCATATAGGTCCACTTGCTCTGTTTATCAACAAATATGAAGCG
GAAATTAGTTCTAAACAAATTTCCAATTCGAATATTAATTCATGTTCTGACCCTTGGAAA
GGGTACGGTGATTGTTTCAATTGGCTTGAAAATCAACAACCTAACTCCGTTCTCTTTGTT
TGCTTTGGAAGCATGATAAGATTTTCCGATGATCAGCTTAAGGAAATGGCTGTTGGATTG
AAGGCTGCCAACTGTCCAACTATTTGGGTTTTTAGGGAGCAGGACAAAAATGAAGTAGAC
GAGAAAGATGAGCATTCTGACTGGAGCCGTAATGGTTTCAAAGAAATGATTGGGGAAAAG
ATGTTTATCATCCAAGGCTGGGCACCACAACAATTAATCCTGAAACATCGAGCAATTGGT
GGATTCTTAACTCATTGTGGTTGGAACTCTATACTTGAGTCTCTAGCCATAGGTGTTCCA
TTGATCACATGGCCACTTTTCTCAGACAACTTCTATACCGACAAGCTTTTGGAGACACTT
GGCCTTGCTATTGGAATTGGAGCAGATGTGTGGAATCCGGGGTTTATATTATCGTGTCCA
CCCCTTTCAGGAGAGAAGATAGAGTTGGCCGTCAAGCGTTTAATGAATAATTCAGAGGAA
AGTAGAAAAATTAGAGAAAATGCAAAGTTGATGGCAAAGAAGCTCAAAAGTGCCACTGAA
GAAGGTGGTTCCTCTCATTCACAGCTCATCGGGTTAATTGAGGAGATCAAGCGTTGTGCT
TTCAAGAAATCCTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400020813
PEP Infomation

pacid=37431542 transcript=PGSC0003DMT400030650 locus=PGSC0003DMG400011740 ID=PGSC0003DMT400030650.v4.03 annot-version=v4.03
Sequence

MAMEQNEETAMPHVVFIPYAMTSHITPLVHIARLFALHGLKVTIIAPQHNALLFQSSVDR
DRLFSGSNITVRTIQFPSEEVGLPVGIENFIASPSMEIVGKVHYGFILLQKIMEQLIREI
NPNCIVSDMFFPWTVDLAEEMQIPRFSFQPATSIHQCAWVLIREFKPYKNVASDSERFLI
PGLPLDIKMKVSEIEDFLKEETEYTKTVDDVLQAEVRSHGIIHNTCSELEPGVAQLYEKA
RGVKGWHIGPLALFINKYEAEISSKQISNSNINSCSDPWKGYGDCFNWLENQQPNSVLFV
CFGSMIRFSDDQLKEMAVGLKAANCPTIWVFREQDKNEVDEKDEHSDWSRNGFKEMIGEK
MFIIQGWAPQQLILKHRAIGGFLTHCGWNSILESLAIGVPLITWPLFSDNFYTDKLLETL
GLAIGIGADVWNPGFILSCPPLSGEKIELAVKRLMNNSEESRKIRENAKLMAKKLKSATE
EGGSSHSQLIGLIEEIKRCAFKKSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400030650
Transcript Infomation

pacid=37431542 locus=PGSC0003DMG400011740 ID=PGSC0003DMT400030650.v4.03 annot-version=v4.03
Sequence

ATGGCGATGGAACAGAATGAAGAAACTGCAATGCCGCATGTTGTGTTCATACCATACGCC
ATGACGAGTCATATAACTCCATTGGTACATATTGCTAGACTCTTCGCCCTCCATGGCCTC
AAAGTTACTATCATTGCCCCTCAGCATAATGCTCTTCTTTTTCAGTCCTCTGTCGATAGA
GACCGTCTCTTTTCGGGCAGCAATATTACTGTCCGGACAATTCAATTTCCGTCTGAGGAA
GTTGGATTACCTGTAGGAATTGAAAACTTCATCGCAAGCCCTTCTATGGAAATAGTTGGC
AAAGTTCACTATGGGTTTATTCTGCTCCAAAAGATTATGGAGCAACTAATTCGGGAGATC
AATCCAAACTGCATTGTTTCCGATATGTTCTTCCCTTGGACTGTTGATTTAGCTGAGGAG
ATGCAAATTCCGAGATTTTCTTTTCAACCAGCCACTTCCATACATCAATGTGCTTGGGTT
TTAATTAGGGAATTTAAACCTTACAAGAATGTGGCGTCGGATTCTGAAAGGTTTTTGATT
CCTGGTTTGCCTCTCGACATCAAAATGAAAGTCTCAGAGATTGAAGATTTTCTTAAAGAG
GAAACTGAGTACACAAAGACAGTAGATGACGTTTTACAAGCTGAGGTTCGTAGCCATGGT
ATTATTCATAACACTTGCTCTGAGCTGGAACCTGGCGTTGCCCAACTCTACGAAAAAGCT
AGAGGAGTAAAAGGGTGGCATATAGGTCCACTTGCTCTGTTTATCAACAAATATGAAGCG
GAAATTAGTTCTAAACAAATTTCCAATTCGAATATTAATTCATGTTCTGACCCTTGGAAA
GGGTACGGTGATTGTTTCAATTGGCTTGAAAATCAACAACCTAACTCCGTTCTCTTTGTT
TGCTTTGGAAGCATGATAAGATTTTCCGATGATCAGCTTAAGGAAATGGCTGTTGGATTG
AAGGCTGCCAACTGTCCAACTATTTGGGTTTTTAGGGAGCAGGACAAAAATGAAGTAGAC
GAGAAAGATGAGCATTCTGACTGGAGCCGTAATGGTTTCAAAGAAATGATTGGGGAAAAG
ATGTTTATCATCCAAGGCTGGGCACCACAACAATTAATCCTGAAACATCGAGCAATTGGT
GGATTCTTAACTCATTGTGGTTGGAACTCTATACTTGAGTCTCTAGCCATAGGTGTTCCA
TTGATCACATGGCCACTTTTCTCAGACAACTTCTATACCGACAAGCTTTTGGAGACACTT
GGCCTTGCTATTGGAATTGGAGCAGATGTGTGGAATCCGGGGTTTATATTATCGTGTCCA
CCCCTTTCAGGAGAGAAGATAGAGTTGGCCGTCAAGCGTTTAATGAATAATTCAGAGGAA
AGTAGAAAAATTAGAGAAAATGCAAAGTTGATGGCAAAGAAGCTCAAAAGTGCCACTGAA
GAAGGTGGTTCCTCTCATTCACAGCTCATCGGGTTAATTGAGGAGATCAAGCGTTGTGCT
TTCAAGAAATCCTCTTGA