Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030619
CDS Infomation

pacid=37443385 polypeptide=PGSC0003DMP400020788 locus=PGSC0003DMG400011727 ID=PGSC0003DMT400030619.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGCTACGCCACTCAAGCTCGATCGGAAACCGAGTTACAGCGTCACCTAGGAAG
CGAGACGACGTCACCGCTTCCTCATCTCCTTTGGTTCCTGACAGTGCTCCTAACGTTGAT
GATGACGATGATGATTATCGTGGTCGGTATCCTCGAGATCGGTTTCGTTCATTCTGCTCT
TCGCATCTTCAACCTCTTTTCCCTTTCTTCTTCCCTGATGAATCGAGGTCTCACCCTCAC
AAGTTCAAGATCTCGCTATTTCTGCTTGTTGTTCTCATACTTTCACTAGTCTTCCTGATT
TCCTCCGTCGTACATCGTTTGAATGCTCCATATTTGTGCAAAAAGGATGGTATAACTCTT
CAGTGTCCACCGGTGAAAGAACCTTCTTCCTTGTGGGAGAATCCTTATTCATCAACAACC
TCATGGAAGCCTTGTGCGGAGCGACGTGAGGGACTTAAATCAGATATTCCGCCCGAGAAT
GCCACAAACGGTTATATATTCATACATGCTGAGGGTGGCTTAAACCAGCAAAGGATCGCT
ATATGCAATGCTGTTGCAGTTGCCAAAATAATGAATGCCACCCTTATTTTGCCAGTATTA
AAGCAAGACCAGATATGGAAAGACCAAACGAAATTGGAGGACATATTTGATGTAGATCAT
TTTATTAACTACCTGAAGGATGATGTGCGAATTGTTCGCGATATCCCAGAGTGGTTTACT
GACAAAGCTGAGCTGTTCTCAAGCATAAGGCGTACAGTCAAGAACATTCCCAAGTACGCT
TCAGCAGAGTTCTACATAGATAATGTTTTGCCACGGGTCAAGGAGAAGAAGATAATGTCA
CTAAAACCTTTTGTTGATCGACTTGGGTATGATAATGTTCCTCCAGAGATAAACAAGCTG
AGGTGCAGGGTCAACTATCATGCTCTGAAGTTTCTTCCCGAGATTGAGCAGATGGCCGAT
CAACTTGTTTCGAGGATGAGAAATCGCACTGGTAGTTCAAATCCTTTCATGGCTCTTCAT
TTGAGATTTGAGAAAGGAATGGTGGGTCTGTCATTCTGTGATTTTGTTGGAACAAGGTCA
GAGAAAGATCTCATGGCTGCATACAGAAAGAAAGAATGGCCTCGGCGGTTTAAGGATGGT
TCCCATTTGTGGGCATTGGCGCTGCAAAAGCGTAAGGAAGGACGATGCCCTCTTGAGCCT
GGTGAAGTAGCCGTGCTGCTTCGGGCCATGGGTTATCCTAAAGAAACTCAAATATATGTT
GCTTCTGGACAGGTCTATGGTGGACAAAACCGCATGGCACCGCTGAGGAACATGTTCCCA
AATCTGGTTACAAAAGAGGAACTAGCTACAAAACCAGAATTGGATGGCTTCAGAAAGCAT
GTGACAAGCTTGGCAGCCCTCGACTTCCTAGTCTGTTTGAAGTCTGATGTATTTGTGATG
ACACACGGAGGAAACTTCGCCAAACTGATAATAGGACATCGTAGGTACATGGGTCATCGT
CTAAAATCCATTAAGCCAGACAAGGGTCTGATGTCCAAATCCCTAGGAGATCCATATATG
GGGTGGGCTTCCTTTGTGGAAGACGTTGTCATAACCCATCAGACTAGAACTGGTTTACCT
GAAGAAACGTTTCCAAATTATGATCTTTGGGAGAATCCTTTAACAAATTGCATGTGTAAA
GCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400020788
PEP Infomation

pacid=37443385 transcript=PGSC0003DMT400030619 locus=PGSC0003DMG400011727 ID=PGSC0003DMT400030619.v4.03 annot-version=v4.03
Sequence

