Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030542
CDS Infomation

pacid=37438650 polypeptide=PGSC0003DMP400020738 locus=PGSC0003DMG400011697 ID=PGSC0003DMT400030542.v4.03 annot-version=v4.03
Sequence

ATGGCAGGTCCTAAAACGCCTCCGTACTATAGCCCAACGTACAAGAAGAATGGAGCAAAC
TACCCGTCTTCACCTCATTCAATACGAATCAATGTATATACATTGGCTATCGCGTTTACT
GTCCTCTGTTCTATCGCGTATTTGATAGGCAGAGGATCCATTTCCACCTCCCCTGTTTCT
AATGTTGCTACTTCTGTCCCCTGCATTCCTTTAAAAATCACTTCTGCTACCACTGCAGTT
TCCAAAAATTCTTCGTCTGGTACACAAGTTGATGAGGAAGGTGAAGGCGCGGTATCTGAT
GATGTTAAAGTTTATCCGTCATGTGACTTTAAATTTAGTGAGTATACGCCTTGTGAAGAT
CCTCAACGATCGTTGAAATTCAAGAGGGATAGATTGATTTATAGGGAGAGGCATTGTCCT
GACAAGACTCAGTTGTTGAAATGTCGTGTACCAGCGCCTTATGGTTATAAGAAGCCGTTT
AAGTGGCCTAAGAGTAGGGATTTGGCGTGGTACGCCAATGTACCTCACAAGGAATTGACA
GTGGAGAAGGCGGTTCAAAATTGGATTCGAAAAGAAGGAGATAAGTTTAGGTTCCCTGGT
GGAGGGACTATGTTTCCTAATGGTGCCGATGCCTACGTTGATGACATTGATAAGTTGATC
AATCTTAAAGATGGTTCCATTAGGACCGCCATTGACACGGGCTGTGGGGTGGCGAGTTGG
GGAGCTTATCTTCTATCGCGAGATATTTTAGCAATGTCATTTGCACCTAGAGATACACAT
GAAGCACAAGTTCAATTTGCTCTTGAGCGAGGCGTTCCTGCATTGATTGGAGTGCTCGCG
TCTAAGAGGCTTCCCTATCCATCTAGAGCTTTTGACATGGCTCATTGCTCTCGTTGCCTT
ATTCCTTGGGACCTATATGATGGCGCGTACTTAATGGAAGTCGATAGAGTCTTGAGGCCC
GGTGGATATTGGATACTCTCCGGTCCACCAATCCGTTGGAGGAAATATTTCAAAGGCTGG
GAAAGAACCAGAGATGACCTTAACGGTGAGCAAACCCGAATTGAAGAGGTAGCTAAGAAA
CTCTGCTGGAAAAAATTCGTCGAAAAAGATGACATTGCAATATGGCAAAAGCCCTACAAT
CATTTCCAGTGCAAAGAACAAAAGAAGAAACTAATGTGTCCTGCCCAAGATTATGATAAA
GCCTGGTACACGGAGCTTGAAACGTGTATAACTCCCTTGCCCGAAGTGTCAAGTGATGAA
GATGTGGCTGGAGGACAATTGGAAAAATGGCCTAAAAGATTGAACGCGATACCACCAAGG
ATCAGCAGTGGAACTGTGAAAGGGGTGACGGCTGGATCATTCGAAAAAGATTCACAGCTA
TGGCAGAAGAGAGTTTCTTATTACAAGAGTGTTGACGACAAACTTAATCAACCAGGGAGA
TATAGAAATCTACTAGACATGAATGCTAACCTTGGTGGTTTTGCTGCTAATTGGGTTGAT
GATCCTGTTTGGGTAATGAATATTGTTCCTGCTGAAGCAGAGGTCAATACACTTGGTGTC
ATTTATGAAAGAGGATTGATTGGAACATATCAAAGCTGGTGTGAAGCTATGTCAACTTAC
CCAAGAACGTATGATCTTCTTCATGCTGATTCAATATTTACTATGTACAAAGAGAGATGT
GACATGGAAGACATATTACTAGAAATGGATAGAATATTAAGGCCAGAAGGAAGTATAATA
ATACGTGAGGATGTAGATATATTGGTTGAAGTAAAGAGGATTGTAGATGGGCTAAATTGG
GAGAGTTTAATTGTGGATCATGAAGATGGCCCAATGGAAAGAGAAAAACTTCTATTTGCA
GTGAAGACATATTGGACTGCACCAGCAAACACCACCACAAGCCCAAGGATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400020738
PEP Infomation

pacid=37438650 transcript=PGSC0003DMT400030542 locus=PGSC0003DMG400011697 ID=PGSC0003DMT400030542.v4.03 annot-version=v4.03
Sequence

