Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030622
CDS Infomation

pacid=37444576 polypeptide=PGSC0003DMP400020791 locus=PGSC0003DMG400011728 ID=PGSC0003DMT400030622.v4.03 annot-version=v4.03
Sequence

ATGATCTTGAAAACTTATATTTTCATCATTTTCACTACTCTTTTCCTTCACTGGGAAACC
TCAGAAACTAAATCTCAGGGCGATATTGGACGAGCCAGCTTGCCACCTAGGGGTTGGAAC
TCCTATGACTCATTTTGTTGGACCATCACCGAGGAAGAGTTTCTTCAGAATGCAGAACTC
GTAGCACAACGATTAAAACCTCATGGTTATGAGTATGTTGTGGTGGACTTTCTTTGGTAT
AGGAAGAAAACAATAGGTGCTTATACTGATTCTTATGGTTTTGATGTCTTTGATGAGTGG
GGAAGGATGGTTCCTGACCCTGGAAGATGGCCTTCCTCTCAAGGTGGAAAAGGGTTTTCT
GAAGTTGCCGGGAAGGTTCATAGCATGGGACTGAAATTTGGGATTCATGTAATGAGAGGT
TTAAGTCTACAAGCGTTTAATGCTAACACCCTCATACTGGATACCACTACGGGCAAAGCT
TATGAGGAGGCAGGTCGACAATGGCGTGCACAAGATATTGGAATTAAGGAGAGGACTTGT
GCATGGATGAAAAATGGTTTCATGAGTGTGAATACCAAGTTGGGAGCTGGAAGAGCATTC
CTTAGGTCGCTCTATCAACAATATGCTGACTGGGGTGTTGATTTTGTGAAACTTGACTGT
GTATTCGGTGATGACTTGGATTTAGATGAGATAATCGTTGTTTCAGAGGTATTGAATGAG
CTTAGCCGACCTATCATATATTCCTTGTCCCCTGGAACTAATGCAAAACCAATCATAGCG
AAGGAAGTTAGTGGGTTGGTCAATATGTATAGAGTAACTGGGGATGACTGGGATACTTGG
GAAGATGTCTCTGCTCACTTCAACGTTGCGAGGGACTTCACTGCTGCTAACTTAGTAGGA
GTCAAGGGCCTGAAGGGGAAATCGTGGCCTGACTTGGATATGCTACCACTTGGATGGCTA
ACAGAAGCAGGTTCAAATGATGGTCCACACAGATATTGCAGGCTTAATCTGGATGAGCAA
CGTACTCAGGTGACTCTATGGTCCATGGTCAGGTCCCCTCTCATCTTTGGTGGAGATATG
AGAAAGCTTGATGATGCTACATTCAGTCTTCTTACGAATCCTACTCTGTTGGAGATTAAC
TGGTTTAGCTCTAACAACATGGAGTTTCATTACGTGACAGGCTCCTTAAGTTCATCTGGA
AAACATAGCTTGAGTAACCATACTGAGGATAAAGAAAAAATAAATGTGTTGGAGACGAGA
GTTTTGGCTTTAAGGAGCTGCAAAGATGTAAAGGCAAATGGCTGGTCTACTAAAGTTCTT
GACAATAATGTAGAGAAAGTGTGCTGGGAAGAGAACTCAAATAAACGCAAGGCACCGTTT
TGTCTAAACAAGAGAGAAGCACTTTCAGCATCAGAAGGGGAGATGGTATATCAGCACCAA
AATCTCGGGAGACTTCACTTATTGGTAACAGAGAGAACAGAACTTTGTTTTGGTGCATCT
TCAAATAGAAAGCTTACAGCTAATGAGATCAGCAGAGGTTCATTTTCACGGTGCAGATCA
CATGCCAACCAGATGTGGGAGAACTACAATGGAACCCTCATGAATAGTTATTCCGGTCTT
TGTGCTATCATGGATTTTGTCAGAGCTTCTTCTGGTGGAATTAGGTCCTGGCTTGCAACT
GGAAGGAGAGGAGAGATCTATTTGGCTTTCTTCAATTTGAACAACCAGGTGACAAAAATG
TCAGCAAAGATATCAGACATAACCAACGCGATTCATGCTACAAGTTCAAAGTGCTCAGGC
ACAGAAGTGTGGAGTGGCACAAATCTTGGAGCCATAAAGGATTCAATATCTATGTCAGTA
AACGCTCACGGATGTGCATTGTTTGTCTTGAACTGCACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400020791
PEP Infomation

pacid=37444576 transcript=PGSC0003DMT400030622 locus=PGSC0003DMG400011728 ID=PGSC0003DMT400030622.v4.03 annot-version=v4.03
Sequence

