Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030553
CDS Infomation

pacid=37438680 polypeptide=PGSC0003DMP400020745 locus=PGSC0003DMG400011701 ID=PGSC0003DMT400030553.v4.03 annot-version=v4.03
Sequence

ATGGTTTCTGCAGAAACTAAACCTAATAGTTCATCAAATTTCAAATTAATTGATGGAAGA
AAATTGTCTTACAAAGAAAGAGGTGTTCCAAAGGAAAAATCAAATTACAGAATTATATTT
ATTCATGGATTTGACAGCTCCAAAGAAAGGGATTTTCTTGCACCCCAGGAACTTATGAAC
ACGATGGGAGTGTATATCGTTCAATTCGATCGAGCTGGATATGGAGGAAGTGATCCTAAT
CTGAAACGATCGTTAAGGAGTGAAGCATCAGATATTGAAGAACTAGCAAATCACTTGGAA
TTGGGATCCAAATTTCACATAATTGGTTTCTCCATGGGATCTTACCCAACCTGGAGTTGC
ATTAAACACCTATCACATAGGTTAGCAGGGGTGGCATTTGTGGTTCCCATTGTCAATTAC
CAATGGCCTTCTCTACCGGAATCTGTATTAAAGGACGATGAACGGAAGAAGTGGTACAAA
AGGATGACTTTGGTTGCAAGATATGCTCCTAAGTTATTGCATTGGTGGATGATCCGAAAA
ACGTCTCAATCCTCCTCTACCGATAGTACAAAACCTACATACTTTACGGACAAGGACTTG
GAGCTTTTGAAGAATGCACCTGGATTTCAATTTCTTACCGCGGACAAGCTAAAGAGCAGA
AGTGTTTTCAACAACCTCCGTAGTGACTTCCTTGTGGCGTTTAGTAAATGGGATTTTGAT
CCTTTGGAGCTTAGCAATCCTTTCCCTGAAAACGATAAACGTCCTGTTCACATCTGGCAC
GGGTGTGAAGACAGATTTATCAATTTGAAACTACAAAGACATGTCTCAGAAAGGTTACCT
TGGATTCAATATCACGAAGTTCACGATGGTGGACATTTATTGATCTATGATACCGCGGTC
TGTGAAGCCATCTTAAAGTCTCTTTTGCTTGGAGTGGACACACCACTCTATACACCTAAA
TTTACCTCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400020745
PEP Infomation

pacid=37438680 transcript=PGSC0003DMT400030553 locus=PGSC0003DMG400011701 ID=PGSC0003DMT400030553.v4.03 annot-version=v4.03
Sequence

MVSAETKPNSSSNFKLIDGRKLSYKERGVPKEKSNYRIIFIHGFDSSKERDFLAPQELMN
TMGVYIVQFDRAGYGGSDPNLKRSLRSEASDIEELANHLELGSKFHIIGFSMGSYPTWSC
IKHLSHRLAGVAFVVPIVNYQWPSLPESVLKDDERKKWYKRMTLVARYAPKLLHWWMIRK
TSQSSSTDSTKPTYFTDKDLELLKNAPGFQFLTADKLKSRSVFNNLRSDFLVAFSKWDFD
PLELSNPFPENDKRPVHIWHGCEDRFINLKLQRHVSERLPWIQYHEVHDGGHLLIYDTAV
CEAILKSLLLGVDTPLYTPKFTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400030553
Transcript Infomation

pacid=37438680 locus=PGSC0003DMG400011701 ID=PGSC0003DMT400030553.v4.03 annot-version=v4.03
Sequence

ATGGTTTCTGCAGAAACTAAACCTAATAGTTCATCAAATTTCAAATTAATTGATGGAAGA
AAATTGTCTTACAAAGAAAGAGGTGTTCCAAAGGAAAAATCAAATTACAGAATTATATTT
ATTCATGGATTTGACAGCTCCAAAGAAAGGGATTTTCTTGCACCCCAGGAACTTATGAAC
ACGATGGGAGTGTATATCGTTCAATTCGATCGAGCTGGATATGGAGGAAGTGATCCTAAT
CTGAAACGATCGTTAAGGAGTGAAGCATCAGATATTGAAGAACTAGCAAATCACTTGGAA
TTGGGATCCAAATTTCACATAATTGGTTTCTCCATGGGATCTTACCCAACCTGGAGTTGC
ATTAAACACCTATCACATAGGTTAGCAGGGGTGGCATTTGTGGTTCCCATTGTCAATTAC
CAATGGCCTTCTCTACCGGAATCTGTATTAAAGGACGATGAACGGAAGAAGTGGTACAAA
AGGATGACTTTGGTTGCAAGATATGCTCCTAAGTTATTGCATTGGTGGATGATCCGAAAA
ACGTCTCAATCCTCCTCTACCGATAGTACAAAACCTACATACTTTACGGACAAGGACTTG
GAGCTTTTGAAGAATGCACCTGGATTTCAATTTCTTACCGCGGACAAGCTAAAGAGCAGA
AGTGTTTTCAACAACCTCCGTAGTGACTTCCTTGTGGCGTTTAGTAAATGGGATTTTGAT
CCTTTGGAGCTTAGCAATCCTTTCCCTGAAAACGATAAACGTCCTGTTCACATCTGGCAC
GGGTGTGAAGACAGATTTATCAATTTGAAACTACAAAGACATGTCTCAGAAAGGTTACCT
TGGATTCAATATCACGAAGTTCACGATGGTGGACATTTATTGATCTATGATACCGCGGTC
TGTGAAGCCATCTTAAAGTCTCTTTTGCTTGGAGTGGACACACCACTCTATACACCTAAA
TTTACCTCCTGA