MAGPKTPPYYSPTYKKNGANYPSSPHSIRINVYTLAIAFTVLCSIAYLIGRGSISTSPVS
NVATSVPCIPLKITSATTAVSKNSSSGTQVDEEGEGAVSDDVKVYPSCDFKFSEYTPCED
PQRSLKFKRDRLIYRERHCPDKTQLLKCRVPAPYGYKKPFKWPKSRDLAWYANVPHKELT
VEKAVQNWIRKEGDKFRFPGGGTMFPNGADAYVDDIDKLINLKDGSIRTAIDTGCGVASW
GAYLLSRDILAMSFAPRDTHEAQVQFALERGVPALIGVLASKRLPYPSRAFDMAHCSRCL
IPWDLYDGAYLMEVDRVLRPGGYWILSGPPIRWRKYFKGWERTRDDLNGEQTRIEEVAKK
LCWKKFVEKDDIAIWQKPYNHFQCKEQKKKLMCPAQDYDKAWYTELETCITPLPEVSSDE
DVAGGQLEKWPKRLNAIPPRISSGTVKGVTAGSFEKDSQLWQKRVSYYKSVDDKLNQPGR
YRNLLDMNANLGGFAANWVDDPVWVMNIVPAEAEVNTLGVIYERGLIGTYQSWCEAMSTY
PRTYDLLHADSIFTMYKERCDMEDILLEMDRILRPEGSIIIREDVDILVEVKRIVDGLNW
ESLIVDHEDGPMEREKLLFAVKTYWTAPANTTTSPRI*

Transcript Sequence

Transcript ID

PGSC0003DMT400030542
Transcript Infomation

pacid=37438650 locus=PGSC0003DMG400011697 ID=PGSC0003DMT400030542.v4.03 annot-version=v4.03
Sequence

ATGGCAGGTCCTAAAACGCCTCCGTACTATAGCCCAACGTACAAGAAGAATGGAGCAAAC
TACCCGTCTTCACCTCATTCAATACGAATCAATGTATATACATTGGCTATCGCGTTTACT
GTCCTCTGTTCTATCGCGTATTTGATAGGCAGAGGATCCATTTCCACCTCCCCTGTTTCT
AATGTTGCTACTTCTGTCCCCTGCATTCCTTTAAAAATCACTTCTGCTACCACTGCAGTT
TCCAAAAATTCTTCGTCTGGTACACAAGTTGATGAGGAAGGTGAAGGCGCGGTATCTGAT
GATGTTAAAGTTTATCCGTCATGTGACTTTAAATTTAGTGAGTATACGCCTTGTGAAGAT
CCTCAACGATCGTTGAAATTCAAGAGGGATAGATTGATTTATAGGGAGAGGCATTGTCCT
GACAAGACTCAGTTGTTGAAATGTCGTGTACCAGCGCCTTATGGTTATAAGAAGCCGTTT
AAGTGGCCTAAGAGTAGGGATTTGGCGTGGTACGCCAATGTACCTCACAAGGAATTGACA
GTGGAGAAGGCGGTTCAAAATTGGATTCGAAAAGAAGGAGATAAGTTTAGGTTCCCTGGT
GGAGGGACTATGTTTCCTAATGGTGCCGATGCCTACGTTGATGACATTGATAAGTTGATC
AATCTTAAAGATGGTTCCATTAGGACCGCCATTGACACGGGCTGTGGGGTGGCGAGTTGG
GGAGCTTATCTTCTATCGCGAGATATTTTAGCAATGTCATTTGCACCTAGAGATACACAT
GAAGCACAAGTTCAATTTGCTCTTGAGCGAGGCGTTCCTGCATTGATTGGAGTGCTCGCG
TCTAAGAGGCTTCCCTATCCATCTAGAGCTTTTGACATGGCTCATTGCTCTCGTTGCCTT
ATTCCTTGGGACCTATATGATGGCGCGTACTTAATGGAAGTCGATAGAGTCTTGAGGCCC
GGTGGATATTGGATACTCTCCGGTCCACCAATCCGTTGGAGGAAATATTTCAAAGGCTGG
GAAAGAACCAGAGATGACCTTAACGGTGAGCAAACCCGAATTGAAGAGGTAGCTAAGAAA
CTCTGCTGGAAAAAATTCGTCGAAAAAGATGACATTGCAATATGGCAAAAGCCCTACAAT
CATTTCCAGTGCAAAGAACAAAAGAAGAAACTAATGTGTCCTGCCCAAGATTATGATAAA
GCCTGGTACACGGAGCTTGAAACGTGTATAACTCCCTTGCCCGAAGTGTCAAGTGATGAA
GATGTGGCTGGAGGACAATTGGAAAAATGGCCTAAAAGATTGAACGCGATACCACCAAGG
ATCAGCAGTGGAACTGTGAAAGGGGTGACGGCTGGATCATTCGAAAAAGATTCACAGCTA
TGGCAGAAGAGAGTTTCTTATTACAAGAGTGTTGACGACAAACTTAATCAACCAGGGAGA
TATAGAAATCTACTAGACATGAATGCTAACCTTGGTGGTTTTGCTGCTAATTGGGTTGAT
GATCCTGTTTGGGTAATGAATATTGTTCCTGCTGAAGCAGAGGTCAATACACTTGGTGTC
ATTTATGAAAGAGGATTGATTGGAACATATCAAAGCTGGTGTGAAGCTATGTCAACTTAC
CCAAGAACGTATGATCTTCTTCATGCTGATTCAATATTTACTATGTACAAAGAGAGATGT
GACATGGAAGACATATTACTAGAAATGGATAGAATATTAAGGCCAGAAGGAAGTATAATA
ATACGTGAGGATGTAGATATATTGGTTGAAGTAAAGAGGATTGTAGATGGGCTAAATTGG
GAGAGTTTAATTGTGGATCATGAAGATGGCCCAATGGAAAGAGAAAAACTTCTATTTGCA
GTGAAGACATATTGGACTGCACCAGCAAACACCACCACAAGCCCAAGGATCTAA