Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030611
CDS Infomation

pacid=37441866 polypeptide=PGSC0003DMP400020780 locus=PGSC0003DMG400011723 ID=PGSC0003DMT400030611.v4.03 annot-version=v4.03
Sequence

ATGTCGAACGCCGGTGAAGAAGATAACGATGATGTATTGAGCGACGTAGAGGCCGATGAT
CCGGTACCTATTGATATAATTAATTCTCCCTCACCAGAAGATGTCTCAATTGAGAAATTC
CGTGAGATTCTCGCCGAGCTGGATCGGGAGCGGCAAGCTCGATTAGCAGCTGAGGATTCT
AAATCGCAGTTGCAAGTTTCGTTCAACAGATTGAGAGTTCTCGCTCATGATGCGATCAAA
AAGCGGGATGAGCACTCGAGACAACGCGATGAAGCATTGCGGGAAAAGGAAGAAGCTTCG
ACAACAGTTGAAAAGGTAACGGAGGAATTGAAGGAAGTAACTAAGCAGAGAGATGAATTT
TCAAAGGAGTTAGAGGAATTGAAAAAGGCAAAAGATTCAATGAGAACTGAGATGGAAACT
TCAGGTTCAATGTTAGTTAGTGGAATTGATAAGATATCTGGAAAAGTTAGTCAATTTAAG
AATTTTGTAGCTGGTGGATTACCTAGGTCACAGAAATACACAGGATTACCAGCAGTGGCT
TATGGGGTGATCAAAAGGACGAATGACATTGTAGAGGAGCTATTGAGACAGATTGAATCA
ACAGGAAAGTCAAGAAATGAAGCCCGTGAACAAATGGACCATAGGAATTATGAAATTGCA
ATTGAAGTTTCACAGTTAGAGTCAACAATTAGTGGTTTGAGAGATGAGGTTGCAAAGAAA
GCTTCTGTTGTTGAGAGTTTAGAGAAATCCATAGGTGAAAAAGATGAAAAATTGTCTGAA
TTGGAACAAGAGATGTGTGAAAAGCAAAAGACTTTGGAGAGTGAAGTGGGTGAATTGAGA
GATTTGGTTAAGGAATATGAATGTAAGTTGAGCAGTTCAGAATCAAAGCTGGAAATGCAA
AGATCATTACTTGCTGAGCAATTGAAATATGTTACGAAAATACACGAACAGATTTATAAT
GCTGTTAAGGTTGTTGATGCCAGGAAGGCATCTGAGTTATCGGAATCCTTGTTTCTTGCT
CAAGAGATGGACATGGAAGAGAATATAAGGGCAGTTTTAGCAGGATTGGAATCTATACAT
GAAATGAGTGAATTTGTTGTGCAGAAAACAAGGGATTTGCTAGAGGAGAAGAGCCATGAA
GTGAAAAGCTTAAATGAGTCTGTTTCTCAGTTAGTAAAAGAAAAAGAACAAATTGGGTCT
TTACTTAGAAGTGCTCTTTCAAAGAGAATTTCAGTGGATTTATCATCCAAAACAAATGAA
TTGTTTAAGATAGCAGAAAATGGATTGAGAGAAGCTGGGATAAATTACAAGTTCAACAAT
CACGTTGGTGATGGTAAGATCACTGCTTCTGATAATAAAATGCATGCAGCAAATAATGAA
GAGGATGAAGTATATGCTTTGGCTGGTGCATTAGAGAATATAATTAAGCAGTCTCAGGTT
GAGATCATTGACCTTAAACATACTGTTGAAGAGCTAAGGGAAGAGTCAAGTTTACTCAAG
GAACATGTGGAAACTCAAGCGAAGGAACTCAGTCAATGGAAGCAACGTGTGGAGGAACTT
GAAGAGAAGGAGAGGGTGGCAAATGAAAATGTTGAAGGGCTTATGCTGGACATCACTGCT
GCTGAAGAAGAAATTACACGATGGAAAGTAGCTGCACAGCAAGAAGCTGCTGCAGGTAAA
GCTGTTGAGCAAGAGTGTGCAGCACAGTTGGCAGCTGTACGCCAGGAGCTTGAGGCAGCG
AAGGAGGCTGTACTAGAGTCCGGGAAGAAGCTAAAATTCAAAGAAGAAACAGCTGATGCA
GCCATGGCTGCAAGGGATGCAGCTGAGAAATCATTGAGATTGGCAGATTTAAGAGCATCA
AGGCTGAGGGATAAAGTTGAAGAGCTCACCCGTCAGCTTGAAGAGCTAGATGGCAGGGAA
ACATCAACAACTGGTCTAAACAGGCCAAGATACATGTGCTGGCCATGGCAATGGCTTGGC
TTAGATTCCGTAGGTATGAGACGTGTAGAGACACAACAAGAGGGTGCCAATGAAATGGAA
CTTTCTGAACCCCTTCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400020780
PEP Infomation