MILKTYIFIIFTTLFLHWETSETKSQGDIGRASLPPRGWNSYDSFCWTITEEEFLQNAEL
VAQRLKPHGYEYVVVDFLWYRKKTIGAYTDSYGFDVFDEWGRMVPDPGRWPSSQGGKGFS
EVAGKVHSMGLKFGIHVMRGLSLQAFNANTLILDTTTGKAYEEAGRQWRAQDIGIKERTC
AWMKNGFMSVNTKLGAGRAFLRSLYQQYADWGVDFVKLDCVFGDDLDLDEIIVVSEVLNE
LSRPIIYSLSPGTNAKPIIAKEVSGLVNMYRVTGDDWDTWEDVSAHFNVARDFTAANLVG
VKGLKGKSWPDLDMLPLGWLTEAGSNDGPHRYCRLNLDEQRTQVTLWSMVRSPLIFGGDM
RKLDDATFSLLTNPTLLEINWFSSNNMEFHYVTGSLSSSGKHSLSNHTEDKEKINVLETR
VLALRSCKDVKANGWSTKVLDNNVEKVCWEENSNKRKAPFCLNKREALSASEGEMVYQHQ
NLGRLHLLVTERTELCFGASSNRKLTANEISRGSFSRCRSHANQMWENYNGTLMNSYSGL
CAIMDFVRASSGGIRSWLATGRRGEIYLAFFNLNNQVTKMSAKISDITNAIHATSSKCSG
TEVWSGTNLGAIKDSISMSVNAHGCALFVLNCT*

Transcript Sequence

Transcript ID

PGSC0003DMT400030622
Transcript Infomation

pacid=37444576 locus=PGSC0003DMG400011728 ID=PGSC0003DMT400030622.v4.03 annot-version=v4.03
Sequence

ATGATCTTGAAAACTTATATTTTCATCATTTTCACTACTCTTTTCCTTCACTGGGAAACC
TCAGAAACTAAATCTCAGGGCGATATTGGACGAGCCAGCTTGCCACCTAGGGGTTGGAAC
TCCTATGACTCATTTTGTTGGACCATCACCGAGGAAGAGTTTCTTCAGAATGCAGAACTC
GTAGCACAACGATTAAAACCTCATGGTTATGAGTATGTTGTGGTGGACTTTCTTTGGTAT
AGGAAGAAAACAATAGGTGCTTATACTGATTCTTATGGTTTTGATGTCTTTGATGAGTGG
GGAAGGATGGTTCCTGACCCTGGAAGATGGCCTTCCTCTCAAGGTGGAAAAGGGTTTTCT
GAAGTTGCCGGGAAGGTTCATAGCATGGGACTGAAATTTGGGATTCATGTAATGAGAGGT
TTAAGTCTACAAGCGTTTAATGCTAACACCCTCATACTGGATACCACTACGGGCAAAGCT
TATGAGGAGGCAGGTCGACAATGGCGTGCACAAGATATTGGAATTAAGGAGAGGACTTGT
GCATGGATGAAAAATGGTTTCATGAGTGTGAATACCAAGTTGGGAGCTGGAAGAGCATTC
CTTAGGTCGCTCTATCAACAATATGCTGACTGGGGTGTTGATTTTGTGAAACTTGACTGT
GTATTCGGTGATGACTTGGATTTAGATGAGATAATCGTTGTTTCAGAGGTATTGAATGAG
CTTAGCCGACCTATCATATATTCCTTGTCCCCTGGAACTAATGCAAAACCAATCATAGCG
AAGGAAGTTAGTGGGTTGGTCAATATGTATAGAGTAACTGGGGATGACTGGGATACTTGG
GAAGATGTCTCTGCTCACTTCAACGTTGCGAGGGACTTCACTGCTGCTAACTTAGTAGGA
GTCAAGGGCCTGAAGGGGAAATCGTGGCCTGACTTGGATATGCTACCACTTGGATGGCTA
ACAGAAGCAGGTTCAAATGATGGTCCACACAGATATTGCAGGCTTAATCTGGATGAGCAA
CGTACTCAGGTGACTCTATGGTCCATGGTCAGGTCCCCTCTCATCTTTGGTGGAGATATG
AGAAAGCTTGATGATGCTACATTCAGTCTTCTTACGAATCCTACTCTGTTGGAGATTAAC
TGGTTTAGCTCTAACAACATGGAGTTTCATTACGTGACAGGCTCCTTAAGTTCATCTGGA
AAACATAGCTTGAGTAACCATACTGAGGATAAAGAAAAAATAAATGTGTTGGAGACGAGA
GTTTTGGCTTTAAGGAGCTGCAAAGATGTAAAGGCAAATGGCTGGTCTACTAAAGTTCTT
GACAATAATGTAGAGAAAGTGTGCTGGGAAGAGAACTCAAATAAACGCAAGGCACCGTTT
TGTCTAAACAAGAGAGAAGCACTTTCAGCATCAGAAGGGGAGATGGTATATCAGCACCAA
AATCTCGGGAGACTTCACTTATTGGTAACAGAGAGAACAGAACTTTGTTTTGGTGCATCT
TCAAATAGAAAGCTTACAGCTAATGAGATCAGCAGAGGTTCATTTTCACGGTGCAGATCA
CATGCCAACCAGATGTGGGAGAACTACAATGGAACCCTCATGAATAGTTATTCCGGTCTT
TGTGCTATCATGGATTTTGTCAGAGCTTCTTCTGGTGGAATTAGGTCCTGGCTTGCAACT
GGAAGGAGAGGAGAGATCTATTTGGCTTTCTTCAATTTGAACAACCAGGTGACAAAAATG
TCAGCAAAGATATCAGACATAACCAACGCGATTCATGCTACAAGTTCAAAGTGCTCAGGC
ACAGAAGTGTGGAGTGGCACAAATCTTGGAGCCATAAAGGATTCAATATCTATGTCAGTA
AACGCTCACGGATGTGCATTGTTTGTCTTGAACTGCACATAA