MAELRHSSSIGNRVTASPRKRDDVTASSSPLVPDSAPNVDDDDDDYRGRYPRDRFRSFCS
SHLQPLFPFFFPDESRSHPHKFKISLFLLVVLILSLVFLISSVVHRLNAPYLCKKDGITL
QCPPVKEPSSLWENPYSSTTSWKPCAERREGLKSDIPPENATNGYIFIHAEGGLNQQRIA
ICNAVAVAKIMNATLILPVLKQDQIWKDQTKLEDIFDVDHFINYLKDDVRIVRDIPEWFT
DKAELFSSIRRTVKNIPKYASAEFYIDNVLPRVKEKKIMSLKPFVDRLGYDNVPPEINKL
RCRVNYHALKFLPEIEQMADQLVSRMRNRTGSSNPFMALHLRFEKGMVGLSFCDFVGTRS
EKDLMAAYRKKEWPRRFKDGSHLWALALQKRKEGRCPLEPGEVAVLLRAMGYPKETQIYV
ASGQVYGGQNRMAPLRNMFPNLVTKEELATKPELDGFRKHVTSLAALDFLVCLKSDVFVM
THGGNFAKLIIGHRRYMGHRLKSIKPDKGLMSKSLGDPYMGWASFVEDVVITHQTRTGLP
EETFPNYDLWENPLTNCMCKA*

Transcript Sequence

Transcript ID

PGSC0003DMT400030619
Transcript Infomation

pacid=37443385 locus=PGSC0003DMG400011727 ID=PGSC0003DMT400030619.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGCTACGCCACTCAAGCTCGATCGGAAACCGAGTTACAGCGTCACCTAGGAAG
CGAGACGACGTCACCGCTTCCTCATCTCCTTTGGTTCCTGACAGTGCTCCTAACGTTGAT
GATGACGATGATGATTATCGTGGTCGGTATCCTCGAGATCGGTTTCGTTCATTCTGCTCT
TCGCATCTTCAACCTCTTTTCCCTTTCTTCTTCCCTGATGAATCGAGGTCTCACCCTCAC
AAGTTCAAGATCTCGCTATTTCTGCTTGTTGTTCTCATACTTTCACTAGTCTTCCTGATT
TCCTCCGTCGTACATCGTTTGAATGCTCCATATTTGTGCAAAAAGGATGGTATAACTCTT
CAGTGTCCACCGGTGAAAGAACCTTCTTCCTTGTGGGAGAATCCTTATTCATCAACAACC
TCATGGAAGCCTTGTGCGGAGCGACGTGAGGGACTTAAATCAGATATTCCGCCCGAGAAT
GCCACAAACGGTTATATATTCATACATGCTGAGGGTGGCTTAAACCAGCAAAGGATCGCT
ATATGCAATGCTGTTGCAGTTGCCAAAATAATGAATGCCACCCTTATTTTGCCAGTATTA
AAGCAAGACCAGATATGGAAAGACCAAACGAAATTGGAGGACATATTTGATGTAGATCAT
TTTATTAACTACCTGAAGGATGATGTGCGAATTGTTCGCGATATCCCAGAGTGGTTTACT
GACAAAGCTGAGCTGTTCTCAAGCATAAGGCGTACAGTCAAGAACATTCCCAAGTACGCT
TCAGCAGAGTTCTACATAGATAATGTTTTGCCACGGGTCAAGGAGAAGAAGATAATGTCA
CTAAAACCTTTTGTTGATCGACTTGGGTATGATAATGTTCCTCCAGAGATAAACAAGCTG
AGGTGCAGGGTCAACTATCATGCTCTGAAGTTTCTTCCCGAGATTGAGCAGATGGCCGAT
CAACTTGTTTCGAGGATGAGAAATCGCACTGGTAGTTCAAATCCTTTCATGGCTCTTCAT
TTGAGATTTGAGAAAGGAATGGTGGGTCTGTCATTCTGTGATTTTGTTGGAACAAGGTCA
GAGAAAGATCTCATGGCTGCATACAGAAAGAAAGAATGGCCTCGGCGGTTTAAGGATGGT
TCCCATTTGTGGGCATTGGCGCTGCAAAAGCGTAAGGAAGGACGATGCCCTCTTGAGCCT
GGTGAAGTAGCCGTGCTGCTTCGGGCCATGGGTTATCCTAAAGAAACTCAAATATATGTT
GCTTCTGGACAGGTCTATGGTGGACAAAACCGCATGGCACCGCTGAGGAACATGTTCCCA
AATCTGGTTACAAAAGAGGAACTAGCTACAAAACCAGAATTGGATGGCTTCAGAAAGCAT
GTGACAAGCTTGGCAGCCCTCGACTTCCTAGTCTGTTTGAAGTCTGATGTATTTGTGATG
ACACACGGAGGAAACTTCGCCAAACTGATAATAGGACATCGTAGGTACATGGGTCATCGT
CTAAAATCCATTAAGCCAGACAAGGGTCTGATGTCCAAATCCCTAGGAGATCCATATATG
GGGTGGGCTTCCTTTGTGGAAGACGTTGTCATAACCCATCAGACTAGAACTGGTTTACCT
GAAGAAACGTTTCCAAATTATGATCTTTGGGAGAATCCTTTAACAAATTGCATGTGTAAA
GCCTGA