pacid=37441866 transcript=PGSC0003DMT400030611 locus=PGSC0003DMG400011723 ID=PGSC0003DMT400030611.v4.03 annot-version=v4.03
Sequence

MSNAGEEDNDDVLSDVEADDPVPIDIINSPSPEDVSIEKFREILAELDRERQARLAAEDS
KSQLQVSFNRLRVLAHDAIKKRDEHSRQRDEALREKEEASTTVEKVTEELKEVTKQRDEF
SKELEELKKAKDSMRTEMETSGSMLVSGIDKISGKVSQFKNFVAGGLPRSQKYTGLPAVA
YGVIKRTNDIVEELLRQIESTGKSRNEAREQMDHRNYEIAIEVSQLESTISGLRDEVAKK
ASVVESLEKSIGEKDEKLSELEQEMCEKQKTLESEVGELRDLVKEYECKLSSSESKLEMQ
RSLLAEQLKYVTKIHEQIYNAVKVVDARKASELSESLFLAQEMDMEENIRAVLAGLESIH
EMSEFVVQKTRDLLEEKSHEVKSLNESVSQLVKEKEQIGSLLRSALSKRISVDLSSKTNE
LFKIAENGLREAGINYKFNNHVGDGKITASDNKMHAANNEEDEVYALAGALENIIKQSQV
EIIDLKHTVEELREESSLLKEHVETQAKELSQWKQRVEELEEKERVANENVEGLMLDITA
AEEEITRWKVAAQQEAAAGKAVEQECAAQLAAVRQELEAAKEAVLESGKKLKFKEETADA
AMAARDAAEKSLRLADLRASRLRDKVEELTRQLEELDGRETSTTGLNRPRYMCWPWQWLG
LDSVGMRRVETQQEGANEMELSEPLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400030611
Transcript Infomation

pacid=37441866 locus=PGSC0003DMG400011723 ID=PGSC0003DMT400030611.v4.03 annot-version=v4.03
Sequence

ATGTCGAACGCCGGTGAAGAAGATAACGATGATGTATTGAGCGACGTAGAGGCCGATGAT
CCGGTACCTATTGATATAATTAATTCTCCCTCACCAGAAGATGTCTCAATTGAGAAATTC
CGTGAGATTCTCGCCGAGCTGGATCGGGAGCGGCAAGCTCGATTAGCAGCTGAGGATTCT
AAATCGCAGTTGCAAGTTTCGTTCAACAGATTGAGAGTTCTCGCTCATGATGCGATCAAA
AAGCGGGATGAGCACTCGAGACAACGCGATGAAGCATTGCGGGAAAAGGAAGAAGCTTCG
ACAACAGTTGAAAAGGTAACGGAGGAATTGAAGGAAGTAACTAAGCAGAGAGATGAATTT
TCAAAGGAGTTAGAGGAATTGAAAAAGGCAAAAGATTCAATGAGAACTGAGATGGAAACT
TCAGGTTCAATGTTAGTTAGTGGAATTGATAAGATATCTGGAAAAGTTAGTCAATTTAAG
AATTTTGTAGCTGGTGGATTACCTAGGTCACAGAAATACACAGGATTACCAGCAGTGGCT
TATGGGGTGATCAAAAGGACGAATGACATTGTAGAGGAGCTATTGAGACAGATTGAATCA
ACAGGAAAGTCAAGAAATGAAGCCCGTGAACAAATGGACCATAGGAATTATGAAATTGCA
ATTGAAGTTTCACAGTTAGAGTCAACAATTAGTGGTTTGAGAGATGAGGTTGCAAAGAAA
GCTTCTGTTGTTGAGAGTTTAGAGAAATCCATAGGTGAAAAAGATGAAAAATTGTCTGAA
TTGGAACAAGAGATGTGTGAAAAGCAAAAGACTTTGGAGAGTGAAGTGGGTGAATTGAGA
GATTTGGTTAAGGAATATGAATGTAAGTTGAGCAGTTCAGAATCAAAGCTGGAAATGCAA
AGATCATTACTTGCTGAGCAATTGAAATATGTTACGAAAATACACGAACAGATTTATAAT
GCTGTTAAGGTTGTTGATGCCAGGAAGGCATCTGAGTTATCGGAATCCTTGTTTCTTGCT
CAAGAGATGGACATGGAAGAGAATATAAGGGCAGTTTTAGCAGGATTGGAATCTATACAT
GAAATGAGTGAATTTGTTGTGCAGAAAACAAGGGATTTGCTAGAGGAGAAGAGCCATGAA
GTGAAAAGCTTAAATGAGTCTGTTTCTCAGTTAGTAAAAGAAAAAGAACAAATTGGGTCT
TTACTTAGAAGTGCTCTTTCAAAGAGAATTTCAGTGGATTTATCATCCAAAACAAATGAA
TTGTTTAAGATAGCAGAAAATGGATTGAGAGAAGCTGGGATAAATTACAAGTTCAACAAT
CACGTTGGTGATGGTAAGATCACTGCTTCTGATAATAAAATGCATGCAGCAAATAATGAA
GAGGATGAAGTATATGCTTTGGCTGGTGCATTAGAGAATATAATTAAGCAGTCTCAGGTT
GAGATCATTGACCTTAAACATACTGTTGAAGAGCTAAGGGAAGAGTCAAGTTTACTCAAG
GAACATGTGGAAACTCAAGCGAAGGAACTCAGTCAATGGAAGCAACGTGTGGAGGAACTT
GAAGAGAAGGAGAGGGTGGCAAATGAAAATGTTGAAGGGCTTATGCTGGACATCACTGCT
GCTGAAGAAGAAATTACACGATGGAAAGTAGCTGCACAGCAAGAAGCTGCTGCAGGTAAA
GCTGTTGAGCAAGAGTGTGCAGCACAGTTGGCAGCTGTACGCCAGGAGCTTGAGGCAGCG
AAGGAGGCTGTACTAGAGTCCGGGAAGAAGCTAAAATTCAAAGAAGAAACAGCTGATGCA
GCCATGGCTGCAAGGGATGCAGCTGAGAAATCATTGAGATTGGCAGATTTAAGAGCATCA
AGGCTGAGGGATAAAGTTGAAGAGCTCACCCGTCAGCTTGAAGAGCTAGATGGCAGGGAA
ACATCAACAACTGGTCTAAACAGGCCAAGATACATGTGCTGGCCATGGCAATGGCTTGGC
TTAGATTCCGTAGGTATGAGACGTGTAGAGACACAACAAGAGGGTGCCAATGAAATGGAA
CTTTCTGAACCCCTTCTTTGA